RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
DDX42-213ENST00000581477 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
DDX42-213ENST00000581477 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
DDX42-213ENST00000581477 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
DDX42-213ENST00000581477 POTEDQ86YR6 584 aa19.44■□□□□ 0.7
DDX42-213ENST00000581477 FOXD1Q16676 465 aa18.85■□□□□ 0.61
DDX42-213ENST00000581477 MSH5O43196 834 aa18.17■□□□□ 0.5
DDX42-213ENST00000581477 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
DDX42-213ENST00000581477 PPP6R1Q9UPN7 881 aa16.75■□□□□ 0.27
DDX42-213ENST00000581477 ADRA2BP18089 450 aa16.66■□□□□ 0.26
DDX42-213ENST00000581477 NISCHQ9Y2I1 1504 aa16.62■□□□□ 0.25
DDX42-213ENST00000581477 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
DDX42-213ENST00000581477 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
DDX42-213ENST00000581477 DMRT2Q9Y5R5 561 aa15.82■□□□□ 0.12
DDX42-213ENST00000581477 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
DDX42-213ENST00000581477 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
DDX42-213ENST00000581477 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
DDX42-213ENST00000581477 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
DDX42-213ENST00000581477 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
DDX42-213ENST00000581477 POTEHQ6S545 545 aa15.04■□□□□ -0
DDX42-213ENST00000581477 HOXD11P31277 338 aaPredicted RBP14.81□□□□□ -0.04
DDX42-213ENST00000581477 CCDC180Q9P1Z9 1646 aa14.62□□□□□ -0.07
DDX42-213ENST00000581477 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
DDX42-213ENST00000581477 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
DDX42-213ENST00000581477 CNKSR2Q8WXI2 1034 aa14.29□□□□□ -0.12
DDX42-213ENST00000581477 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
DDX42-213ENST00000581477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
DDX42-213ENST00000581477 DSG3P32926 999 aa13.99□□□□□ -0.17
DDX42-213ENST00000581477 ABCC9O60706 1549 aa13.92□□□□□ -0.18
DDX42-213ENST00000581477 ZCCHC6Q5VYS8 1495 aaKnown RBP13.91□□□□□ -0.18
DDX42-213ENST00000581477 CAPN15O75808 1086 aa13.84□□□□□ -0.19
DDX42-213ENST00000581477 DCAF1Q9Y4B6 1507 aa13.8□□□□□ -0.2
DDX42-213ENST00000581477 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
DDX42-213ENST00000581477 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
DDX42-213ENST00000581477 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
DDX42-213ENST00000581477 NACADO15069 1562 aa13.66□□□□□ -0.22
DDX42-213ENST00000581477 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
DDX42-213ENST00000581477 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
DDX42-213ENST00000581477 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.24
DDX42-213ENST00000581477 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
DDX42-213ENST00000581477 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
DDX42-213ENST00000581477 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
DDX42-213ENST00000581477 ABCB7O75027 752 aa13.38□□□□□ -0.27
DDX42-213ENST00000581477 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
DDX42-213ENST00000581477 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
DDX42-213ENST00000581477 APLP2Q06481 763 aa13.33□□□□□ -0.28
DDX42-213ENST00000581477 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
DDX42-213ENST00000581477 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.28
DDX42-213ENST00000581477 SHROOM4Q9ULL8 1493 aa13.27□□□□□ -0.29
DDX42-213ENST00000581477 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
DDX42-213ENST00000581477 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
DDX42-213ENST00000581477 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
DDX42-213ENST00000581477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
DDX42-213ENST00000581477 HAX1O00165 279 aa13.03□□□□□ -0.32
DDX42-213ENST00000581477 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
DDX42-213ENST00000581477 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
DDX42-213ENST00000581477 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
DDX42-213ENST00000581477 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.34
DDX42-213ENST00000581477 KCNA4P22459 653 aa12.89□□□□□ -0.35
DDX42-213ENST00000581477 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
DDX42-213ENST00000581477 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
DDX42-213ENST00000581477 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
DDX42-213ENST00000581477 PLSCR2Q9NRY7 297 aa12.82□□□□□ -0.36
DDX42-213ENST00000581477 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
DDX42-213ENST00000581477 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
DDX42-213ENST00000581477 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
DDX42-213ENST00000581477 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
DDX42-213ENST00000581477 LHX8Q68G74 356 aa12.75□□□□□ -0.37
DDX42-213ENST00000581477 POLA2Q14181 598 aa12.74□□□□□ -0.37
DDX42-213ENST00000581477 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
DDX42-213ENST00000581477 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX42-213ENST00000581477 PEG3Q9GZU2 1588 aa12.71□□□□□ -0.37
DDX42-213ENST00000581477 SUPT5HO00267 1087 aaKnown RBP12.69□□□□□ -0.38
DDX42-213ENST00000581477 EVX2Q03828 476 aa12.69□□□□□ -0.38
DDX42-213ENST00000581477 WIZO95785 1651 aa12.67□□□□□ -0.38
DDX42-213ENST00000581477 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
DDX42-213ENST00000581477 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
DDX42-213ENST00000581477 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
DDX42-213ENST00000581477 NCAPD3P42695 1498 aa12.62□□□□□ -0.39
DDX42-213ENST00000581477 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
DDX42-213ENST00000581477 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
DDX42-213ENST00000581477 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
DDX42-213ENST00000581477 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
DDX42-213ENST00000581477 ZBTB12Q9Y330 459 aaPredicted RBP12.53□□□□□ -0.4
DDX42-213ENST00000581477 CCDC88BA6NC98 1476 aa12.42□□□□□ -0.42
DDX42-213ENST00000581477 GABBR2O75899 941 aa12.41□□□□□ -0.42
DDX42-213ENST00000581477 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
DDX42-213ENST00000581477 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
DDX42-213ENST00000581477 MYCNP04198 464 aaPredicted RBP12.29□□□□□ -0.44
DDX42-213ENST00000581477 PRKAR2AP13861 404 aaKnown RBP12.28□□□□□ -0.44
DDX42-213ENST00000581477 CFTRP13569 1480 aa12.27□□□□□ -0.45
DDX42-213ENST00000581477 CADPSQ9ULU8 1353 aa12.26□□□□□ -0.45
DDX42-213ENST00000581477 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
DDX42-213ENST00000581477 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
DDX42-213ENST00000581477 PRDM2Q13029 1718 aa12.18□□□□□ -0.46
DDX42-213ENST00000581477 NESP48681 1621 aa12.17□□□□□ -0.46
DDX42-213ENST00000581477 PDS5BQ9NTI5 1447 aa12.11□□□□□ -0.47
DDX42-213ENST00000581477 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
DDX42-213ENST00000581477 FANCD2Q9BXW9 1451 aa12.09□□□□□ -0.47
DDX42-213ENST00000581477 POTEMA6NI47 508 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms