RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 BCL11AQ9H165 835 aa15.46■□□□□ 0.06
UBE2O-204ENST00000587127 SETD5Q9C0A6 1442 aa15.45■□□□□ 0.06
UBE2O-204ENST00000587127 PPP1R15AO75807 674 aaPredicted RBP15.45■□□□□ 0.06
UBE2O-204ENST00000587127 PHLDB1Q86UU1 1377 aa15.44■□□□□ 0.06
UBE2O-204ENST00000587127 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
UBE2O-204ENST00000587127 ATP1B4Q9UN42 357 aaPredicted RBP15.44■□□□□ 0.06
UBE2O-204ENST00000587127 RBM19Q9Y4C8 960 aaKnown RBP15.4■□□□□ 0.06
UBE2O-204ENST00000587127 TIAM1Q13009 1591 aa15.39■□□□□ 0.05
UBE2O-204ENST00000587127 IGF1RP08069 1367 aa15.38■□□□□ 0.05
UBE2O-204ENST00000587127 NEFLP07196 543 aa15.38■□□□□ 0.05
UBE2O-204ENST00000587127 LRRC9Q6ZRR7 1453 aa15.36■□□□□ 0.05
UBE2O-204ENST00000587127 ANP32CO43423 234 aa15.35■□□□□ 0.05
UBE2O-204ENST00000587127 CARMIL1Q5VZK9 1371 aa15.32■□□□□ 0.04
UBE2O-204ENST00000587127 CFTRP13569 1480 aa15.31■□□□□ 0.04
UBE2O-204ENST00000587127 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
UBE2O-204ENST00000587127 CCER2I3L3R5 266 aa15.3■□□□□ 0.04
UBE2O-204ENST00000587127 IRX6P78412 446 aaPredicted RBP15.3■□□□□ 0.04
UBE2O-204ENST00000587127 MAP3K1Q13233 1512 aa15.27■□□□□ 0.03
UBE2O-204ENST00000587127 MSH5O43196 834 aa15.26■□□□□ 0.03
UBE2O-204ENST00000587127 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
UBE2O-204ENST00000587127 FHOD3Q2V2M9 1422 aa15.25■□□□□ 0.03
UBE2O-204ENST00000587127 TIMELESSQ9UNS1 1208 aa15.25■□□□□ 0.03
UBE2O-204ENST00000587127 PCF11O94913 1555 aaKnown RBP15.24■□□□□ 0.03
UBE2O-204ENST00000587127 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
UBE2O-204ENST00000587127 HNRNPUQ00839 825 aaKnown RBP eCLIP15.22■□□□□ 0.03
UBE2O-204ENST00000587127 FHAD1B1AJZ9 1412 aa15.21■□□□□ 0.03
UBE2O-204ENST00000587127 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
UBE2O-204ENST00000587127 SLC24A1O60721 1099 aa15.19■□□□□ 0.02
UBE2O-204ENST00000587127 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
UBE2O-204ENST00000587127 CFAP43Q8NDM7 1665 aa15.16■□□□□ 0.02
UBE2O-204ENST00000587127 CCDC18Q5T9S5 1454 aa15.15■□□□□ 0.02
UBE2O-204ENST00000587127 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
UBE2O-204ENST00000587127 FGD6Q6ZV73 1430 aa15.13■□□□□ 0.01
UBE2O-204ENST00000587127 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.012e-7■■■■■ 45.7
UBE2O-204ENST00000587127 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
UBE2O-204ENST00000587127 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
UBE2O-204ENST00000587127 CDK11AQ9UQ88 783 aaPredicted RBP15.1■□□□□ 0.01
UBE2O-204ENST00000587127 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
UBE2O-204ENST00000587127 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
UBE2O-204ENST00000587127 HSPA5P11021 654 aaKnown RBP15.09■□□□□ 0.01
UBE2O-204ENST00000587127 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
UBE2O-204ENST00000587127 UACAQ9BZF9 1416 aa15.09■□□□□ 0.01
UBE2O-204ENST00000587127 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
UBE2O-204ENST00000587127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.08■□□□□ 0
UBE2O-204ENST00000587127 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
UBE2O-204ENST00000587127 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0
UBE2O-204ENST00000587127 HFM1A2PYH4 1435 aa15.07■□□□□ 0
UBE2O-204ENST00000587127 NAIPQ13075 1403 aa15.06■□□□□ 0
UBE2O-204ENST00000587127 KDM5BQ9UGL1 1544 aa15.06■□□□□ 0
UBE2O-204ENST00000587127 FANCIQ9NVI1 1328 aa15.05■□□□□ -0
UBE2O-204ENST00000587127 PTPN23Q9H3S7 1636 aa15.04■□□□□ -0
UBE2O-204ENST00000587127 FAM9BQ8IZU0 186 aa15.04■□□□□ -0
UBE2O-204ENST00000587127 ERICH6Q7L0X2 663 aa15.04■□□□□ -0
UBE2O-204ENST00000587127 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
UBE2O-204ENST00000587127 B4GALNT3Q6L9W6 998 aa15.03■□□□□ -0
UBE2O-204ENST00000587127 FOXD1Q16676 465 aa15.01□□□□□ -0.01
UBE2O-204ENST00000587127 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
UBE2O-204ENST00000587127 SNAPC4Q5SXM2 1469 aa15□□□□□ -0.01
UBE2O-204ENST00000587127 NCOA2Q15596 1464 aa15□□□□□ -0.01
UBE2O-204ENST00000587127 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
UBE2O-204ENST00000587127 PPP4R2Q9NY27 417 aa14.99□□□□□ -0.01
UBE2O-204ENST00000587127 FANCD2Q9BXW9 1451 aa14.99□□□□□ -0.01
UBE2O-204ENST00000587127 FMN1Q68DA7 1419 aa14.99□□□□□ -0.01
UBE2O-204ENST00000587127 EIF4G2P78344 907 aaKnown RBP eCLIP14.98□□□□□ -0.01
UBE2O-204ENST00000587127 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
UBE2O-204ENST00000587127 MYOM3Q5VTT5 1437 aa14.97□□□□□ -0.01
UBE2O-204ENST00000587127 MRS2Q9HD23 443 aa14.96□□□□□ -0.01
UBE2O-204ENST00000587127 L3MBTL2Q969R5 705 aa14.96□□□□□ -0.01
UBE2O-204ENST00000587127 DENND4BO75064 1496 aaPredicted RBP14.96□□□□□ -0.01
UBE2O-204ENST00000587127 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
UBE2O-204ENST00000587127 PRKRIP1Q9H875 184 aaPredicted RBP14.95□□□□□ -0.02
UBE2O-204ENST00000587127 SENP3-EIF4A1A0A087X0R7 540 aa14.95□□□□□ -0.02
UBE2O-204ENST00000587127 ARID3CA6NKF2 412 aa14.95□□□□□ -0.02
UBE2O-204ENST00000587127 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
UBE2O-204ENST00000587127 CNTLNQ9NXG0 1405 aa14.94□□□□□ -0.02
UBE2O-204ENST00000587127 LRRIQ1Q96JM4 1722 aa14.92□□□□□ -0.02
UBE2O-204ENST00000587127 MPHOSPH9Q99550 1183 aa14.91□□□□□ -0.02
UBE2O-204ENST00000587127 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
UBE2O-204ENST00000587127 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
UBE2O-204ENST00000587127 CCDC7Q96M83 1385 aa14.91□□□□□ -0.02
UBE2O-204ENST00000587127 NBPF8Q3BBV2 869 aa14.91□□□□□ -0.02
UBE2O-204ENST00000587127 KDM6BO15054 1643 aa14.91□□□□□ -0.02
UBE2O-204ENST00000587127 CTTNBP2Q8WZ74 1663 aa14.89□□□□□ -0.03
UBE2O-204ENST00000587127 NESP48681 1621 aa14.89□□□□□ -0.03
UBE2O-204ENST00000587127 MAGI3Q5TCQ9 1506 aa14.89□□□□□ -0.03
UBE2O-204ENST00000587127 ERICH6BQ5W0A0 696 aa14.89□□□□□ -0.03
UBE2O-204ENST00000587127 GRIN2BQ13224 1484 aa14.88□□□□□ -0.03
UBE2O-204ENST00000587127 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
UBE2O-204ENST00000587127 ZBED9Q6R2W3 1325 aa14.88□□□□□ -0.03
UBE2O-204ENST00000587127 NCOA1Q15788 1441 aa14.86□□□□□ -0.03
UBE2O-204ENST00000587127 PAK3O75914 559 aaPredicted RBP14.86□□□□□ -0.03
UBE2O-204ENST00000587127 NBR1Q14596 966 aa14.85□□□□□ -0.03
UBE2O-204ENST00000587127 CC2D2AQ9P2K1 1620 aa14.85□□□□□ -0.03
UBE2O-204ENST00000587127 KIF7Q2M1P5 1343 aa14.85□□□□□ -0.03
UBE2O-204ENST00000587127 SUPT6HQ7KZ85 1726 aaKnown RBP14.85□□□□□ -0.03
UBE2O-204ENST00000587127 DEKP35659 375 aaKnown RBP14.85□□□□□ -0.03
UBE2O-204ENST00000587127 CUL7Q14999 1698 aa14.85□□□□□ -0.03
UBE2O-204ENST00000587127 POLR3GLQ9BT43 218 aa14.84□□□□□ -0.03
UBE2O-204ENST00000587127 UGGT2Q9NYU1 1516 aa14.84□□□□□ -0.03
UBE2O-204ENST00000587127 AKNAQ7Z591 1439 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms