RNA–Protein interactions for RNA: ENST00000582783.5

C19orf47-208, Transcript of chromosome 19 open reading frame 47, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C19orf47, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-208ENST00000582783 PRXQ9BXM0 1461 aa18.14■□□□□ 0.49
C19orf47-208ENST00000582783 SIN3AQ96ST3 1273 aa18.13■□□□□ 0.49
C19orf47-208ENST00000582783 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
C19orf47-208ENST00000582783 CCNB3Q8WWL7 1395 aa18.1■□□□□ 0.49
C19orf47-208ENST00000582783 ZNF777Q9ULD5 760 aaPredicted RBP18.1■□□□□ 0.49
C19orf47-208ENST00000582783 RRP7BPQ9NSQ0 103 aa18.09■□□□□ 0.49
C19orf47-208ENST00000582783 ARHGAP35Q9NRY4 1499 aa18.07■□□□□ 0.48
C19orf47-208ENST00000582783 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
C19orf47-208ENST00000582783 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
C19orf47-208ENST00000582783 POLR3GLQ9BT43 218 aa18.02■□□□□ 0.48
C19orf47-208ENST00000582783 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
C19orf47-208ENST00000582783 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
C19orf47-208ENST00000582783 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
C19orf47-208ENST00000582783 AQRO60306 1485 aaKnown RBP eCLIP17.97■□□□□ 0.472e-6■■■■■ 30.8
C19orf47-208ENST00000582783 DDX10Q13206 875 aaKnown RBP17.97■□□□□ 0.47
C19orf47-208ENST00000582783 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
C19orf47-208ENST00000582783 RAB3GAP2Q9H2M9 1393 aa17.95■□□□□ 0.46
C19orf47-208ENST00000582783 ZNF326Q5BKZ1 582 aaKnown RBP17.95■□□□□ 0.46
C19orf47-208ENST00000582783 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
C19orf47-208ENST00000582783 PHLDB1Q86UU1 1377 aa17.93■□□□□ 0.46
C19orf47-208ENST00000582783 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
C19orf47-208ENST00000582783 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
C19orf47-208ENST00000582783 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
C19orf47-208ENST00000582783 FOXD1Q16676 465 aa17.88■□□□□ 0.45
C19orf47-208ENST00000582783 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
C19orf47-208ENST00000582783 MYT1LQ9UL68 1186 aa17.82■□□□□ 0.44
C19orf47-208ENST00000582783 TONSLQ96HA7 1378 aa17.82■□□□□ 0.44
C19orf47-208ENST00000582783 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
C19orf47-208ENST00000582783 SETD5Q9C0A6 1442 aa17.8■□□□□ 0.44
C19orf47-208ENST00000582783 LRRC9Q6ZRR7 1453 aa17.78■□□□□ 0.44
C19orf47-208ENST00000582783 BCANQ96GW7 911 aa17.78■□□□□ 0.44
C19orf47-208ENST00000582783 FMN1Q68DA7 1419 aa17.76■□□□□ 0.43
C19orf47-208ENST00000582783 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
C19orf47-208ENST00000582783 ABCA10Q8WWZ4 1543 aa17.75■□□□□ 0.43
C19orf47-208ENST00000582783 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
C19orf47-208ENST00000582783 ZNF644Q9H582 1327 aaPredicted RBP17.72■□□□□ 0.43
C19orf47-208ENST00000582783 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.42
C19orf47-208ENST00000582783 SENP3-EIF4A1A0A087X0R7 540 aa17.7■□□□□ 0.42
C19orf47-208ENST00000582783 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
C19orf47-208ENST00000582783 MYT1Q01538 1121 aa17.7■□□□□ 0.42
C19orf47-208ENST00000582783 PCF11O94913 1555 aaKnown RBP17.69■□□□□ 0.42
C19orf47-208ENST00000582783 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
C19orf47-208ENST00000582783 TIAM1Q13009 1591 aa17.68■□□□□ 0.42
C19orf47-208ENST00000582783 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
C19orf47-208ENST00000582783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
C19orf47-208ENST00000582783 ANP32CO43423 234 aa17.65■□□□□ 0.42
C19orf47-208ENST00000582783 CLSPNQ9HAW4 1339 aa17.65■□□□□ 0.42
C19orf47-208ENST00000582783 LAMC3Q9Y6N6 1575 aa17.64■□□□□ 0.41
C19orf47-208ENST00000582783 JPH4Q96JJ6 628 aa17.64■□□□□ 0.41
C19orf47-208ENST00000582783 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
C19orf47-208ENST00000582783 CASKIN1Q8WXD9 1431 aa17.62■□□□□ 0.41
C19orf47-208ENST00000582783 PLEKHD1A6NEE1 506 aa17.62■□□□□ 0.41
C19orf47-208ENST00000582783 FGD6Q6ZV73 1430 aa17.61■□□□□ 0.41
C19orf47-208ENST00000582783 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
C19orf47-208ENST00000582783 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.4
C19orf47-208ENST00000582783 NCOA2Q15596 1464 aa17.57■□□□□ 0.4
C19orf47-208ENST00000582783 CDK13Q14004 1512 aaKnown RBP17.56■□□□□ 0.4
C19orf47-208ENST00000582783 PPP1R15AO75807 674 aaPredicted RBP17.55■□□□□ 0.4
C19orf47-208ENST00000582783 FYCO1Q9BQS8 1478 aa17.55■□□□□ 0.4
C19orf47-208ENST00000582783 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
C19orf47-208ENST00000582783 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
C19orf47-208ENST00000582783 MPHOSPH9Q99550 1183 aa17.53■□□□□ 0.4
C19orf47-208ENST00000582783 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
C19orf47-208ENST00000582783 TSPY4P0CV99 314 aa17.53■□□□□ 0.4
C19orf47-208ENST00000582783 TSPY10P0CW01 314 aa17.53■□□□□ 0.4
C19orf47-208ENST00000582783 CCDC18Q5T9S5 1454 aa17.52■□□□□ 0.39
C19orf47-208ENST00000582783 RGL3Q3MIN7 710 aa17.52■□□□□ 0.39
C19orf47-208ENST00000582783 NEFLP07196 543 aa17.51■□□□□ 0.39
C19orf47-208ENST00000582783 HNRNPMP52272 730 aaKnown RBP eCLIP17.51■□□□□ 0.39
C19orf47-208ENST00000582783 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
C19orf47-208ENST00000582783 MYOM3Q5VTT5 1437 aa17.5■□□□□ 0.39
C19orf47-208ENST00000582783 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
C19orf47-208ENST00000582783 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
C19orf47-208ENST00000582783 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
C19orf47-208ENST00000582783 EFCAB5A4FU69 1503 aa17.46■□□□□ 0.39
C19orf47-208ENST00000582783 CUL7Q14999 1698 aa17.45■□□□□ 0.38
C19orf47-208ENST00000582783 HNRNPUQ00839 825 aaKnown RBP eCLIP17.45■□□□□ 0.38
C19orf47-208ENST00000582783 HSPA5P11021 654 aaKnown RBP17.45■□□□□ 0.38
C19orf47-208ENST00000582783 IRX6P78412 446 aaPredicted RBP17.45■□□□□ 0.38
C19orf47-208ENST00000582783 PRG4Q92954 1404 aaPredicted RBP17.44■□□□□ 0.38
C19orf47-208ENST00000582783 EIF4G2P78344 907 aaKnown RBP eCLIP17.44■□□□□ 0.38
C19orf47-208ENST00000582783 PKD2Q13563 968 aa17.44■□□□□ 0.38
C19orf47-208ENST00000582783 FKBP8Q14318 412 aa17.43■□□□□ 0.38
C19orf47-208ENST00000582783 WDR97A6NE52 1622 aa17.41■□□□□ 0.38
C19orf47-208ENST00000582783 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
C19orf47-208ENST00000582783 CARMIL2Q6F5E8 1435 aa17.4■□□□□ 0.38
C19orf47-208ENST00000582783 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.38
C19orf47-208ENST00000582783 IQGAP2Q13576 1575 aa17.39■□□□□ 0.37
C19orf47-208ENST00000582783 EPRSP07814 1512 aaKnown RBP17.38■□□□□ 0.37
C19orf47-208ENST00000582783 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
C19orf47-208ENST00000582783 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
C19orf47-208ENST00000582783 NAIPQ13075 1403 aa17.35■□□□□ 0.37
C19orf47-208ENST00000582783 CTTNBP2Q8WZ74 1663 aa17.35■□□□□ 0.37
C19orf47-208ENST00000582783 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.36
C19orf47-208ENST00000582783 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
C19orf47-208ENST00000582783 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
C19orf47-208ENST00000582783 NUP155O75694 1391 aa17.32■□□□□ 0.36
C19orf47-208ENST00000582783 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
C19orf47-208ENST00000582783 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
C19orf47-208ENST00000582783 PTPRGP23470 1445 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms