RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
PPP4R1-207ENST00000578010 FBLN2P98095 1184 aa11.24□□□□□ -0.61
PPP4R1-207ENST00000578010 GRIN2BQ13224 1484 aa11.24□□□□□ -0.61
PPP4R1-207ENST00000578010 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
PPP4R1-207ENST00000578010 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
PPP4R1-207ENST00000578010 CACNB1Q02641 598 aaPredicted RBP11.2□□□□□ -0.62
PPP4R1-207ENST00000578010 CHMP7Q8WUX9 453 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-207ENST00000578010 ADAMTS12P58397 1594 aa11.17□□□□□ -0.62
PPP4R1-207ENST00000578010 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-207ENST00000578010 FAM9AQ8IZU1 332 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-207ENST00000578010 SYNJ2O15056 1496 aa11.16□□□□□ -0.62
PPP4R1-207ENST00000578010 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
PPP4R1-207ENST00000578010 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
PPP4R1-207ENST00000578010 CUL7Q14999 1698 aa11.11□□□□□ -0.63
PPP4R1-207ENST00000578010 RIMBP3CA6NJZ7 1639 aa11.1□□□□□ -0.63
PPP4R1-207ENST00000578010 RIMBP3BA6NNM3 1639 aa11.1□□□□□ -0.63
PPP4R1-207ENST00000578010 RIMBP3Q9UFD9 1639 aa11.1□□□□□ -0.63
PPP4R1-207ENST00000578010 IGF1RP08069 1367 aa11.1□□□□□ -0.63
PPP4R1-207ENST00000578010 GRIN2AQ12879 1464 aa11.1□□□□□ -0.63
PPP4R1-207ENST00000578010 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
PPP4R1-207ENST00000578010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
PPP4R1-207ENST00000578010 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-207ENST00000578010 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
PPP4R1-207ENST00000578010 CLASP1Q7Z460 1538 aa11.08□□□□□ -0.64
PPP4R1-207ENST00000578010 FOXD4L1Q9NU39 408 aa11.07□□□□□ -0.64
PPP4R1-207ENST00000578010 ARHGEF11O15085 1522 aa11.07□□□□□ -0.64
PPP4R1-207ENST00000578010 CEP170Q5SW79 1584 aa11.06□□□□□ -0.64
PPP4R1-207ENST00000578010 EHMT2Q96KQ7 1210 aa11.05□□□□□ -0.64
PPP4R1-207ENST00000578010 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
PPP4R1-207ENST00000578010 CARMIL1Q5VZK9 1371 aa11.04□□□□□ -0.64
PPP4R1-207ENST00000578010 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-207ENST00000578010 APLP2Q06481 763 aa11.02□□□□□ -0.65
PPP4R1-207ENST00000578010 NUP160Q12769 1436 aa11.01□□□□□ -0.65
PPP4R1-207ENST00000578010 SAMD1Q6SPF0 538 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-207ENST00000578010 JPH4Q96JJ6 628 aa10.97□□□□□ -0.65
PPP4R1-207ENST00000578010 ARAP1Q96P48 1450 aa10.97□□□□□ -0.65
PPP4R1-207ENST00000578010 SHROOM2Q13796 1616 aa10.96□□□□□ -0.65
PPP4R1-207ENST00000578010 RAPGEF2Q9Y4G8 1499 aa10.95□□□□□ -0.66
PPP4R1-207ENST00000578010 UBTFP17480 764 aaKnown RBP10.95□□□□□ -0.66
PPP4R1-207ENST00000578010 CYB5RLQ6IPT4 315 aa10.95□□□□□ -0.66
PPP4R1-207ENST00000578010 CTTNBP2Q8WZ74 1663 aa10.95□□□□□ -0.66
PPP4R1-207ENST00000578010 ERCC6L2Q5T890 1561 aa10.94□□□□□ -0.66
PPP4R1-207ENST00000578010 EEA1Q15075 1411 aa10.94□□□□□ -0.66
PPP4R1-207ENST00000578010 ZBTB22O15209 634 aa10.94□□□□□ -0.66
PPP4R1-207ENST00000578010 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
PPP4R1-207ENST00000578010 IQGAP2Q13576 1575 aa10.92□□□□□ -0.66
PPP4R1-207ENST00000578010 KIAA0586Q9BVV6 1533 aa10.92□□□□□ -0.66
PPP4R1-207ENST00000578010 TTBK1Q5TCY1 1321 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-207ENST00000578010 PRG4Q92954 1404 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-207ENST00000578010 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
PPP4R1-207ENST00000578010 PRXQ9BXM0 1461 aa10.87□□□□□ -0.67
PPP4R1-207ENST00000578010 LOC105371045A0A1W2PR82 267 aa10.86□□□□□ -0.67
PPP4R1-207ENST00000578010 CAPN15O75808 1086 aa10.86□□□□□ -0.67
PPP4R1-207ENST00000578010 P3H3Q8IVL6 736 aa10.86□□□□□ -0.67
PPP4R1-207ENST00000578010 ZNF219Q9P2Y4 722 aaPredicted RBP10.85□□□□□ -0.67
PPP4R1-207ENST00000578010 CARMIL2Q6F5E8 1435 aa10.84□□□□□ -0.67
PPP4R1-207ENST00000578010 KIF21BO75037 1637 aa10.83□□□□□ -0.68
PPP4R1-207ENST00000578010 KIAA0556O60303 1618 aa10.82□□□□□ -0.68
PPP4R1-207ENST00000578010 UGGT2Q9NYU1 1516 aa10.81□□□□□ -0.68
PPP4R1-207ENST00000578010 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
PPP4R1-207ENST00000578010 TRHP20396 242 aaPredicted RBP10.79□□□□□ -0.68
PPP4R1-207ENST00000578010 GOLGA3Q08378 1498 aa10.78□□□□□ -0.68
PPP4R1-207ENST00000578010 DISP1Q96F81 1524 aa10.78□□□□□ -0.68
PPP4R1-207ENST00000578010 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.68
PPP4R1-207ENST00000578010 ADCY10Q96PN6 1610 aa10.77□□□□□ -0.68
PPP4R1-207ENST00000578010 PTPRGP23470 1445 aa10.77□□□□□ -0.68
PPP4R1-207ENST00000578010 NPM1P06748 294 aaKnown RBP eCLIP10.77□□□□□ -0.69
PPP4R1-207ENST00000578010 DSG3P32926 999 aa10.77□□□□□ -0.69
PPP4R1-207ENST00000578010 ATP1B4Q9UN42 357 aaPredicted RBP10.74□□□□□ -0.69
PPP4R1-207ENST00000578010 SAMD9Q5K651 1589 aa10.72□□□□□ -0.69
PPP4R1-207ENST00000578010 ABCC2Q92887 1545 aa10.71□□□□□ -0.69
PPP4R1-207ENST00000578010 UACAQ9BZF9 1416 aa10.7□□□□□ -0.7
PPP4R1-207ENST00000578010 ARID3CA6NKF2 412 aa10.7□□□□□ -0.7
PPP4R1-207ENST00000578010 KIF13AQ9H1H9 1805 aa10.69□□□□□ -0.7
PPP4R1-207ENST00000578010 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
PPP4R1-207ENST00000578010 EFCAB5A4FU69 1503 aa10.68□□□□□ -0.7
PPP4R1-207ENST00000578010 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
PPP4R1-207ENST00000578010 PLB1Q6P1J6 1458 aa10.68□□□□□ -0.7
PPP4R1-207ENST00000578010 UHRF1BP1LA0JNW5 1464 aa10.67□□□□□ -0.7
PPP4R1-207ENST00000578010 FHOD3Q2V2M9 1422 aa10.67□□□□□ -0.7
PPP4R1-207ENST00000578010 ABCA8O94911 1581 aa10.66□□□□□ -0.7
PPP4R1-207ENST00000578010 ATF5Q9Y2D1 282 aaPredicted RBP10.66□□□□□ -0.7
PPP4R1-207ENST00000578010 RAPGEF6Q8TEU7 1601 aa10.66□□□□□ -0.7
PPP4R1-207ENST00000578010 DIP2BQ9P265 1576 aa10.65□□□□□ -0.71
PPP4R1-207ENST00000578010 TSPOAP1O95153 1857 aa10.64□□□□□ -0.71
PPP4R1-207ENST00000578010 CLIP1P30622 1438 aa10.63□□□□□ -0.71
PPP4R1-207ENST00000578010 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
PPP4R1-207ENST00000578010 ASXL2Q76L83 1435 aa10.62□□□□□ -0.71
PPP4R1-207ENST00000578010 KCNH8Q96L42 1107 aa10.62□□□□□ -0.71
PPP4R1-207ENST00000578010 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
PPP4R1-207ENST00000578010 FAM69CQ0P6D2 419 aa10.61□□□□□ -0.71
PPP4R1-207ENST00000578010 ARHGAP35Q9NRY4 1499 aa10.6□□□□□ -0.71
PPP4R1-207ENST00000578010 PLEKHD1A6NEE1 506 aa10.59□□□□□ -0.71
PPP4R1-207ENST00000578010 ABCB7O75027 752 aa10.59□□□□□ -0.71
PPP4R1-207ENST00000578010 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
PPP4R1-207ENST00000578010 HECW1Q76N89 1606 aa10.58□□□□□ -0.72
PPP4R1-207ENST00000578010 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
PPP4R1-207ENST00000578010 POLA2Q14181 598 aa10.57□□□□□ -0.72
PPP4R1-207ENST00000578010 FMN1Q68DA7 1419 aa10.57□□□□□ -0.72
PPP4R1-207ENST00000578010 CDK11AQ9UQ88 783 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms