RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 RIMBP3BA6NNM3 1639 aa15.14■□□□□ 0.01
PPP4R1-225ENST00000583438 RIMBP3Q9UFD9 1639 aa15.14■□□□□ 0.01
PPP4R1-225ENST00000583438 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
PPP4R1-225ENST00000583438 CCDC88BA6NC98 1476 aa15.13■□□□□ 0.01
PPP4R1-225ENST00000583438 EIF4G3O43432 1585 aaKnown RBP15.08■□□□□ 0
PPP4R1-225ENST00000583438 TOPBP1Q92547 1522 aa15.07■□□□□ 0
PPP4R1-225ENST00000583438 CHD1O14646 1710 aa15.06■□□□□ 0
PPP4R1-225ENST00000583438 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
PPP4R1-225ENST00000583438 OSCARQ8IYS5 282 aa15.03■□□□□ -0
PPP4R1-225ENST00000583438 ARHGEF11O15085 1522 aa15.01□□□□□ -0.01
PPP4R1-225ENST00000583438 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
PPP4R1-225ENST00000583438 DNMBPQ6XZF7 1577 aa15□□□□□ -0.01
PPP4R1-225ENST00000583438 PROM2Q8N271 834 aa14.94□□□□□ -0.02
PPP4R1-225ENST00000583438 AQRO60306 1485 aaKnown RBP eCLIP14.92□□□□□ -0.024e-6■□□□□ 9.6
PPP4R1-225ENST00000583438 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
PPP4R1-225ENST00000583438 ARAP1Q96P48 1450 aa14.89□□□□□ -0.03
PPP4R1-225ENST00000583438 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
PPP4R1-225ENST00000583438 SPDYE2BA6NHP3 402 aa14.88□□□□□ -0.03
PPP4R1-225ENST00000583438 SPDYE6P0CI01 402 aa14.88□□□□□ -0.03
PPP4R1-225ENST00000583438 SPDYE2Q495Y8 402 aa14.88□□□□□ -0.03
PPP4R1-225ENST00000583438 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
PPP4R1-225ENST00000583438 WDR97A6NE52 1622 aa14.86□□□□□ -0.03
PPP4R1-225ENST00000583438 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
PPP4R1-225ENST00000583438 CUX1P39880 1505 aa14.82□□□□□ -0.04
PPP4R1-225ENST00000583438 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
PPP4R1-225ENST00000583438 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
PPP4R1-225ENST00000583438 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
PPP4R1-225ENST00000583438 SNAPC4Q5SXM2 1469 aa14.78□□□□□ -0.04
PPP4R1-225ENST00000583438 PBRM1Q86U86 1689 aa14.77□□□□□ -0.04
PPP4R1-225ENST00000583438 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
PPP4R1-225ENST00000583438 CYB5RLQ6IPT4 315 aa14.75□□□□□ -0.05
PPP4R1-225ENST00000583438 SOGA1O94964 1423 aa14.74□□□□□ -0.05
PPP4R1-225ENST00000583438 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
PPP4R1-225ENST00000583438 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
PPP4R1-225ENST00000583438 SYNJ1O43426 1573 aa14.66□□□□□ -0.06
PPP4R1-225ENST00000583438 ERCC6L2Q5T890 1561 aa14.66□□□□□ -0.06
PPP4R1-225ENST00000583438 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
PPP4R1-225ENST00000583438 GRIN2BQ13224 1484 aa14.63□□□□□ -0.07
PPP4R1-225ENST00000583438 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
PPP4R1-225ENST00000583438 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
PPP4R1-225ENST00000583438 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
PPP4R1-225ENST00000583438 GAPVD1Q14C86 1478 aa14.58□□□□□ -0.08
PPP4R1-225ENST00000583438 CEP170Q5SW79 1584 aa14.58□□□□□ -0.08
PPP4R1-225ENST00000583438 ADAMTS12P58397 1594 aa14.57□□□□□ -0.08
PPP4R1-225ENST00000583438 VASPP50552 380 aaPredicted RBP14.57□□□□□ -0.08
PPP4R1-225ENST00000583438 BIVM-ERCC5R4GMW8 1640 aa14.56□□□□□ -0.08
PPP4R1-225ENST00000583438 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
PPP4R1-225ENST00000583438 SHROOM2Q13796 1616 aa14.53□□□□□ -0.08
PPP4R1-225ENST00000583438 CHMP7Q8WUX9 453 aaPredicted RBP14.52□□□□□ -0.09
PPP4R1-225ENST00000583438 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
PPP4R1-225ENST00000583438 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
PPP4R1-225ENST00000583438 RTN4Q9NQC3 1192 aaKnown RBP14.49□□□□□ -0.09
PPP4R1-225ENST00000583438 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
PPP4R1-225ENST00000583438 NUP160Q12769 1436 aa14.48□□□□□ -0.09
PPP4R1-225ENST00000583438 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
PPP4R1-225ENST00000583438 AMER1Q5JTC6 1135 aaPredicted RBP14.45□□□□□ -0.1
PPP4R1-225ENST00000583438 IFNLR1Q8IU57 520 aaPredicted RBP14.43□□□□□ -0.1
PPP4R1-225ENST00000583438 REM2Q8IYK8 340 aaPredicted RBP14.43□□□□□ -0.1
PPP4R1-225ENST00000583438 SUPT5HO00267 1087 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-225ENST00000583438 RUSC2Q8N2Y8 1516 aa14.39□□□□□ -0.11
PPP4R1-225ENST00000583438 WRNQ14191 1432 aaPredicted RBP eCLIP14.39□□□□□ -0.11
PPP4R1-225ENST00000583438 ERICH3Q5RHP9 1530 aa14.38□□□□□ -0.11
PPP4R1-225ENST00000583438 SPDYE1Q8NFV5 336 aaPredicted RBP14.37□□□□□ -0.11
PPP4R1-225ENST00000583438 FHAD1B1AJZ9 1412 aa14.36□□□□□ -0.11
PPP4R1-225ENST00000583438 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
PPP4R1-225ENST00000583438 ADCY10Q96PN6 1610 aa14.31□□□□□ -0.12
PPP4R1-225ENST00000583438 MIER1Q8N108 512 aa14.31□□□□□ -0.12
PPP4R1-225ENST00000583438 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
PPP4R1-225ENST00000583438 PRG4Q92954 1404 aaPredicted RBP14.28□□□□□ -0.12
PPP4R1-225ENST00000583438 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
PPP4R1-225ENST00000583438 DIP2BQ9P265 1576 aa14.26□□□□□ -0.13
PPP4R1-225ENST00000583438 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
PPP4R1-225ENST00000583438 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
PPP4R1-225ENST00000583438 TSPOAP1O95153 1857 aa14.22□□□□□ -0.13
PPP4R1-225ENST00000583438 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
PPP4R1-225ENST00000583438 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
PPP4R1-225ENST00000583438 CUL7Q14999 1698 aa14.18□□□□□ -0.14
PPP4R1-225ENST00000583438 JPH4Q96JJ6 628 aa14.18□□□□□ -0.14
PPP4R1-225ENST00000583438 PPRC1Q5VV67 1664 aaKnown RBP14.17□□□□□ -0.14
PPP4R1-225ENST00000583438 SPOCK2Q92563 424 aa14.17□□□□□ -0.14
PPP4R1-225ENST00000583438 PLEKHG5O94827 1062 aa14.15□□□□□ -0.14
PPP4R1-225ENST00000583438 CREBZFQ9NS37 354 aa14.15□□□□□ -0.14
PPP4R1-225ENST00000583438 IGF1RP08069 1367 aa14.14□□□□□ -0.15
PPP4R1-225ENST00000583438 KIAA0586Q9BVV6 1533 aa14.13□□□□□ -0.15
PPP4R1-225ENST00000583438 KDM6BO15054 1643 aa14.1□□□□□ -0.15
PPP4R1-225ENST00000583438 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
PPP4R1-225ENST00000583438 FAM69CQ0P6D2 419 aa14.07□□□□□ -0.16
PPP4R1-225ENST00000583438 ABCC2Q92887 1545 aa14.05□□□□□ -0.16
PPP4R1-225ENST00000583438 PKD2Q13563 968 aa14.05□□□□□ -0.16
PPP4R1-225ENST00000583438 KIF27Q86VH2 1401 aa14.05□□□□□ -0.16
PPP4R1-225ENST00000583438 IQGAP2Q13576 1575 aa14.05□□□□□ -0.16
PPP4R1-225ENST00000583438 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
PPP4R1-225ENST00000583438 DISP1Q96F81 1524 aa14.04□□□□□ -0.16
PPP4R1-225ENST00000583438 KDM4FA0A1W2PPD8 638 aa14.02□□□□□ -0.17
PPP4R1-225ENST00000583438 CHADLQ6NUI6 762 aa14□□□□□ -0.17
PPP4R1-225ENST00000583438 ZCCHC11Q5TAX3 1644 aaKnown RBP14□□□□□ -0.17
PPP4R1-225ENST00000583438 COL17A1Q9UMD9 1497 aaPredicted RBP13.99□□□□□ -0.17
PPP4R1-225ENST00000583438 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
PPP4R1-225ENST00000583438 MAP3K4Q9Y6R4 1608 aa13.99□□□□□ -0.17
PPP4R1-225ENST00000583438 GLI2P10070 1586 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms