RNA–Protein interactions for RNA: ENST00000580261.5

RPL17-208, Transcript of ribosomal protein L17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL17, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-208ENST00000580261 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
RPL17-208ENST00000580261 GOLGA3Q08378 1498 aa11.93□□□□□ -0.5
RPL17-208ENST00000580261 CEP164Q9UPV0 1460 aa11.92□□□□□ -0.5
RPL17-208ENST00000580261 KIF21BO75037 1637 aa11.92□□□□□ -0.5
RPL17-208ENST00000580261 DNMBPQ6XZF7 1577 aa11.89□□□□□ -0.51
RPL17-208ENST00000580261 KIF27Q86VH2 1401 aa11.89□□□□□ -0.51
RPL17-208ENST00000580261 PDS5BQ9NTI5 1447 aa11.89□□□□□ -0.51
RPL17-208ENST00000580261 FGD5Q6ZNL6 1462 aa11.88□□□□□ -0.51
RPL17-208ENST00000580261 TOPBP1Q92547 1522 aa11.86□□□□□ -0.51
RPL17-208ENST00000580261 UBTFP17480 764 aaKnown RBP11.86□□□□□ -0.51
RPL17-208ENST00000580261 CEP162Q5TB80 1403 aa11.85□□□□□ -0.51
RPL17-208ENST00000580261 PRXQ9BXM0 1461 aa11.84□□□□□ -0.51
RPL17-208ENST00000580261 RAPGEF2Q9Y4G8 1499 aa11.83□□□□□ -0.52
RPL17-208ENST00000580261 URB2Q14146 1524 aaKnown RBP11.83□□□□□ -0.52
RPL17-208ENST00000580261 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
RPL17-208ENST00000580261 CUX2O14529 1486 aa11.83□□□□□ -0.52
RPL17-208ENST00000580261 ERICH3Q5RHP9 1530 aa11.82□□□□□ -0.52
RPL17-208ENST00000580261 POLA1P09884 1462 aaPredicted RBP11.81□□□□□ -0.52
RPL17-208ENST00000580261 KIF21AQ7Z4S6 1674 aa11.8□□□□□ -0.52
RPL17-208ENST00000580261 ABCA10Q8WWZ4 1543 aa11.79□□□□□ -0.52
RPL17-208ENST00000580261 IGF1RP08069 1367 aa11.79□□□□□ -0.52
RPL17-208ENST00000580261 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.52
RPL17-208ENST00000580261 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
RPL17-208ENST00000580261 PCGF6Q9BYE7 350 aa11.76□□□□□ -0.53
RPL17-208ENST00000580261 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
RPL17-208ENST00000580261 CLIP1P30622 1438 aa11.74□□□□□ -0.53
RPL17-208ENST00000580261 MRC2Q9UBG0 1479 aa11.73□□□□□ -0.53
RPL17-208ENST00000580261 ZBTB12Q9Y330 459 aaPredicted RBP11.73□□□□□ -0.53
RPL17-208ENST00000580261 WDR97A6NE52 1622 aa11.72□□□□□ -0.53
RPL17-208ENST00000580261 CARMIL1Q5VZK9 1371 aa11.72□□□□□ -0.53
RPL17-208ENST00000580261 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
RPL17-208ENST00000580261 ABCA5Q8WWZ7 1642 aa11.67□□□□□ -0.54
RPL17-208ENST00000580261 WDR62O43379 1518 aa11.66□□□□□ -0.54
RPL17-208ENST00000580261 CUL7Q14999 1698 aa11.65□□□□□ -0.54
RPL17-208ENST00000580261 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
RPL17-208ENST00000580261 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
RPL17-208ENST00000580261 VPS8Q8N3P4 1428 aa11.65□□□□□ -0.54
RPL17-208ENST00000580261 TDRD9Q8NDG6 1382 aaKnown RBP11.65□□□□□ -0.55
RPL17-208ENST00000580261 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
RPL17-208ENST00000580261 ARAP1Q96P48 1450 aa11.62□□□□□ -0.55
RPL17-208ENST00000580261 IFT140Q96RY7 1462 aa11.62□□□□□ -0.55
RPL17-208ENST00000580261 CHRDL2Q6WN34 429 aa11.61□□□□□ -0.55
RPL17-208ENST00000580261 PPARGC1BQ86YN6 1023 aaKnown RBP11.61□□□□□ -0.55
RPL17-208ENST00000580261 RANGAP1P46060 587 aaPredicted RBP11.6□□□□□ -0.55
RPL17-208ENST00000580261 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
RPL17-208ENST00000580261 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
RPL17-208ENST00000580261 ARHGAP35Q9NRY4 1499 aa11.59□□□□□ -0.55
RPL17-208ENST00000580261 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.564e-7■■■■■ 31.3
RPL17-208ENST00000580261 GRIN2BQ13224 1484 aa11.55□□□□□ -0.56
RPL17-208ENST00000580261 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
RPL17-208ENST00000580261 FHAD1B1AJZ9 1412 aa11.54□□□□□ -0.56
RPL17-208ENST00000580261 HRCP23327 699 aa11.54□□□□□ -0.56
RPL17-208ENST00000580261 REM2Q8IYK8 340 aaPredicted RBP11.53□□□□□ -0.56
RPL17-208ENST00000580261 ZNF608Q9ULD9 1512 aaPredicted RBP11.53□□□□□ -0.56
RPL17-208ENST00000580261 CTTNBP2Q8WZ74 1663 aa11.52□□□□□ -0.56
RPL17-208ENST00000580261 ADAMTS12P58397 1594 aa11.51□□□□□ -0.57
RPL17-208ENST00000580261 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
RPL17-208ENST00000580261 FBLN2P98095 1184 aa11.5□□□□□ -0.57
RPL17-208ENST00000580261 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
RPL17-208ENST00000580261 TTBK1Q5TCY1 1321 aaPredicted RBP11.48□□□□□ -0.57
RPL17-208ENST00000580261 EIF4G3O43432 1585 aaKnown RBP11.47□□□□□ -0.57
RPL17-208ENST00000580261 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
RPL17-208ENST00000580261 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
RPL17-208ENST00000580261 SAMD9Q5K651 1589 aa11.44□□□□□ -0.58
RPL17-208ENST00000580261 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
RPL17-208ENST00000580261 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
RPL17-208ENST00000580261 P3H3Q8IVL6 736 aa11.43□□□□□ -0.58
RPL17-208ENST00000580261 KANK4Q5T7N3 995 aaPredicted RBP11.42□□□□□ -0.58
RPL17-208ENST00000580261 FMN1Q68DA7 1419 aa11.41□□□□□ -0.58
RPL17-208ENST00000580261 CASKIN1Q8WXD9 1431 aa11.41□□□□□ -0.58
RPL17-208ENST00000580261 IQGAP2Q13576 1575 aa11.41□□□□□ -0.58
RPL17-208ENST00000580261 GRIN2AQ12879 1464 aa11.4□□□□□ -0.58
RPL17-208ENST00000580261 FYCO1Q9BQS8 1478 aa11.4□□□□□ -0.58
RPL17-208ENST00000580261 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
RPL17-208ENST00000580261 PITPNM1O00562 1244 aa11.4□□□□□ -0.58
RPL17-208ENST00000580261 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
RPL17-208ENST00000580261 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
RPL17-208ENST00000580261 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
RPL17-208ENST00000580261 TIAM1Q13009 1591 aa11.4□□□□□ -0.58
RPL17-208ENST00000580261 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
RPL17-208ENST00000580261 KIAA0586Q9BVV6 1533 aa11.38□□□□□ -0.59
RPL17-208ENST00000580261 UGGT2Q9NYU1 1516 aa11.37□□□□□ -0.59
RPL17-208ENST00000580261 CFAP43Q8NDM7 1665 aa11.36□□□□□ -0.59
RPL17-208ENST00000580261 ZEB1P37275 1124 aaPredicted RBP11.36□□□□□ -0.59
RPL17-208ENST00000580261 FKBP8Q14318 412 aa11.36□□□□□ -0.59
RPL17-208ENST00000580261 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
RPL17-208ENST00000580261 CHMP7Q8WUX9 453 aaPredicted RBP11.36□□□□□ -0.59
RPL17-208ENST00000580261 LRRC9Q6ZRR7 1453 aa11.35□□□□□ -0.59
RPL17-208ENST00000580261 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
RPL17-208ENST00000580261 NUP160Q12769 1436 aa11.33□□□□□ -0.6
RPL17-208ENST00000580261 RRBP1Q9P2E9 1410 aaKnown RBP11.33□□□□□ -0.6
RPL17-208ENST00000580261 ATP1B4Q9UN42 357 aaPredicted RBP11.32□□□□□ -0.6
RPL17-208ENST00000580261 CEP170Q5SW79 1584 aa11.32□□□□□ -0.6
RPL17-208ENST00000580261 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
RPL17-208ENST00000580261 KIAA0556O60303 1618 aa11.29□□□□□ -0.6
RPL17-208ENST00000580261 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
RPL17-208ENST00000580261 CCNB3Q8WWL7 1395 aa11.28□□□□□ -0.6
RPL17-208ENST00000580261 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPL17-208ENST00000580261 CCDC18Q5T9S5 1454 aa11.26□□□□□ -0.61
RPL17-208ENST00000580261 CCER1Q8TC90 406 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms