RNA–Protein interactions for RNA: ENST00000585316.2

ZNF488-201, Transcript of zinc finger protein 488, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZNF488, Length 3,496 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF488-201ENST00000585316 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
ZNF488-201ENST00000585316 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
ZNF488-201ENST00000585316 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.33
ZNF488-201ENST00000585316 DIEXFQ68CQ4 756 aaKnown RBP17.08■□□□□ 0.32
ZNF488-201ENST00000585316 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
ZNF488-201ENST00000585316 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
ZNF488-201ENST00000585316 TNIKQ9UKE5 1360 aa17.06■□□□□ 0.32
ZNF488-201ENST00000585316 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
ZNF488-201ENST00000585316 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
ZNF488-201ENST00000585316 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
ZNF488-201ENST00000585316 WDR62O43379 1518 aa17.03■□□□□ 0.32
ZNF488-201ENST00000585316 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
ZNF488-201ENST00000585316 KCNH8Q96L42 1107 aa17■□□□□ 0.31
ZNF488-201ENST00000585316 PRXQ9BXM0 1461 aa16.99■□□□□ 0.31
ZNF488-201ENST00000585316 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
ZNF488-201ENST00000585316 CYB5RLQ6IPT4 315 aa16.97■□□□□ 0.31
ZNF488-201ENST00000585316 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
ZNF488-201ENST00000585316 EIF4G3O43432 1585 aaKnown RBP16.96■□□□□ 0.31
ZNF488-201ENST00000585316 FAM50AQ14320 339 aaKnown RBP16.95■□□□□ 0.3
ZNF488-201ENST00000585316 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
ZNF488-201ENST00000585316 FHAD1B1AJZ9 1412 aa16.94■□□□□ 0.3
ZNF488-201ENST00000585316 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
ZNF488-201ENST00000585316 ARAP1Q96P48 1450 aa16.85■□□□□ 0.29
ZNF488-201ENST00000585316 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
ZNF488-201ENST00000585316 GRIN2AQ12879 1464 aa16.83■□□□□ 0.29
ZNF488-201ENST00000585316 SYNJ2O15056 1496 aa16.81■□□□□ 0.28
ZNF488-201ENST00000585316 ARHGAP35Q9NRY4 1499 aa16.81■□□□□ 0.28
ZNF488-201ENST00000585316 KIF21BO75037 1637 aa16.81■□□□□ 0.28
ZNF488-201ENST00000585316 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
ZNF488-201ENST00000585316 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
ZNF488-201ENST00000585316 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
ZNF488-201ENST00000585316 CHIC2Q9UKJ5 165 aa16.79■□□□□ 0.28
ZNF488-201ENST00000585316 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
ZNF488-201ENST00000585316 MTUS2Q5JR59 1369 aa16.76■□□□□ 0.27
ZNF488-201ENST00000585316 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
ZNF488-201ENST00000585316 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
ZNF488-201ENST00000585316 NPM1P06748 294 aaKnown RBP eCLIP16.74■□□□□ 0.27
ZNF488-201ENST00000585316 ADAMTS12P58397 1594 aa16.73■□□□□ 0.27
ZNF488-201ENST00000585316 PTPRGP23470 1445 aa16.72■□□□□ 0.27
ZNF488-201ENST00000585316 MIER1Q8N108 512 aa16.71■□□□□ 0.26
ZNF488-201ENST00000585316 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
ZNF488-201ENST00000585316 WDR97A6NE52 1622 aa16.69■□□□□ 0.26
ZNF488-201ENST00000585316 PLEKHD1A6NEE1 506 aa16.69■□□□□ 0.26
ZNF488-201ENST00000585316 PLB1Q6P1J6 1458 aa16.68■□□□□ 0.26
ZNF488-201ENST00000585316 CUL7Q14999 1698 aa16.68■□□□□ 0.26
ZNF488-201ENST00000585316 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
ZNF488-201ENST00000585316 KIAA0586Q9BVV6 1533 aa16.66■□□□□ 0.26
ZNF488-201ENST00000585316 IQGAP2Q13576 1575 aa16.66■□□□□ 0.26
ZNF488-201ENST00000585316 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
ZNF488-201ENST00000585316 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
ZNF488-201ENST00000585316 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
ZNF488-201ENST00000585316 CHD1O14646 1710 aa16.63■□□□□ 0.25
ZNF488-201ENST00000585316 PRKCSHP14314 528 aaPredicted RBP16.63■□□□□ 0.25
ZNF488-201ENST00000585316 ERCC6L2Q5T890 1561 aa16.62■□□□□ 0.25
ZNF488-201ENST00000585316 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
ZNF488-201ENST00000585316 BCANQ96GW7 911 aa16.6■□□□□ 0.25
ZNF488-201ENST00000585316 ZNF644Q9H582 1327 aaPredicted RBP16.6■□□□□ 0.25
ZNF488-201ENST00000585316 RRP7BPQ9NSQ0 103 aa16.6■□□□□ 0.25
ZNF488-201ENST00000585316 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
ZNF488-201ENST00000585316 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.25
ZNF488-201ENST00000585316 CFDP1Q9UEE9 299 aaPredicted RBP16.55■□□□□ 0.24
ZNF488-201ENST00000585316 NUP160Q12769 1436 aa16.53■□□□□ 0.24
ZNF488-201ENST00000585316 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
ZNF488-201ENST00000585316 DISP1Q96F81 1524 aa16.52■□□□□ 0.23
ZNF488-201ENST00000585316 TRIM52Q96A61 297 aa16.52■□□□□ 0.23
ZNF488-201ENST00000585316 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
ZNF488-201ENST00000585316 CTTNBP2Q8WZ74 1663 aa16.51■□□□□ 0.23
ZNF488-201ENST00000585316 HNRNPMP52272 730 aaKnown RBP eCLIP16.5■□□□□ 0.23
ZNF488-201ENST00000585316 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
ZNF488-201ENST00000585316 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
ZNF488-201ENST00000585316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.23
ZNF488-201ENST00000585316 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
ZNF488-201ENST00000585316 FAM69CQ0P6D2 419 aa16.44■□□□□ 0.22
ZNF488-201ENST00000585316 CASKIN1Q8WXD9 1431 aa16.43■□□□□ 0.22
ZNF488-201ENST00000585316 KIAA0556O60303 1618 aa16.41■□□□□ 0.22
ZNF488-201ENST00000585316 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
ZNF488-201ENST00000585316 EPRSP07814 1512 aaKnown RBP16.39■□□□□ 0.21
ZNF488-201ENST00000585316 ANP32EQ9BTT0 268 aa16.39■□□□□ 0.21
ZNF488-201ENST00000585316 EFCAB5A4FU69 1503 aa16.38■□□□□ 0.21
ZNF488-201ENST00000585316 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
ZNF488-201ENST00000585316 SUPT16HQ9Y5B9 1047 aaKnown RBP16.38■□□□□ 0.21
ZNF488-201ENST00000585316 NUP153P49790 1475 aaKnown RBP16.37■□□□□ 0.21
ZNF488-201ENST00000585316 UGGT2Q9NYU1 1516 aa16.37■□□□□ 0.21
ZNF488-201ENST00000585316 FOXD1Q16676 465 aa16.36■□□□□ 0.21
ZNF488-201ENST00000585316 TSHZ2Q9NRE2 1034 aa16.36■□□□□ 0.21
ZNF488-201ENST00000585316 MLECQ14165 292 aa16.35■□□□□ 0.21
ZNF488-201ENST00000585316 AFAP1Q8N556 730 aa16.35■□□□□ 0.21
ZNF488-201ENST00000585316 ATP10BO94823 1461 aa16.34■□□□□ 0.21
ZNF488-201ENST00000585316 TSPY4P0CV99 314 aa16.34■□□□□ 0.21
ZNF488-201ENST00000585316 TSPY10P0CW01 314 aa16.34■□□□□ 0.21
ZNF488-201ENST00000585316 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.21
ZNF488-201ENST00000585316 ARHGEF11O15085 1522 aa16.33■□□□□ 0.2
ZNF488-201ENST00000585316 NCOA2Q15596 1464 aa16.32■□□□□ 0.2
ZNF488-201ENST00000585316 RAPGEF3O95398 923 aa16.31■□□□□ 0.2
ZNF488-201ENST00000585316 TIAM1Q13009 1591 aa16.31■□□□□ 0.2
ZNF488-201ENST00000585316 SAMD9Q5K651 1589 aa16.29■□□□□ 0.2
ZNF488-201ENST00000585316 CCDC18Q5T9S5 1454 aa16.28■□□□□ 0.2
ZNF488-201ENST00000585316 MAGI3Q5TCQ9 1506 aa16.27■□□□□ 0.19
ZNF488-201ENST00000585316 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.19
ZNF488-201ENST00000585316 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms