RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
RBFOX3-201ENST00000578887 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
RBFOX3-201ENST00000578887 BCANQ96GW7 911 aa20.17■□□□□ 0.82
RBFOX3-201ENST00000578887 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
RBFOX3-201ENST00000578887 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
RBFOX3-201ENST00000578887 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
RBFOX3-201ENST00000578887 CUX2O14529 1486 aa20.09■□□□□ 0.81
RBFOX3-201ENST00000578887 POLA1P09884 1462 aaPredicted RBP20.08■□□□□ 0.81
RBFOX3-201ENST00000578887 RAD54L2Q9Y4B4 1467 aa20.07■□□□□ 0.8
RBFOX3-201ENST00000578887 RRBP1Q9P2E9 1410 aaKnown RBP20.05■□□□□ 0.8
RBFOX3-201ENST00000578887 PRXQ9BXM0 1461 aa20.04■□□□□ 0.8
RBFOX3-201ENST00000578887 ANP32EQ9BTT0 268 aa20.02■□□□□ 0.8
RBFOX3-201ENST00000578887 ERICH6Q7L0X2 663 aa20.01■□□□□ 0.79
RBFOX3-201ENST00000578887 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
RBFOX3-201ENST00000578887 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
RBFOX3-201ENST00000578887 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
RBFOX3-201ENST00000578887 FKBP8Q14318 412 aa19.99■□□□□ 0.79
RBFOX3-201ENST00000578887 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
RBFOX3-201ENST00000578887 RAB3GAP2Q9H2M9 1393 aa19.97■□□□□ 0.79
RBFOX3-201ENST00000578887 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
RBFOX3-201ENST00000578887 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
RBFOX3-201ENST00000578887 IGF1RP08069 1367 aa19.96■□□□□ 0.79
RBFOX3-201ENST00000578887 MAPKBP1O60336 1514 aa19.96■□□□□ 0.79
RBFOX3-201ENST00000578887 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
RBFOX3-201ENST00000578887 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
RBFOX3-201ENST00000578887 WDR97A6NE52 1622 aa19.92■□□□□ 0.78
RBFOX3-201ENST00000578887 TRIM52Q96A61 297 aa19.88■□□□□ 0.77
RBFOX3-201ENST00000578887 ERCC6Q03468 1493 aa19.87■□□□□ 0.77
RBFOX3-201ENST00000578887 TDRD9Q8NDG6 1382 aaKnown RBP19.86■□□□□ 0.77
RBFOX3-201ENST00000578887 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
RBFOX3-201ENST00000578887 TARBP1Q13395 1621 aaKnown RBP19.85■□□□□ 0.77
RBFOX3-201ENST00000578887 ABCA5Q8WWZ7 1642 aa19.82■□□□□ 0.76
RBFOX3-201ENST00000578887 WDR62O43379 1518 aa19.82■□□□□ 0.76
RBFOX3-201ENST00000578887 PPP1R15AO75807 674 aaPredicted RBP19.81■□□□□ 0.76
RBFOX3-201ENST00000578887 FAM50AQ14320 339 aaKnown RBP19.79■□□□□ 0.76
RBFOX3-201ENST00000578887 RBM19Q9Y4C8 960 aaKnown RBP19.79■□□□□ 0.76
RBFOX3-201ENST00000578887 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
RBFOX3-201ENST00000578887 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
RBFOX3-201ENST00000578887 BCL11AQ9H165 835 aa19.78■□□□□ 0.76
RBFOX3-201ENST00000578887 SETD5Q9C0A6 1442 aa19.78■□□□□ 0.76
RBFOX3-201ENST00000578887 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.75
RBFOX3-201ENST00000578887 CUL7Q14999 1698 aa19.75■□□□□ 0.75
RBFOX3-201ENST00000578887 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
RBFOX3-201ENST00000578887 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
RBFOX3-201ENST00000578887 KCNA4P22459 653 aa19.71■□□□□ 0.75
RBFOX3-201ENST00000578887 TIMELESSQ9UNS1 1208 aa19.71■□□□□ 0.75
RBFOX3-201ENST00000578887 ATP1B4Q9UN42 357 aaPredicted RBP19.7■□□□□ 0.74
RBFOX3-201ENST00000578887 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
RBFOX3-201ENST00000578887 ZNF608Q9ULD9 1512 aaPredicted RBP19.69■□□□□ 0.74
RBFOX3-201ENST00000578887 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
RBFOX3-201ENST00000578887 IFT140Q96RY7 1462 aa19.68■□□□□ 0.74
RBFOX3-201ENST00000578887 AMER1Q5JTC6 1135 aaPredicted RBP19.68■□□□□ 0.74
RBFOX3-201ENST00000578887 MSH5O43196 834 aa19.67■□□□□ 0.74
RBFOX3-201ENST00000578887 NEFLP07196 543 aa19.67■□□□□ 0.74
RBFOX3-201ENST00000578887 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
RBFOX3-201ENST00000578887 IRX6P78412 446 aaPredicted RBP19.65■□□□□ 0.74
RBFOX3-201ENST00000578887 ANP32CO43423 234 aa19.64■□□□□ 0.73
RBFOX3-201ENST00000578887 CTTNBP2Q8WZ74 1663 aa19.6■□□□□ 0.73
RBFOX3-201ENST00000578887 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
RBFOX3-201ENST00000578887 GRIN2BQ13224 1484 aa19.58■□□□□ 0.73
RBFOX3-201ENST00000578887 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
RBFOX3-201ENST00000578887 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
RBFOX3-201ENST00000578887 FHAD1B1AJZ9 1412 aa19.54■□□□□ 0.72
RBFOX3-201ENST00000578887 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
RBFOX3-201ENST00000578887 PCF11O94913 1555 aaKnown RBP19.52■□□□□ 0.72
RBFOX3-201ENST00000578887 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
RBFOX3-201ENST00000578887 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
RBFOX3-201ENST00000578887 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
RBFOX3-201ENST00000578887 ARXQ96QS3 562 aa19.49■□□□□ 0.71
RBFOX3-201ENST00000578887 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
RBFOX3-201ENST00000578887 PTPRKQ15262 1439 aa19.46■□□□□ 0.71
RBFOX3-201ENST00000578887 CCDC184Q52MB2 194 aa19.45■□□□□ 0.7
RBFOX3-201ENST00000578887 CFAP43Q8NDM7 1665 aa19.43■□□□□ 0.7
RBFOX3-201ENST00000578887 EFCAB5A4FU69 1503 aa19.42■□□□□ 0.7
RBFOX3-201ENST00000578887 CCDC18Q5T9S5 1454 aa19.39■□□□□ 0.7
RBFOX3-201ENST00000578887 MAGI1Q96QZ7 1491 aaPredicted RBP19.38■□□□□ 0.69
RBFOX3-201ENST00000578887 SAMD9Q5K651 1589 aa19.38■□□□□ 0.69
RBFOX3-201ENST00000578887 WASHC2AQ641Q2 1341 aa19.37■□□□□ 0.69
RBFOX3-201ENST00000578887 GRIN2AQ12879 1464 aa19.37■□□□□ 0.69
RBFOX3-201ENST00000578887 IQGAP2Q13576 1575 aa19.36■□□□□ 0.69
RBFOX3-201ENST00000578887 FGD6Q6ZV73 1430 aa19.36■□□□□ 0.69
RBFOX3-201ENST00000578887 TULP1O00294 542 aaPredicted RBP19.36■□□□□ 0.69
RBFOX3-201ENST00000578887 KDM5BQ9UGL1 1544 aa19.35■□□□□ 0.69
RBFOX3-201ENST00000578887 CDK11AQ9UQ88 783 aaPredicted RBP19.34■□□□□ 0.69
RBFOX3-201ENST00000578887 FBLN2P98095 1184 aa19.34■□□□□ 0.69
RBFOX3-201ENST00000578887 HSPA5P11021 654 aaKnown RBP19.33■□□□□ 0.69
RBFOX3-201ENST00000578887 SYNJ2O15056 1496 aa19.33■□□□□ 0.69
RBFOX3-201ENST00000578887 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
RBFOX3-201ENST00000578887 FANCIQ9NVI1 1328 aa19.33■□□□□ 0.68
RBFOX3-201ENST00000578887 UACAQ9BZF9 1416 aa19.31■□□□□ 0.68
RBFOX3-201ENST00000578887 CASKIN1Q8WXD9 1431 aa19.3■□□□□ 0.68
RBFOX3-201ENST00000578887 FYCO1Q9BQS8 1478 aa19.29■□□□□ 0.68
RBFOX3-201ENST00000578887 C11orf95C9JLR9 678 aaPredicted RBP19.29■□□□□ 0.68
RBFOX3-201ENST00000578887 B4GALNT3Q6L9W6 998 aa19.29■□□□□ 0.68
RBFOX3-201ENST00000578887 HFM1A2PYH4 1435 aa19.29■□□□□ 0.68
RBFOX3-201ENST00000578887 NAIPQ13075 1403 aa19.29■□□□□ 0.68
RBFOX3-201ENST00000578887 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
RBFOX3-201ENST00000578887 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
RBFOX3-201ENST00000578887 PTPN23Q9H3S7 1636 aa19.28■□□□□ 0.68
RBFOX3-201ENST00000578887 CEP170Q5SW79 1584 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms