RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 SYNJ2O15056 1496 aa11.75□□□□□ -0.53
TVP23B-210ENST00000582288 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
TVP23B-210ENST00000582288 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
TVP23B-210ENST00000582288 FGD5Q6ZNL6 1462 aa11.71□□□□□ -0.53
TVP23B-210ENST00000582288 DSG3P32926 999 aa11.7□□□□□ -0.54
TVP23B-210ENST00000582288 CAPN15O75808 1086 aa11.65□□□□□ -0.54
TVP23B-210ENST00000582288 CUX1P39880 1505 aa11.65□□□□□ -0.55
TVP23B-210ENST00000582288 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
TVP23B-210ENST00000582288 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
TVP23B-210ENST00000582288 ABCA5Q8WWZ7 1642 aa11.6□□□□□ -0.55
TVP23B-210ENST00000582288 GRIN2AQ12879 1464 aa11.58□□□□□ -0.56
TVP23B-210ENST00000582288 NUP160Q12769 1436 aa11.58□□□□□ -0.56
TVP23B-210ENST00000582288 ERCC6L2Q5T890 1561 aa11.57□□□□□ -0.56
TVP23B-210ENST00000582288 SHROOM2Q13796 1616 aa11.57□□□□□ -0.56
TVP23B-210ENST00000582288 CEP170Q5SW79 1584 aa11.56□□□□□ -0.56
TVP23B-210ENST00000582288 KIF13AQ9H1H9 1805 aa11.54□□□□□ -0.56
TVP23B-210ENST00000582288 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
TVP23B-210ENST00000582288 SPINK5Q9NQ38 1064 aaPredicted RBP11.54□□□□□ -0.56
TVP23B-210ENST00000582288 ADAMTS12P58397 1594 aa11.52□□□□□ -0.57
TVP23B-210ENST00000582288 FHAD1B1AJZ9 1412 aa11.51□□□□□ -0.57
TVP23B-210ENST00000582288 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
TVP23B-210ENST00000582288 ABCC10Q5T3U5 1492 aa11.49□□□□□ -0.57
TVP23B-210ENST00000582288 WRNQ14191 1432 aaPredicted RBP eCLIP11.48□□□□□ -0.57
TVP23B-210ENST00000582288 MAPKBP1O60336 1514 aa11.47□□□□□ -0.57
TVP23B-210ENST00000582288 ERICH3Q5RHP9 1530 aa11.46□□□□□ -0.57
TVP23B-210ENST00000582288 PRG4Q92954 1404 aaPredicted RBP11.45□□□□□ -0.58
TVP23B-210ENST00000582288 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
TVP23B-210ENST00000582288 FAM69CQ0P6D2 419 aa11.44□□□□□ -0.58
TVP23B-210ENST00000582288 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
TVP23B-210ENST00000582288 KDM4FA0A1W2PPD8 638 aa11.43□□□□□ -0.58
TVP23B-210ENST00000582288 DIP2BQ9P265 1576 aa11.42□□□□□ -0.58
TVP23B-210ENST00000582288 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
TVP23B-210ENST00000582288 KDM6BO15054 1643 aa11.41□□□□□ -0.58
TVP23B-210ENST00000582288 TOP2BQ02880 1626 aa11.4□□□□□ -0.58
TVP23B-210ENST00000582288 BIVM-ERCC5R4GMW8 1640 aa11.4□□□□□ -0.58
TVP23B-210ENST00000582288 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
TVP23B-210ENST00000582288 ADCY10Q96PN6 1610 aa11.36□□□□□ -0.59
TVP23B-210ENST00000582288 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
TVP23B-210ENST00000582288 KIAA0586Q9BVV6 1533 aa11.3□□□□□ -0.6
TVP23B-210ENST00000582288 APLP2Q06481 763 aa11.3□□□□□ -0.6
TVP23B-210ENST00000582288 GLI2P10070 1586 aa11.28□□□□□ -0.6
TVP23B-210ENST00000582288 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
TVP23B-210ENST00000582288 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
TVP23B-210ENST00000582288 TSPOAP1O95153 1857 aa11.27□□□□□ -0.61
TVP23B-210ENST00000582288 ADGRL1O94910 1474 aa11.26□□□□□ -0.61
TVP23B-210ENST00000582288 SP7Q8TDD2 431 aaPredicted RBP11.26□□□□□ -0.61
TVP23B-210ENST00000582288 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
TVP23B-210ENST00000582288 ABCB7O75027 752 aa11.25□□□□□ -0.61
TVP23B-210ENST00000582288 ABCC2Q92887 1545 aa11.25□□□□□ -0.61
TVP23B-210ENST00000582288 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
TVP23B-210ENST00000582288 PTPRGP23470 1445 aa11.24□□□□□ -0.61
TVP23B-210ENST00000582288 PPRC1Q5VV67 1664 aaKnown RBP11.23□□□□□ -0.61
TVP23B-210ENST00000582288 UHRF1BP1LA0JNW5 1464 aa11.22□□□□□ -0.61
TVP23B-210ENST00000582288 CUL7Q14999 1698 aa11.22□□□□□ -0.61
TVP23B-210ENST00000582288 HECW2Q9P2P5 1572 aa11.21□□□□□ -0.61
TVP23B-210ENST00000582288 CARMIL2Q6F5E8 1435 aa11.21□□□□□ -0.61
TVP23B-210ENST00000582288 ASXL2Q76L83 1435 aa11.21□□□□□ -0.61
TVP23B-210ENST00000582288 IGF1RP08069 1367 aa11.21□□□□□ -0.61
TVP23B-210ENST00000582288 TNIKQ9UKE5 1360 aa11.21□□□□□ -0.61
TVP23B-210ENST00000582288 TEX14Q8IWB6 1497 aa11.19□□□□□ -0.62
TVP23B-210ENST00000582288 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
TVP23B-210ENST00000582288 MAP3K4Q9Y6R4 1608 aa11.17□□□□□ -0.62
TVP23B-210ENST00000582288 COL17A1Q9UMD9 1497 aaPredicted RBP11.17□□□□□ -0.62
TVP23B-210ENST00000582288 EPRSP07814 1512 aaKnown RBP11.16□□□□□ -0.62
TVP23B-210ENST00000582288 UACAQ9BZF9 1416 aa11.16□□□□□ -0.62
TVP23B-210ENST00000582288 KDM5BQ9UGL1 1544 aa11.15□□□□□ -0.62
TVP23B-210ENST00000582288 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
TVP23B-210ENST00000582288 FBXO41Q8TF61 875 aa11.13□□□□□ -0.63
TVP23B-210ENST00000582288 IQGAP2Q13576 1575 aa11.11□□□□□ -0.63
TVP23B-210ENST00000582288 CARMIL1Q5VZK9 1371 aa11.11□□□□□ -0.63
TVP23B-210ENST00000582288 DISP1Q96F81 1524 aa11.09□□□□□ -0.63
TVP23B-210ENST00000582288 ZCCHC11Q5TAX3 1644 aaKnown RBP11.08□□□□□ -0.64
TVP23B-210ENST00000582288 MAGI3Q5TCQ9 1506 aa11.08□□□□□ -0.64
TVP23B-210ENST00000582288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.07□□□□□ -0.64
TVP23B-210ENST00000582288 HNRNPUL2Q1KMD3 747 aaKnown RBP11.07□□□□□ -0.64
TVP23B-210ENST00000582288 UGGT2Q9NYU1 1516 aa11.07□□□□□ -0.64
TVP23B-210ENST00000582288 TTBK1Q5TCY1 1321 aaPredicted RBP11.07□□□□□ -0.64
TVP23B-210ENST00000582288 WDR7Q9Y4E6 1490 aa11.06□□□□□ -0.64
TVP23B-210ENST00000582288 CFAP43Q8NDM7 1665 aa11.04□□□□□ -0.64
TVP23B-210ENST00000582288 CD109Q6YHK3 1445 aa11.03□□□□□ -0.64
TVP23B-210ENST00000582288 KIAA0556O60303 1618 aa11.02□□□□□ -0.65
TVP23B-210ENST00000582288 ARAP3Q8WWN8 1544 aa11□□□□□ -0.65
TVP23B-210ENST00000582288 PHLDB1Q86UU1 1377 aa11□□□□□ -0.65
TVP23B-210ENST00000582288 RAPGEF2Q9Y4G8 1499 aa10.99□□□□□ -0.65
TVP23B-210ENST00000582288 KIF21BO75037 1637 aa10.98□□□□□ -0.65
TVP23B-210ENST00000582288 PTPRMP28827 1452 aa10.97□□□□□ -0.65
TVP23B-210ENST00000582288 ADAMTSL3P82987 1691 aa10.96□□□□□ -0.65
TVP23B-210ENST00000582288 GOLGA3Q08378 1498 aa10.96□□□□□ -0.65
TVP23B-210ENST00000582288 ABCA8O94911 1581 aa10.95□□□□□ -0.66
TVP23B-210ENST00000582288 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
TVP23B-210ENST00000582288 PCF11O94913 1555 aaKnown RBP10.93□□□□□ -0.66
TVP23B-210ENST00000582288 KCNH8Q96L42 1107 aa10.92□□□□□ -0.66
TVP23B-210ENST00000582288 LMTK3Q96Q04 1460 aa10.91□□□□□ -0.66
TVP23B-210ENST00000582288 NEO1Q92859 1461 aa10.9□□□□□ -0.66
TVP23B-210ENST00000582288 CTTNBP2Q8WZ74 1663 aa10.89□□□□□ -0.67
TVP23B-210ENST00000582288 ABCA9Q8IUA7 1624 aa10.89□□□□□ -0.67
TVP23B-210ENST00000582288 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
TVP23B-210ENST00000582288 FAM9AQ8IZU1 332 aaPredicted RBP10.89□□□□□ -0.67
TVP23B-210ENST00000582288 BCORL1Q5H9F3 1711 aa10.89□□□□□ -0.67
TVP23B-210ENST00000582288 HAX1O00165 279 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms