RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 SLC4A1APQ9BWU0 796 aaKnown RBP18.64■□□□□ 0.57
TRAPPC8-204ENST00000578252 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRAPPC8-204ENST00000578252 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
TRAPPC8-204ENST00000578252 ERICH3Q5RHP9 1530 aa18.6■□□□□ 0.57
TRAPPC8-204ENST00000578252 RUSC2Q8N2Y8 1516 aa18.55■□□□□ 0.56
TRAPPC8-204ENST00000578252 CUL7Q14999 1698 aa18.55■□□□□ 0.56
TRAPPC8-204ENST00000578252 MAGI1Q96QZ7 1491 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC8-204ENST00000578252 IGF1RP08069 1367 aa18.51■□□□□ 0.55
TRAPPC8-204ENST00000578252 SNAPC4Q5SXM2 1469 aa18.5■□□□□ 0.55
TRAPPC8-204ENST00000578252 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
TRAPPC8-204ENST00000578252 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
TRAPPC8-204ENST00000578252 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
TRAPPC8-204ENST00000578252 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC8-204ENST00000578252 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
TRAPPC8-204ENST00000578252 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
TRAPPC8-204ENST00000578252 PRXQ9BXM0 1461 aa18.42■□□□□ 0.54
TRAPPC8-204ENST00000578252 KIF21BO75037 1637 aa18.41■□□□□ 0.54
TRAPPC8-204ENST00000578252 CHD1O14646 1710 aa18.39■□□□□ 0.53
TRAPPC8-204ENST00000578252 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.53
TRAPPC8-204ENST00000578252 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC8-204ENST00000578252 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
TRAPPC8-204ENST00000578252 CHMP7Q8WUX9 453 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC8-204ENST00000578252 CAPN15O75808 1086 aa18.33■□□□□ 0.52
TRAPPC8-204ENST00000578252 GOLGA3Q08378 1498 aa18.32■□□□□ 0.52
TRAPPC8-204ENST00000578252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC8-204ENST00000578252 FBLN2P98095 1184 aa18.3■□□□□ 0.52
TRAPPC8-204ENST00000578252 HNRNPUL2Q1KMD3 747 aaKnown RBP18.3■□□□□ 0.52
TRAPPC8-204ENST00000578252 NUP160Q12769 1436 aa18.26■□□□□ 0.51
TRAPPC8-204ENST00000578252 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
TRAPPC8-204ENST00000578252 FOXD4L1Q9NU39 408 aa18.25■□□□□ 0.51
TRAPPC8-204ENST00000578252 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC8-204ENST00000578252 APLP2Q06481 763 aa18.24■□□□□ 0.51
TRAPPC8-204ENST00000578252 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
TRAPPC8-204ENST00000578252 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC8-204ENST00000578252 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
TRAPPC8-204ENST00000578252 OSCARQ8IYS5 282 aa18.19■□□□□ 0.5
TRAPPC8-204ENST00000578252 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
TRAPPC8-204ENST00000578252 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
TRAPPC8-204ENST00000578252 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
TRAPPC8-204ENST00000578252 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
TRAPPC8-204ENST00000578252 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC8-204ENST00000578252 DSG3P32926 999 aa18.12■□□□□ 0.49
TRAPPC8-204ENST00000578252 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
TRAPPC8-204ENST00000578252 SHROOM2Q13796 1616 aa18.11■□□□□ 0.49
TRAPPC8-204ENST00000578252 ZBTB22O15209 634 aa18.09■□□□□ 0.49
TRAPPC8-204ENST00000578252 UGGT2Q9NYU1 1516 aa18.08■□□□□ 0.49
TRAPPC8-204ENST00000578252 LOC105371045A0A1W2PR82 267 aa18.08■□□□□ 0.48
TRAPPC8-204ENST00000578252 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC8-204ENST00000578252 EFCAB5A4FU69 1503 aa18.03■□□□□ 0.48
TRAPPC8-204ENST00000578252 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
TRAPPC8-204ENST00000578252 SAMD9Q5K651 1589 aa18.01■□□□□ 0.47
TRAPPC8-204ENST00000578252 CARMIL2Q6F5E8 1435 aa18■□□□□ 0.47
TRAPPC8-204ENST00000578252 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC8-204ENST00000578252 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
TRAPPC8-204ENST00000578252 CEP162Q5TB80 1403 aa17.98■□□□□ 0.47
TRAPPC8-204ENST00000578252 DISP1Q96F81 1524 aa17.97■□□□□ 0.47
TRAPPC8-204ENST00000578252 CLIP1P30622 1438 aa17.97■□□□□ 0.47
TRAPPC8-204ENST00000578252 ABCB7O75027 752 aa17.94■□□□□ 0.46
TRAPPC8-204ENST00000578252 ARHGAP35Q9NRY4 1499 aa17.93■□□□□ 0.46
TRAPPC8-204ENST00000578252 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
TRAPPC8-204ENST00000578252 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC8-204ENST00000578252 ERCC6L2Q5T890 1561 aa17.91■□□□□ 0.46
TRAPPC8-204ENST00000578252 RIMBP3CA6NJZ7 1639 aa17.88■□□□□ 0.45
TRAPPC8-204ENST00000578252 RIMBP3BA6NNM3 1639 aa17.88■□□□□ 0.45
TRAPPC8-204ENST00000578252 RIMBP3Q9UFD9 1639 aa17.88■□□□□ 0.45
TRAPPC8-204ENST00000578252 FHOD3Q2V2M9 1422 aa17.86■□□□□ 0.45
TRAPPC8-204ENST00000578252 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
TRAPPC8-204ENST00000578252 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
TRAPPC8-204ENST00000578252 PTPRGP23470 1445 aa17.83■□□□□ 0.45
TRAPPC8-204ENST00000578252 P3H3Q8IVL6 736 aa17.83■□□□□ 0.44
TRAPPC8-204ENST00000578252 DNAJC5Q9H3Z4 198 aa17.81■□□□□ 0.44
TRAPPC8-204ENST00000578252 ATF5Q9Y2D1 282 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC8-204ENST00000578252 ABCA8O94911 1581 aa17.76■□□□□ 0.43
TRAPPC8-204ENST00000578252 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
TRAPPC8-204ENST00000578252 RAPGEF6Q8TEU7 1601 aa17.76■□□□□ 0.43
TRAPPC8-204ENST00000578252 UACAQ9BZF9 1416 aa17.73■□□□□ 0.43
TRAPPC8-204ENST00000578252 HECW1Q76N89 1606 aa17.73■□□□□ 0.43
TRAPPC8-204ENST00000578252 UHRF1BP1LA0JNW5 1464 aa17.73■□□□□ 0.43
TRAPPC8-204ENST00000578252 FYCO1Q9BQS8 1478 aa17.73■□□□□ 0.43
TRAPPC8-204ENST00000578252 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC8-204ENST00000578252 CASKIN1Q8WXD9 1431 aa17.72■□□□□ 0.43
TRAPPC8-204ENST00000578252 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
TRAPPC8-204ENST00000578252 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
TRAPPC8-204ENST00000578252 PLB1Q6P1J6 1458 aa17.71■□□□□ 0.43
TRAPPC8-204ENST00000578252 POLA2Q14181 598 aa17.69■□□□□ 0.42
TRAPPC8-204ENST00000578252 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
TRAPPC8-204ENST00000578252 CYB5RLQ6IPT4 315 aa17.66■□□□□ 0.42
TRAPPC8-204ENST00000578252 NUP153P49790 1475 aaKnown RBP17.65■□□□□ 0.42
TRAPPC8-204ENST00000578252 CCDC18Q5T9S5 1454 aa17.65■□□□□ 0.42
TRAPPC8-204ENST00000578252 KDM5BQ9UGL1 1544 aa17.62■□□□□ 0.41
TRAPPC8-204ENST00000578252 ATXN8OSP0DMR3 200 aa17.62■□□□□ 0.41
TRAPPC8-204ENST00000578252 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
TRAPPC8-204ENST00000578252 EPRSP07814 1512 aaKnown RBP17.61■□□□□ 0.41
TRAPPC8-204ENST00000578252 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
TRAPPC8-204ENST00000578252 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC8-204ENST00000578252 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
TRAPPC8-204ENST00000578252 MAP3K1Q13233 1512 aa17.59■□□□□ 0.41
TRAPPC8-204ENST00000578252 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRAPPC8-204ENST00000578252 ATP10BO94823 1461 aa17.57■□□□□ 0.4
TRAPPC8-204ENST00000578252 TIAM1Q13009 1591 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms