RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
TOM1L1-223ENST00000576932 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
TOM1L1-223ENST00000576932 ZBTB22O15209 634 aa17.36■□□□□ 0.37
TOM1L1-223ENST00000576932 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
TOM1L1-223ENST00000576932 GRIN2BQ13224 1484 aa17.33■□□□□ 0.37
TOM1L1-223ENST00000576932 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
TOM1L1-223ENST00000576932 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
TOM1L1-223ENST00000576932 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
TOM1L1-223ENST00000576932 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.36
TOM1L1-223ENST00000576932 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
TOM1L1-223ENST00000576932 CUX1P39880 1505 aa17.21■□□□□ 0.34
TOM1L1-223ENST00000576932 PBRM1Q86U86 1689 aa17.18■□□□□ 0.34
TOM1L1-223ENST00000576932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
TOM1L1-223ENST00000576932 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
TOM1L1-223ENST00000576932 ABCA10Q8WWZ4 1543 aa17.12■□□□□ 0.33
TOM1L1-223ENST00000576932 ABCA5Q8WWZ7 1642 aa17.12■□□□□ 0.33
TOM1L1-223ENST00000576932 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
TOM1L1-223ENST00000576932 ERCC6L2Q5T890 1561 aa17.09■□□□□ 0.33
TOM1L1-223ENST00000576932 NUP160Q12769 1436 aa17.08■□□□□ 0.32
TOM1L1-223ENST00000576932 CEP170Q5SW79 1584 aa17.07■□□□□ 0.32
TOM1L1-223ENST00000576932 SHROOM2Q13796 1616 aa17.06■□□□□ 0.32
TOM1L1-223ENST00000576932 ATXN8OSP0DMR3 200 aa17.04■□□□□ 0.32
TOM1L1-223ENST00000576932 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
TOM1L1-223ENST00000576932 KIF13AQ9H1H9 1805 aa17.04■□□□□ 0.32
TOM1L1-223ENST00000576932 APLP2Q06481 763 aa17.03■□□□□ 0.32
TOM1L1-223ENST00000576932 ADAMTS12P58397 1594 aa17.02■□□□□ 0.31
TOM1L1-223ENST00000576932 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
TOM1L1-223ENST00000576932 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.3
TOM1L1-223ENST00000576932 ABCC10Q5T3U5 1492 aa16.94■□□□□ 0.3
TOM1L1-223ENST00000576932 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
TOM1L1-223ENST00000576932 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
TOM1L1-223ENST00000576932 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
TOM1L1-223ENST00000576932 PRG4Q92954 1404 aaPredicted RBP16.9■□□□□ 0.3
TOM1L1-223ENST00000576932 FAM69CQ0P6D2 419 aa16.89■□□□□ 0.29
TOM1L1-223ENST00000576932 JPH4Q96JJ6 628 aa16.87■□□□□ 0.29
TOM1L1-223ENST00000576932 DIP2BQ9P265 1576 aa16.86■□□□□ 0.29
TOM1L1-223ENST00000576932 KDM4FA0A1W2PPD8 638 aa16.86■□□□□ 0.29
TOM1L1-223ENST00000576932 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
TOM1L1-223ENST00000576932 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
TOM1L1-223ENST00000576932 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
TOM1L1-223ENST00000576932 KDM6BO15054 1643 aa16.83■□□□□ 0.28
TOM1L1-223ENST00000576932 ILDR1Q86SU0 546 aaPredicted RBP16.81■□□□□ 0.28
TOM1L1-223ENST00000576932 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
TOM1L1-223ENST00000576932 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
TOM1L1-223ENST00000576932 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
TOM1L1-223ENST00000576932 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
TOM1L1-223ENST00000576932 KIAA0586Q9BVV6 1533 aa16.69■□□□□ 0.26
TOM1L1-223ENST00000576932 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
TOM1L1-223ENST00000576932 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
TOM1L1-223ENST00000576932 GLI2P10070 1586 aa16.62■□□□□ 0.25
TOM1L1-223ENST00000576932 PLB1Q6P1J6 1458 aa16.6■□□□□ 0.25
TOM1L1-223ENST00000576932 ABCC2Q92887 1545 aa16.6■□□□□ 0.25
TOM1L1-223ENST00000576932 PTPRGP23470 1445 aa16.59■□□□□ 0.25
TOM1L1-223ENST00000576932 PPRC1Q5VV67 1664 aaKnown RBP16.58■□□□□ 0.24
TOM1L1-223ENST00000576932 CUL7Q14999 1698 aa16.56■□□□□ 0.24
TOM1L1-223ENST00000576932 ASXL2Q76L83 1435 aa16.56■□□□□ 0.24
TOM1L1-223ENST00000576932 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
TOM1L1-223ENST00000576932 HECW2Q9P2P5 1572 aa16.55■□□□□ 0.24
TOM1L1-223ENST00000576932 IGF1RP08069 1367 aa16.54■□□□□ 0.24
TOM1L1-223ENST00000576932 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
TOM1L1-223ENST00000576932 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
TOM1L1-223ENST00000576932 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
TOM1L1-223ENST00000576932 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
TOM1L1-223ENST00000576932 TEX14Q8IWB6 1497 aa16.49■□□□□ 0.23
TOM1L1-223ENST00000576932 COL17A1Q9UMD9 1497 aaPredicted RBP16.49■□□□□ 0.23
TOM1L1-223ENST00000576932 SUPT5HO00267 1087 aaKnown RBP16.49■□□□□ 0.23
TOM1L1-223ENST00000576932 CAPN15O75808 1086 aa16.48■□□□□ 0.23
TOM1L1-223ENST00000576932 MAP3K4Q9Y6R4 1608 aa16.48■□□□□ 0.23
TOM1L1-223ENST00000576932 EPRSP07814 1512 aaKnown RBP16.47■□□□□ 0.23
TOM1L1-223ENST00000576932 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
TOM1L1-223ENST00000576932 UACAQ9BZF9 1416 aa16.46■□□□□ 0.23
TOM1L1-223ENST00000576932 KDM5BQ9UGL1 1544 aa16.45■□□□□ 0.22
TOM1L1-223ENST00000576932 IQGAP2Q13576 1575 aa16.42■□□□□ 0.22
TOM1L1-223ENST00000576932 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
TOM1L1-223ENST00000576932 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
TOM1L1-223ENST00000576932 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
TOM1L1-223ENST00000576932 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
TOM1L1-223ENST00000576932 ZCCHC11Q5TAX3 1644 aaKnown RBP16.36■□□□□ 0.21
TOM1L1-223ENST00000576932 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
TOM1L1-223ENST00000576932 WDR7Q9Y4E6 1490 aa16.34■□□□□ 0.21
TOM1L1-223ENST00000576932 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
TOM1L1-223ENST00000576932 UGGT2Q9NYU1 1516 aa16.34■□□□□ 0.21
TOM1L1-223ENST00000576932 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
TOM1L1-223ENST00000576932 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
TOM1L1-223ENST00000576932 CD109Q6YHK3 1445 aa16.28■□□□□ 0.2
TOM1L1-223ENST00000576932 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
TOM1L1-223ENST00000576932 ARAP3Q8WWN8 1544 aa16.22■□□□□ 0.19
TOM1L1-223ENST00000576932 KIF21BO75037 1637 aa16.22■□□□□ 0.19
TOM1L1-223ENST00000576932 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
TOM1L1-223ENST00000576932 ZBTB12Q9Y330 459 aaPredicted RBP16.19■□□□□ 0.18
TOM1L1-223ENST00000576932 PTPRMP28827 1452 aa16.18■□□□□ 0.18
TOM1L1-223ENST00000576932 POLA2Q14181 598 aa16.18■□□□□ 0.18
TOM1L1-223ENST00000576932 ADAMTSL3P82987 1691 aa16.18■□□□□ 0.18
TOM1L1-223ENST00000576932 ABCA8O94911 1581 aa16.17■□□□□ 0.18
TOM1L1-223ENST00000576932 PHLDB1Q86UU1 1377 aa16.17■□□□□ 0.18
TOM1L1-223ENST00000576932 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
TOM1L1-223ENST00000576932 KCNH8Q96L42 1107 aa16.14■□□□□ 0.17
TOM1L1-223ENST00000576932 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
TOM1L1-223ENST00000576932 CTTNBP2Q8WZ74 1663 aa16.1■□□□□ 0.17
TOM1L1-223ENST00000576932 LMTK3Q96Q04 1460 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms