RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 SPDYE1Q8NFV5 336 aaPredicted RBP12.05□□□□□ -0.48
DDX42-213ENST00000581477 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
DDX42-213ENST00000581477 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
DDX42-213ENST00000581477 WRNQ14191 1432 aaPredicted RBP eCLIP12.04□□□□□ -0.48
DDX42-213ENST00000581477 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
DDX42-213ENST00000581477 KIF21AQ7Z4S6 1674 aa12.03□□□□□ -0.48
DDX42-213ENST00000581477 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
DDX42-213ENST00000581477 CLEC11AQ9Y240 323 aa12.02□□□□□ -0.49
DDX42-213ENST00000581477 CLCN6P51797 869 aa12.01□□□□□ -0.49
DDX42-213ENST00000581477 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
DDX42-213ENST00000581477 SPDYE6P0CI01 402 aa12□□□□□ -0.49
DDX42-213ENST00000581477 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
DDX42-213ENST00000581477 CUX1P39880 1505 aa11.99□□□□□ -0.49
DDX42-213ENST00000581477 TOP2BQ02880 1626 aa11.99□□□□□ -0.49
DDX42-213ENST00000581477 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
DDX42-213ENST00000581477 SYNJ1O43426 1573 aa11.98□□□□□ -0.49
DDX42-213ENST00000581477 POTEGQ6S5H5 508 aa11.98□□□□□ -0.49
DDX42-213ENST00000581477 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
DDX42-213ENST00000581477 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
DDX42-213ENST00000581477 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.5
DDX42-213ENST00000581477 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.5
DDX42-213ENST00000581477 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
DDX42-213ENST00000581477 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
DDX42-213ENST00000581477 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
DDX42-213ENST00000581477 WDR62O43379 1518 aa11.91□□□□□ -0.5
DDX42-213ENST00000581477 DCBLD2Q96PD2 775 aa11.91□□□□□ -0.5
DDX42-213ENST00000581477 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
DDX42-213ENST00000581477 OTUD5Q96G74 571 aa11.89□□□□□ -0.51
DDX42-213ENST00000581477 FGD5Q6ZNL6 1462 aa11.88□□□□□ -0.51
DDX42-213ENST00000581477 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
DDX42-213ENST00000581477 ZBTB22O15209 634 aa11.85□□□□□ -0.51
DDX42-213ENST00000581477 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
DDX42-213ENST00000581477 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
DDX42-213ENST00000581477 SOGA1O94964 1423 aa11.83□□□□□ -0.52
DDX42-213ENST00000581477 CUX2O14529 1486 aa11.83□□□□□ -0.52
DDX42-213ENST00000581477 ABCA10Q8WWZ4 1543 aa11.81□□□□□ -0.52
DDX42-213ENST00000581477 TARBP1Q13395 1621 aaKnown RBP11.8□□□□□ -0.52
DDX42-213ENST00000581477 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
DDX42-213ENST00000581477 EEA1Q15075 1411 aa11.79□□□□□ -0.52
DDX42-213ENST00000581477 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
DDX42-213ENST00000581477 IFT140Q96RY7 1462 aa11.78□□□□□ -0.52
DDX42-213ENST00000581477 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
DDX42-213ENST00000581477 KIF27Q86VH2 1401 aa11.76□□□□□ -0.53
DDX42-213ENST00000581477 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
DDX42-213ENST00000581477 FBLN2P98095 1184 aa11.73□□□□□ -0.53
DDX42-213ENST00000581477 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.53
DDX42-213ENST00000581477 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.53
DDX42-213ENST00000581477 CSRNP3Q8WYN3 585 aa11.71□□□□□ -0.53
DDX42-213ENST00000581477 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
DDX42-213ENST00000581477 GAPVD1Q14C86 1478 aa11.7□□□□□ -0.54
DDX42-213ENST00000581477 IGF1RP08069 1367 aa11.69□□□□□ -0.54
DDX42-213ENST00000581477 FAM9AQ8IZU1 332 aaPredicted RBP11.69□□□□□ -0.54
DDX42-213ENST00000581477 ZNF608Q9ULD9 1512 aaPredicted RBP11.69□□□□□ -0.54
DDX42-213ENST00000581477 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
DDX42-213ENST00000581477 ERICH3Q5RHP9 1530 aa11.67□□□□□ -0.54
DDX42-213ENST00000581477 AQRO60306 1485 aaKnown RBP eCLIP11.67□□□□□ -0.542e-12■■■□□ 16
DDX42-213ENST00000581477 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
DDX42-213ENST00000581477 EIF4G3O43432 1585 aaKnown RBP11.65□□□□□ -0.54
DDX42-213ENST00000581477 GRIN2BQ13224 1484 aa11.64□□□□□ -0.55
DDX42-213ENST00000581477 PRXQ9BXM0 1461 aa11.64□□□□□ -0.55
DDX42-213ENST00000581477 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
DDX42-213ENST00000581477 FARP1Q9Y4F1 1045 aaPredicted RBP11.64□□□□□ -0.55
DDX42-213ENST00000581477 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
DDX42-213ENST00000581477 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
DDX42-213ENST00000581477 KIF21BO75037 1637 aa11.63□□□□□ -0.55
DDX42-213ENST00000581477 CUL7Q14999 1698 aa11.62□□□□□ -0.55
DDX42-213ENST00000581477 CARMIL1Q5VZK9 1371 aa11.61□□□□□ -0.55
DDX42-213ENST00000581477 MAGI1Q96QZ7 1491 aaPredicted RBP11.58□□□□□ -0.56
DDX42-213ENST00000581477 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.56
DDX42-213ENST00000581477 LOC105371045A0A1W2PR82 267 aa11.58□□□□□ -0.56
DDX42-213ENST00000581477 FHAD1B1AJZ9 1412 aa11.58□□□□□ -0.56
DDX42-213ENST00000581477 GOLGA3Q08378 1498 aa11.57□□□□□ -0.56
DDX42-213ENST00000581477 ADAMTS12P58397 1594 aa11.56□□□□□ -0.56
DDX42-213ENST00000581477 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
DDX42-213ENST00000581477 SYNJ2O15056 1496 aa11.53□□□□□ -0.56
DDX42-213ENST00000581477 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
DDX42-213ENST00000581477 GRIN2AQ12879 1464 aa11.5□□□□□ -0.57
DDX42-213ENST00000581477 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
DDX42-213ENST00000581477 UBTFP17480 764 aaKnown RBP11.49□□□□□ -0.57
DDX42-213ENST00000581477 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
DDX42-213ENST00000581477 LCE2DQ5TA82 110 aaPredicted RBP11.48□□□□□ -0.57
DDX42-213ENST00000581477 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
DDX42-213ENST00000581477 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
DDX42-213ENST00000581477 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
DDX42-213ENST00000581477 NUP160Q12769 1436 aa11.44□□□□□ -0.58
DDX42-213ENST00000581477 CHD1O14646 1710 aa11.44□□□□□ -0.58
DDX42-213ENST00000581477 CTTNBP2Q8WZ74 1663 aa11.44□□□□□ -0.58
DDX42-213ENST00000581477 FAM163AQ96GL9 167 aaPredicted RBP11.44□□□□□ -0.58
DDX42-213ENST00000581477 KIAA0586Q9BVV6 1533 aa11.43□□□□□ -0.58
DDX42-213ENST00000581477 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
DDX42-213ENST00000581477 CEP162Q5TB80 1403 aa11.4□□□□□ -0.58
DDX42-213ENST00000581477 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
DDX42-213ENST00000581477 IQGAP2Q13576 1575 aa11.39□□□□□ -0.59
DDX42-213ENST00000581477 CLIP1P30622 1438 aa11.37□□□□□ -0.59
DDX42-213ENST00000581477 UGGT2Q9NYU1 1516 aa11.36□□□□□ -0.59
DDX42-213ENST00000581477 METRNQ9UJH8 293 aa11.35□□□□□ -0.59
DDX42-213ENST00000581477 CLASP1Q7Z460 1538 aa11.35□□□□□ -0.59
DDX42-213ENST00000581477 ARHGAP35Q9NRY4 1499 aa11.34□□□□□ -0.59
DDX42-213ENST00000581477 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
DDX42-213ENST00000581477 EFCAB5A4FU69 1503 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms