RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
CDK5RAP3-237ENST00000585163 MAPKBP1O60336 1514 aa20.62■□□□□ 0.89
CDK5RAP3-237ENST00000585163 CFAP43Q8NDM7 1665 aa20.61■□□□□ 0.89
CDK5RAP3-237ENST00000585163 PHLDB1Q86UU1 1377 aa20.6■□□□□ 0.89
CDK5RAP3-237ENST00000585163 SETD5Q9C0A6 1442 aa20.59■□□□□ 0.89
CDK5RAP3-237ENST00000585163 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.89
CDK5RAP3-237ENST00000585163 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.89
CDK5RAP3-237ENST00000585163 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
CDK5RAP3-237ENST00000585163 RAD54L2Q9Y4B4 1467 aa20.53■□□□□ 0.88
CDK5RAP3-237ENST00000585163 EFCAB5A4FU69 1503 aa20.53■□□□□ 0.88
CDK5RAP3-237ENST00000585163 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
CDK5RAP3-237ENST00000585163 TOPBP1Q92547 1522 aa20.52■□□□□ 0.88
CDK5RAP3-237ENST00000585163 FYCO1Q9BQS8 1478 aa20.51■□□□□ 0.87
CDK5RAP3-237ENST00000585163 P3H3Q8IVL6 736 aa20.5■□□□□ 0.87
CDK5RAP3-237ENST00000585163 CUL7Q14999 1698 aa20.49■□□□□ 0.87
CDK5RAP3-237ENST00000585163 FHOD3Q2V2M9 1422 aa20.49■□□□□ 0.87
CDK5RAP3-237ENST00000585163 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.871e-7■■■■□ 24.7
CDK5RAP3-237ENST00000585163 FAM50AQ14320 339 aaKnown RBP20.48■□□□□ 0.87
CDK5RAP3-237ENST00000585163 CASKIN1Q8WXD9 1431 aa20.48■□□□□ 0.87
CDK5RAP3-237ENST00000585163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.46■□□□□ 0.87
CDK5RAP3-237ENST00000585163 CTTNBP2Q8WZ74 1663 aa20.46■□□□□ 0.87
CDK5RAP3-237ENST00000585163 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
CDK5RAP3-237ENST00000585163 NESP48681 1621 aa20.42■□□□□ 0.86
CDK5RAP3-237ENST00000585163 TIMELESSQ9UNS1 1208 aa20.41■□□□□ 0.86
CDK5RAP3-237ENST00000585163 WDR97A6NE52 1622 aa20.4■□□□□ 0.86
CDK5RAP3-237ENST00000585163 FMN1Q68DA7 1419 aa20.39■□□□□ 0.86
CDK5RAP3-237ENST00000585163 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
CDK5RAP3-237ENST00000585163 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
CDK5RAP3-237ENST00000585163 LAMC3Q9Y6N6 1575 aa20.34■□□□□ 0.85
CDK5RAP3-237ENST00000585163 FGD6Q6ZV73 1430 aa20.34■□□□□ 0.85
CDK5RAP3-237ENST00000585163 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.85
CDK5RAP3-237ENST00000585163 SUPT16HQ9Y5B9 1047 aaKnown RBP20.32■□□□□ 0.84
CDK5RAP3-237ENST00000585163 SAMD9Q5K651 1589 aa20.31■□□□□ 0.84
CDK5RAP3-237ENST00000585163 ABCA5Q8WWZ7 1642 aa20.3■□□□□ 0.84
CDK5RAP3-237ENST00000585163 PPP1R15AO75807 674 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-237ENST00000585163 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
CDK5RAP3-237ENST00000585163 KCNH8Q96L42 1107 aa20.26■□□□□ 0.83
CDK5RAP3-237ENST00000585163 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
CDK5RAP3-237ENST00000585163 GAPVD1Q14C86 1478 aa20.25■□□□□ 0.83
CDK5RAP3-237ENST00000585163 LRRIQ1Q96JM4 1722 aa20.25■□□□□ 0.83
CDK5RAP3-237ENST00000585163 TDRD9Q8NDG6 1382 aaKnown RBP20.25■□□□□ 0.83
CDK5RAP3-237ENST00000585163 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
CDK5RAP3-237ENST00000585163 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
CDK5RAP3-237ENST00000585163 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
CDK5RAP3-237ENST00000585163 THOC2Q8NI27 1593 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-237ENST00000585163 PTPRKQ15262 1439 aa20.22■□□□□ 0.83
CDK5RAP3-237ENST00000585163 NCOA2Q15596 1464 aa20.21■□□□□ 0.83
CDK5RAP3-237ENST00000585163 UACAQ9BZF9 1416 aa20.21■□□□□ 0.83
CDK5RAP3-237ENST00000585163 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
CDK5RAP3-237ENST00000585163 MYOM3Q5VTT5 1437 aa20.2■□□□□ 0.82
CDK5RAP3-237ENST00000585163 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
CDK5RAP3-237ENST00000585163 SUPT6HQ7KZ85 1726 aaKnown RBP20.18■□□□□ 0.82
CDK5RAP3-237ENST00000585163 EHBP1L1Q8N3D4 1523 aa20.17■□□□□ 0.82
CDK5RAP3-237ENST00000585163 NAIPQ13075 1403 aa20.16■□□□□ 0.82
CDK5RAP3-237ENST00000585163 TONSLQ96HA7 1378 aa20.16■□□□□ 0.82
CDK5RAP3-237ENST00000585163 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
CDK5RAP3-237ENST00000585163 PRKCSHP14314 528 aaPredicted RBP20.14■□□□□ 0.81
CDK5RAP3-237ENST00000585163 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
CDK5RAP3-237ENST00000585163 UGGT2Q9NYU1 1516 aa20.12■□□□□ 0.81
CDK5RAP3-237ENST00000585163 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
CDK5RAP3-237ENST00000585163 CCER2I3L3R5 266 aa20.11■□□□□ 0.81
CDK5RAP3-237ENST00000585163 TARBP1Q13395 1621 aaKnown RBP20.11■□□□□ 0.81
CDK5RAP3-237ENST00000585163 MAGI3Q5TCQ9 1506 aa20.09■□□□□ 0.81
CDK5RAP3-237ENST00000585163 ANP32CO43423 234 aa20.07■□□□□ 0.8
CDK5RAP3-237ENST00000585163 TCOF1Q13428 1488 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-237ENST00000585163 KDM5BQ9UGL1 1544 aa20.04■□□□□ 0.8
CDK5RAP3-237ENST00000585163 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
CDK5RAP3-237ENST00000585163 PBRM1Q86U86 1689 aa20.01■□□□□ 0.79
CDK5RAP3-237ENST00000585163 GCC2Q8IWJ2 1684 aa20.01■□□□□ 0.79
CDK5RAP3-237ENST00000585163 IQGAP2Q13576 1575 aa20.01■□□□□ 0.79
CDK5RAP3-237ENST00000585163 AKNAQ7Z591 1439 aa20■□□□□ 0.79
CDK5RAP3-237ENST00000585163 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
CDK5RAP3-237ENST00000585163 EPRSP07814 1512 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP3-237ENST00000585163 TSHZ2Q9NRE2 1034 aa19.99■□□□□ 0.79
CDK5RAP3-237ENST00000585163 RRP7BPQ9NSQ0 103 aa19.97■□□□□ 0.79
CDK5RAP3-237ENST00000585163 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
CDK5RAP3-237ENST00000585163 MIA2Q96PC5 1412 aa19.96■□□□□ 0.79
CDK5RAP3-237ENST00000585163 DENND4BO75064 1496 aaPredicted RBP19.96■□□□□ 0.79
CDK5RAP3-237ENST00000585163 FKBP8Q14318 412 aa19.95■□□□□ 0.78
CDK5RAP3-237ENST00000585163 WDR62O43379 1518 aa19.93■□□□□ 0.78
CDK5RAP3-237ENST00000585163 CHIC2Q9UKJ5 165 aa19.93■□□□□ 0.78
CDK5RAP3-237ENST00000585163 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
CDK5RAP3-237ENST00000585163 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
CDK5RAP3-237ENST00000585163 KDM6BO15054 1643 aa19.91■□□□□ 0.78
CDK5RAP3-237ENST00000585163 BCANQ96GW7 911 aa19.89■□□□□ 0.77
CDK5RAP3-237ENST00000585163 NEFLP07196 543 aa19.86■□□□□ 0.77
CDK5RAP3-237ENST00000585163 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
CDK5RAP3-237ENST00000585163 MPHOSPH9Q99550 1183 aa19.86■□□□□ 0.77
CDK5RAP3-237ENST00000585163 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
CDK5RAP3-237ENST00000585163 WASHC2AQ641Q2 1341 aa19.84■□□□□ 0.77
CDK5RAP3-237ENST00000585163 ROCK1Q13464 1354 aa19.82■□□□□ 0.76
CDK5RAP3-237ENST00000585163 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
CDK5RAP3-237ENST00000585163 DAPK1P53355 1430 aa19.8■□□□□ 0.76
CDK5RAP3-237ENST00000585163 ERICH6Q7L0X2 663 aa19.79■□□□□ 0.76
CDK5RAP3-237ENST00000585163 KIAA0586Q9BVV6 1533 aa19.79■□□□□ 0.76
CDK5RAP3-237ENST00000585163 KIAA0556O60303 1618 aa19.79■□□□□ 0.76
CDK5RAP3-237ENST00000585163 DNMT1P26358 1616 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP3-237ENST00000585163 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
CDK5RAP3-237ENST00000585163 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
CDK5RAP3-237ENST00000585163 DISP1Q96F81 1524 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms