RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 HIRIP3Q9BW71 556 aaPredicted RBP6.48□□□□□ -1.37
NF1-218ENST00000577967 KANK4Q5T7N3 995 aaPredicted RBP6.48□□□□□ -1.37
NF1-218ENST00000577967 KDM2AQ9Y2K7 1162 aa6.48□□□□□ -1.37
NF1-218ENST00000577967 TSPY4P0CV99 314 aa6.47□□□□□ -1.37
NF1-218ENST00000577967 TSPY10P0CW01 314 aa6.47□□□□□ -1.37
NF1-218ENST00000577967 VPS8Q8N3P4 1428 aa6.47□□□□□ -1.37
NF1-218ENST00000577967 SENP3Q9H4L4 574 aaPredicted RBP6.47□□□□□ -1.37
NF1-218ENST00000577967 FHAD1B1AJZ9 1412 aa6.47□□□□□ -1.37
NF1-218ENST00000577967 GTF3C3Q9Y5Q9 886 aa6.46□□□□□ -1.37
NF1-218ENST00000577967 RAD54L2Q9Y4B4 1467 aa6.46□□□□□ -1.37
NF1-218ENST00000577967 FGD5Q6ZNL6 1462 aa6.46□□□□□ -1.37
NF1-218ENST00000577967 SYNJ1O43426 1573 aa6.46□□□□□ -1.38
NF1-218ENST00000577967 NCAPD3P42695 1498 aa6.46□□□□□ -1.38
NF1-218ENST00000577967 DDX10Q13206 875 aaKnown RBP6.46□□□□□ -1.38
NF1-218ENST00000577967 CFDP1Q9UEE9 299 aaPredicted RBP6.46□□□□□ -1.38
NF1-218ENST00000577967 FHOD3Q2V2M9 1422 aa6.45□□□□□ -1.38
NF1-218ENST00000577967 ESF1Q9H501 851 aaKnown RBP6.45□□□□□ -1.38
NF1-218ENST00000577967 STAG3Q9UJ98 1225 aa6.45□□□□□ -1.38
NF1-218ENST00000577967 ARHGAP35Q9NRY4 1499 aa6.44□□□□□ -1.38
NF1-218ENST00000577967 NESP48681 1621 aa6.44□□□□□ -1.38
NF1-218ENST00000577967 CCNB3Q8WWL7 1395 aa6.44□□□□□ -1.38
NF1-218ENST00000577967 SIN3AQ96ST3 1273 aa6.42□□□□□ -1.38
NF1-218ENST00000577967 HMGXB3Q12766 1538 aa6.41□□□□□ -1.38
NF1-218ENST00000577967 ACIN1Q9UKV3 1341 aaKnown RBP6.4□□□□□ -1.38
NF1-218ENST00000577967 MIER1Q8N108 512 aa6.4□□□□□ -1.38
NF1-218ENST00000577967 CARMIL2Q6F5E8 1435 aa6.39□□□□□ -1.39
NF1-218ENST00000577967 CUX1P39880 1505 aa6.39□□□□□ -1.39
NF1-218ENST00000577967 FMN1Q68DA7 1419 aa6.39□□□□□ -1.39
NF1-218ENST00000577967 RGL3Q3MIN7 710 aa6.39□□□□□ -1.39
NF1-218ENST00000577967 FAM9BQ8IZU0 186 aa6.39□□□□□ -1.39
NF1-218ENST00000577967 GAPVD1Q14C86 1478 aa6.39□□□□□ -1.39
NF1-218ENST00000577967 TOP2BQ02880 1626 aa6.39□□□□□ -1.39
NF1-218ENST00000577967 PRDM2Q13029 1718 aa6.38□□□□□ -1.39
NF1-218ENST00000577967 CFTRP13569 1480 aa6.38□□□□□ -1.39
NF1-218ENST00000577967 AQRO60306 1485 aaKnown RBP eCLIP6.38□□□□□ -1.392e-6■■■■■ 26.9
NF1-218ENST00000577967 SETD5Q9C0A6 1442 aa6.38□□□□□ -1.39
NF1-218ENST00000577967 KIF21BO75037 1637 aa6.38□□□□□ -1.39
NF1-218ENST00000577967 IGF1RP08069 1367 aa6.37□□□□□ -1.39
NF1-218ENST00000577967 SLC24A1O60721 1099 aa6.37□□□□□ -1.39
NF1-218ENST00000577967 FOXD1Q16676 465 aa6.36□□□□□ -1.39
NF1-218ENST00000577967 DAXXQ9UER7 740 aaPredicted RBP6.36□□□□□ -1.39
NF1-218ENST00000577967 SALL2Q9Y467 1007 aaPredicted RBP6.36□□□□□ -1.39
NF1-218ENST00000577967 EIF4G2P78344 907 aaKnown RBP eCLIP6.35□□□□□ -1.39
NF1-218ENST00000577967 HNRNPUQ00839 825 aaKnown RBP eCLIP6.35□□□□□ -1.39
NF1-218ENST00000577967 CLSPNQ9HAW4 1339 aa6.35□□□□□ -1.39
NF1-218ENST00000577967 CANXP27824 592 aaKnown RBP6.35□□□□□ -1.39
NF1-218ENST00000577967 RAB3GAP2Q9H2M9 1393 aa6.35□□□□□ -1.39
NF1-218ENST00000577967 ARID4BQ4LE39 1312 aaPredicted RBP6.35□□□□□ -1.39
NF1-218ENST00000577967 MRC2Q9UBG0 1479 aa6.35□□□□□ -1.39
NF1-218ENST00000577967 TOPBP1Q92547 1522 aa6.33□□□□□ -1.4
NF1-218ENST00000577967 BCL11AQ9H165 835 aa6.33□□□□□ -1.4
NF1-218ENST00000577967 HNRNPMP52272 730 aaKnown RBP eCLIP6.33□□□□□ -1.4
NF1-218ENST00000577967 FKBP8Q14318 412 aa6.33□□□□□ -1.4
NF1-218ENST00000577967 JPH4Q96JJ6 628 aa6.33□□□□□ -1.4
NF1-218ENST00000577967 DNMBPQ6XZF7 1577 aa6.33□□□□□ -1.4
NF1-218ENST00000577967 SENP3-EIF4A1A0A087X0R7 540 aa6.32□□□□□ -1.4
NF1-218ENST00000577967 CARD11Q9BXL7 1154 aa6.32□□□□□ -1.4
NF1-218ENST00000577967 CCDC18Q5T9S5 1454 aa6.32□□□□□ -1.4
NF1-218ENST00000577967 MRS2Q9HD23 443 aa6.31□□□□□ -1.4
NF1-218ENST00000577967 ERICH3Q5RHP9 1530 aa6.31□□□□□ -1.4
NF1-218ENST00000577967 NEFMP07197 916 aa6.31□□□□□ -1.4
NF1-218ENST00000577967 TMC1Q8TDI8 760 aa6.31□□□□□ -1.4
NF1-218ENST00000577967 PPP1R15AO75807 674 aaPredicted RBP6.31□□□□□ -1.4
NF1-218ENST00000577967 PEG3Q9GZU2 1588 aa6.31□□□□□ -1.4
NF1-218ENST00000577967 POLA1P09884 1462 aaPredicted RBP6.31□□□□□ -1.4
NF1-218ENST00000577967 ARAP1Q96P48 1450 aa6.3□□□□□ -1.4
NF1-218ENST00000577967 DNAJC5BQ9UF47 199 aa6.3□□□□□ -1.4
NF1-218ENST00000577967 DCAF11Q8TEB1 546 aa6.3□□□□□ -1.4
NF1-218ENST00000577967 PKD2Q13563 968 aa6.29□□□□□ -1.4
NF1-218ENST00000577967 MLECQ14165 292 aa6.29□□□□□ -1.4
NF1-218ENST00000577967 MPHOSPH9Q99550 1183 aa6.29□□□□□ -1.4
NF1-218ENST00000577967 GRIN2BQ13224 1484 aa6.29□□□□□ -1.4
NF1-218ENST00000577967 KANK1Q14678 1352 aa6.29□□□□□ -1.4
NF1-218ENST00000577967 WDR43Q15061 677 aaKnown RBP eCLIP6.29□□□□□ -1.4
NF1-218ENST00000577967 LAMC3Q9Y6N6 1575 aa6.29□□□□□ -1.4
NF1-218ENST00000577967 PLEKHG5O94827 1062 aa6.29□□□□□ -1.4
NF1-218ENST00000577967 IRX6P78412 446 aaPredicted RBP6.28□□□□□ -1.4
NF1-218ENST00000577967 SNAPC4Q5SXM2 1469 aa6.28□□□□□ -1.4
NF1-218ENST00000577967 TRHP20396 242 aaPredicted RBP6.28□□□□□ -1.4
NF1-218ENST00000577967 IFT140Q96RY7 1462 aa6.28□□□□□ -1.4
NF1-218ENST00000577967 BIVM-ERCC5R4GMW8 1640 aa6.28□□□□□ -1.4
NF1-218ENST00000577967 ANKRD30AQ9BXX3 1397 aa6.27□□□□□ -1.41
NF1-218ENST00000577967 ZBTB7CA1YPR0 619 aa6.27□□□□□ -1.41
NF1-218ENST00000577967 PTPRGP23470 1445 aa6.27□□□□□ -1.41
NF1-218ENST00000577967 HSPA5P11021 654 aaKnown RBP6.27□□□□□ -1.41
NF1-218ENST00000577967 LRRC9Q6ZRR7 1453 aa6.27□□□□□ -1.41
NF1-218ENST00000577967 GGT6Q6P531 493 aa6.26□□□□□ -1.41
NF1-218ENST00000577967 NUP155O75694 1391 aa6.26□□□□□ -1.41
NF1-218ENST00000577967 SCAF1Q9H7N4 1312 aaKnown RBP6.26□□□□□ -1.41
NF1-218ENST00000577967 CC2D1BQ5T0F9 858 aaKnown RBP6.26□□□□□ -1.41
NF1-218ENST00000577967 CASKIN1Q8WXD9 1431 aa6.25□□□□□ -1.41
NF1-218ENST00000577967 PRXQ9BXM0 1461 aa6.25□□□□□ -1.41
NF1-218ENST00000577967 DHX57Q6P158 1386 aaKnown RBP6.25□□□□□ -1.41
NF1-218ENST00000577967 EFCAB2Q5VUJ9 269 aa6.25□□□□□ -1.41
NF1-218ENST00000577967 PHLDB1Q86UU1 1377 aa6.25□□□□□ -1.41
NF1-218ENST00000577967 CUL7Q14999 1698 aa6.24□□□□□ -1.41
NF1-218ENST00000577967 C14orf37Q86TY3 774 aa6.24□□□□□ -1.41
NF1-218ENST00000577967 ZBTB47Q9UFB7 747 aaPredicted RBP6.24□□□□□ -1.41
NF1-218ENST00000577967 FYCO1Q9BQS8 1478 aa6.24□□□□□ -1.41
NF1-218ENST00000577967 URB2Q14146 1524 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms