RNA–Protein interactions for RNA: ENST00000583590.5

DDX42-216, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DDX42, Length 4,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-216ENST00000583590 FHOD3Q2V2M9 1422 aa25.93■■□□□ 1.74
DDX42-216ENST00000583590 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
DDX42-216ENST00000583590 FKBP8Q14318 412 aa25.91■■□□□ 1.74
DDX42-216ENST00000583590 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
DDX42-216ENST00000583590 CLSPNQ9HAW4 1339 aa25.87■■□□□ 1.73
DDX42-216ENST00000583590 KCNH8Q96L42 1107 aa25.87■■□□□ 1.73
DDX42-216ENST00000583590 MYT1LQ9UL68 1186 aa25.85■■□□□ 1.73
DDX42-216ENST00000583590 CUX1P39880 1505 aa25.82■■□□□ 1.72
DDX42-216ENST00000583590 RAD54L2Q9Y4B4 1467 aa25.82■■□□□ 1.72
DDX42-216ENST00000583590 FHAD1B1AJZ9 1412 aa25.81■■□□□ 1.72
DDX42-216ENST00000583590 FGD5Q6ZNL6 1462 aa25.81■■□□□ 1.72
DDX42-216ENST00000583590 SETD5Q9C0A6 1442 aa25.8■■□□□ 1.72
DDX42-216ENST00000583590 HNRNPUQ00839 825 aaKnown RBP eCLIP25.78■■□□□ 1.72
DDX42-216ENST00000583590 SENP3-EIF4A1A0A087X0R7 540 aa25.78■■□□□ 1.72
DDX42-216ENST00000583590 PRXQ9BXM0 1461 aa25.78■■□□□ 1.72
DDX42-216ENST00000583590 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
DDX42-216ENST00000583590 FANCD2Q9BXW9 1451 aa25.76■■□□□ 1.71
DDX42-216ENST00000583590 FOXD1Q16676 465 aa25.75■■□□□ 1.71
DDX42-216ENST00000583590 ERICH6Q7L0X2 663 aa25.74■■□□□ 1.71
DDX42-216ENST00000583590 CFTRP13569 1480 aa25.74■■□□□ 1.71
DDX42-216ENST00000583590 IRX6P78412 446 aaPredicted RBP25.73■■□□□ 1.71
DDX42-216ENST00000583590 ARHGAP35Q9NRY4 1499 aa25.73■■□□□ 1.71
DDX42-216ENST00000583590 FAM9BQ8IZU0 186 aa25.73■■□□□ 1.71
DDX42-216ENST00000583590 CHMP7Q8WUX9 453 aaPredicted RBP25.73■■□□□ 1.71
DDX42-216ENST00000583590 CDK11AQ9UQ88 783 aaPredicted RBP25.72■■□□□ 1.71
DDX42-216ENST00000583590 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
DDX42-216ENST00000583590 PHLDB1Q86UU1 1377 aa25.68■■□□□ 1.7
DDX42-216ENST00000583590 NESP48681 1621 aa25.67■■□□□ 1.7
DDX42-216ENST00000583590 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
DDX42-216ENST00000583590 SLC4A1APQ9BWU0 796 aaKnown RBP25.65■■□□□ 1.7
DDX42-216ENST00000583590 SUPT16HQ9Y5B9 1047 aaKnown RBP25.63■■□□□ 1.69
DDX42-216ENST00000583590 KDM2AQ9Y2K7 1162 aa25.61■■□□□ 1.69
DDX42-216ENST00000583590 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
DDX42-216ENST00000583590 PPP1R15AO75807 674 aaPredicted RBP25.56■■□□□ 1.68
DDX42-216ENST00000583590 EIF4G2P78344 907 aaKnown RBP eCLIP25.55■■□□□ 1.687e-6■□□□□ 9.1
DDX42-216ENST00000583590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.52■■□□□ 1.686e-7■■□□□ 13.1
DDX42-216ENST00000583590 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
DDX42-216ENST00000583590 CFDP1Q9UEE9 299 aaPredicted RBP25.51■■□□□ 1.67
DDX42-216ENST00000583590 MRS2Q9HD23 443 aa25.49■■□□□ 1.67
DDX42-216ENST00000583590 SALL2Q9Y467 1007 aaPredicted RBP25.49■■□□□ 1.67
DDX42-216ENST00000583590 FMN1Q68DA7 1419 aa25.49■■□□□ 1.67
DDX42-216ENST00000583590 PDS5BQ9NTI5 1447 aa25.47■■□□□ 1.67
DDX42-216ENST00000583590 LRRC9Q6ZRR7 1453 aa25.47■■□□□ 1.67
DDX42-216ENST00000583590 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
DDX42-216ENST00000583590 CC2D2AQ9P2K1 1620 aa25.41■■□□□ 1.66
DDX42-216ENST00000583590 HSPA5P11021 654 aaKnown RBP25.4■■□□□ 1.66
DDX42-216ENST00000583590 TSPY4P0CV99 314 aa25.4■■□□□ 1.66
DDX42-216ENST00000583590 TSPY10P0CW01 314 aa25.4■■□□□ 1.66
DDX42-216ENST00000583590 RGL3Q3MIN7 710 aa25.37■■□□□ 1.65
DDX42-216ENST00000583590 MPHOSPH9Q99550 1183 aa25.36■■□□□ 1.65
DDX42-216ENST00000583590 PLEKHD1A6NEE1 506 aa25.36■■□□□ 1.65
DDX42-216ENST00000583590 POLA1P09884 1462 aaPredicted RBP25.34■■□□□ 1.65
DDX42-216ENST00000583590 TIMELESSQ9UNS1 1208 aa25.33■■□□□ 1.65
DDX42-216ENST00000583590 GAPVD1Q14C86 1478 aa25.33■■□□□ 1.65
DDX42-216ENST00000583590 L3MBTL2Q969R5 705 aa25.33■■□□□ 1.64
DDX42-216ENST00000583590 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.648e-7■■■■□ 26.5
DDX42-216ENST00000583590 ZNF644Q9H582 1327 aaPredicted RBP25.3■■□□□ 1.64
DDX42-216ENST00000583590 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
DDX42-216ENST00000583590 MYT1Q01538 1121 aa25.3■■□□□ 1.64
DDX42-216ENST00000583590 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
DDX42-216ENST00000583590 TOPBP1Q92547 1522 aa25.29■■□□□ 1.64
DDX42-216ENST00000583590 FGD6Q6ZV73 1430 aa25.27■■□□□ 1.64
DDX42-216ENST00000583590 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
DDX42-216ENST00000583590 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
DDX42-216ENST00000583590 TMC1Q8TDI8 760 aa25.23■■□□□ 1.63
DDX42-216ENST00000583590 PKD2Q13563 968 aa25.19■■□□□ 1.62
DDX42-216ENST00000583590 CASKIN1Q8WXD9 1431 aa25.19■■□□□ 1.62
DDX42-216ENST00000583590 CARD11Q9BXL7 1154 aa25.16■■□□□ 1.62
DDX42-216ENST00000583590 CCER2I3L3R5 266 aa25.14■■□□□ 1.62
DDX42-216ENST00000583590 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
DDX42-216ENST00000583590 NCOA2Q15596 1464 aa25.13■■□□□ 1.61
DDX42-216ENST00000583590 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
DDX42-216ENST00000583590 PCF11O94913 1555 aaKnown RBP25.11■■□□□ 1.61
DDX42-216ENST00000583590 DCAF11Q8TEB1 546 aa25.11■■□□□ 1.61
DDX42-216ENST00000583590 MYOM3Q5VTT5 1437 aa25.1■■□□□ 1.61
DDX42-216ENST00000583590 JPH4Q96JJ6 628 aa25.08■■□□□ 1.61
DDX42-216ENST00000583590 TSHZ2Q9NRE2 1034 aa25.08■■□□□ 1.61
DDX42-216ENST00000583590 HNRNPMP52272 730 aaKnown RBP eCLIP25.07■■□□□ 1.66e-6■■■■□ 20.3
DDX42-216ENST00000583590 FYCO1Q9BQS8 1478 aa25.06■■□□□ 1.6
DDX42-216ENST00000583590 CHGAP10645 457 aaKnown RBP25.05■■□□□ 1.6
DDX42-216ENST00000583590 DNMBPQ6XZF7 1577 aa25.04■■□□□ 1.6
DDX42-216ENST00000583590 B4GALNT3Q6L9W6 998 aa25.04■■□□□ 1.6
DDX42-216ENST00000583590 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
DDX42-216ENST00000583590 UACAQ9BZF9 1416 aa25.01■■□□□ 1.59
DDX42-216ENST00000583590 NUP155O75694 1391 aa24.99■■□□□ 1.59
DDX42-216ENST00000583590 CCDC136Q96JN2 1154 aa24.98■■□□□ 1.59
DDX42-216ENST00000583590 URB2Q14146 1524 aaKnown RBP24.97■■□□□ 1.59
DDX42-216ENST00000583590 NPM2Q86SE8 214 aaKnown RBP24.96■■□□□ 1.59
DDX42-216ENST00000583590 WASHC2AQ641Q2 1341 aa24.95■■□□□ 1.58
DDX42-216ENST00000583590 MAPKBP1O60336 1514 aa24.9■■□□□ 1.58
DDX42-216ENST00000583590 CC2D1BQ5T0F9 858 aaKnown RBP24.89■■□□□ 1.58
DDX42-216ENST00000583590 PTPRKQ15262 1439 aa24.89■■□□□ 1.58
DDX42-216ENST00000583590 CCDC184Q52MB2 194 aa24.89■■□□□ 1.58
DDX42-216ENST00000583590 CDK13Q14004 1512 aaKnown RBP24.89■■□□□ 1.58
DDX42-216ENST00000583590 NAIPQ13075 1403 aa24.89■■□□□ 1.58
DDX42-216ENST00000583590 RBM19Q9Y4C8 960 aaKnown RBP24.88■■□□□ 1.57
DDX42-216ENST00000583590 EFCAB5A4FU69 1503 aa24.88■■□□□ 1.57
DDX42-216ENST00000583590 NBPF8Q3BBV2 869 aa24.88■■□□□ 1.57
DDX42-216ENST00000583590 HFM1A2PYH4 1435 aa24.87■■□□□ 1.57
DDX42-216ENST00000583590 PRKRIP1Q9H875 184 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms