RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 HNRNPUQ00839 825 aaKnown RBP eCLIP20.44■□□□□ 0.86
SCARF1-209ENST00000576012 CCNB3Q8WWL7 1395 aa20.41■□□□□ 0.86
SCARF1-209ENST00000576012 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-209ENST00000576012 P3H3Q8IVL6 736 aa20.4■□□□□ 0.86
SCARF1-209ENST00000576012 CDK11AQ9UQ88 783 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-209ENST00000576012 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
SCARF1-209ENST00000576012 NBR1Q14596 966 aa20.35■□□□□ 0.85
SCARF1-209ENST00000576012 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.84
SCARF1-209ENST00000576012 ARAP1Q96P48 1450 aa20.31■□□□□ 0.84
SCARF1-209ENST00000576012 WDR97A6NE52 1622 aa20.3■□□□□ 0.84
SCARF1-209ENST00000576012 B4GALNT3Q6L9W6 998 aa20.27■□□□□ 0.84
SCARF1-209ENST00000576012 CFTRP13569 1480 aa20.24■□□□□ 0.83
SCARF1-209ENST00000576012 DEKP35659 375 aaKnown RBP20.23■□□□□ 0.83
SCARF1-209ENST00000576012 RRBP1Q9P2E9 1410 aaKnown RBP20.23■□□□□ 0.83
SCARF1-209ENST00000576012 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
SCARF1-209ENST00000576012 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
SCARF1-209ENST00000576012 FAM9BQ8IZU0 186 aa20.2■□□□□ 0.82
SCARF1-209ENST00000576012 MAPKBP1O60336 1514 aa20.2■□□□□ 0.82
SCARF1-209ENST00000576012 CCER2I3L3R5 266 aa20.19■□□□□ 0.82
SCARF1-209ENST00000576012 SETD5Q9C0A6 1442 aa20.18■□□□□ 0.82
SCARF1-209ENST00000576012 CCDC184Q52MB2 194 aa20.14■□□□□ 0.81
SCARF1-209ENST00000576012 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
SCARF1-209ENST00000576012 TONSLQ96HA7 1378 aa20.13■□□□□ 0.81
SCARF1-209ENST00000576012 PHLDB1Q86UU1 1377 aa20.1■□□□□ 0.81
SCARF1-209ENST00000576012 NESP48681 1621 aa20.09■□□□□ 0.81
SCARF1-209ENST00000576012 PAK3O75914 559 aaPredicted RBP20.09■□□□□ 0.81
SCARF1-209ENST00000576012 TOP2BQ02880 1626 aa20.07■□□□□ 0.8
SCARF1-209ENST00000576012 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
SCARF1-209ENST00000576012 CUX1P39880 1505 aa20.05■□□□□ 0.8
SCARF1-209ENST00000576012 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
SCARF1-209ENST00000576012 PRXQ9BXM0 1461 aa20.04■□□□□ 0.8
SCARF1-209ENST00000576012 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
SCARF1-209ENST00000576012 PPP4R2Q9NY27 417 aa20.03■□□□□ 0.8
SCARF1-209ENST00000576012 ANO8Q9HCE9 1232 aaPredicted RBP20.03■□□□□ 0.8
SCARF1-209ENST00000576012 PRDM2Q13029 1718 aa20.02■□□□□ 0.8
SCARF1-209ENST00000576012 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
SCARF1-209ENST00000576012 CUX2O14529 1486 aa20■□□□□ 0.79
SCARF1-209ENST00000576012 BIVM-ERCC5R4GMW8 1640 aa19.99■□□□□ 0.79
SCARF1-209ENST00000576012 NOP58Q9Y2X3 529 aaKnown RBP19.99■□□□□ 0.79
SCARF1-209ENST00000576012 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
SCARF1-209ENST00000576012 CHIC2Q9UKJ5 165 aa19.97■□□□□ 0.79
SCARF1-209ENST00000576012 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
SCARF1-209ENST00000576012 HSPA5P11021 654 aaKnown RBP19.96■□□□□ 0.79
SCARF1-209ENST00000576012 NPM2Q86SE8 214 aaKnown RBP19.96■□□□□ 0.79
SCARF1-209ENST00000576012 CCDC136Q96JN2 1154 aa19.94■□□□□ 0.78
SCARF1-209ENST00000576012 WASHC2AQ641Q2 1341 aa19.92■□□□□ 0.78
SCARF1-209ENST00000576012 RRP7BPQ9NSQ0 103 aa19.91■□□□□ 0.78
SCARF1-209ENST00000576012 FOXD1Q16676 465 aa19.91■□□□□ 0.78
SCARF1-209ENST00000576012 ARID3CA6NKF2 412 aa19.9■□□□□ 0.78
SCARF1-209ENST00000576012 LAMC3Q9Y6N6 1575 aa19.9■□□□□ 0.78
SCARF1-209ENST00000576012 RTL5Q5HYW3 569 aaPredicted RBP19.9■□□□□ 0.78
SCARF1-209ENST00000576012 TIMELESSQ9UNS1 1208 aa19.87■□□□□ 0.77
SCARF1-209ENST00000576012 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
SCARF1-209ENST00000576012 SALL2Q9Y467 1007 aaPredicted RBP19.87■□□□□ 0.77
SCARF1-209ENST00000576012 IL27Q8NEV9 243 aa19.86■□□□□ 0.77
SCARF1-209ENST00000576012 LRRC9Q6ZRR7 1453 aa19.85■□□□□ 0.77
SCARF1-209ENST00000576012 C11orf95C9JLR9 678 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-209ENST00000576012 DAXXQ9UER7 740 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-209ENST00000576012 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
SCARF1-209ENST00000576012 PDS5BQ9NTI5 1447 aa19.84■□□□□ 0.77
SCARF1-209ENST00000576012 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.83■□□□□ 0.77
SCARF1-209ENST00000576012 ANP32AP39687 249 aaKnown RBP19.83■□□□□ 0.76
SCARF1-209ENST00000576012 LAS1LQ9Y4W2 734 aaKnown RBP19.82■□□□□ 0.76
SCARF1-209ENST00000576012 ZBTB47Q9UFB7 747 aaPredicted RBP19.82■□□□□ 0.76
SCARF1-209ENST00000576012 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
SCARF1-209ENST00000576012 FHOD3Q2V2M9 1422 aa19.79■□□□□ 0.76
SCARF1-209ENST00000576012 TIAM1Q13009 1591 aa19.78■□□□□ 0.76
SCARF1-209ENST00000576012 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
SCARF1-209ENST00000576012 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
SCARF1-209ENST00000576012 ZNF326Q5BKZ1 582 aaKnown RBP19.77■□□□□ 0.76
SCARF1-209ENST00000576012 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
SCARF1-209ENST00000576012 IGF1RP08069 1367 aa19.77■□□□□ 0.76
SCARF1-209ENST00000576012 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.75
SCARF1-209ENST00000576012 MYT1LQ9UL68 1186 aa19.77■□□□□ 0.75
SCARF1-209ENST00000576012 AKNAQ7Z591 1439 aa19.76■□□□□ 0.75
SCARF1-209ENST00000576012 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
SCARF1-209ENST00000576012 KIF21AQ7Z4S6 1674 aa19.73■□□□□ 0.75
SCARF1-209ENST00000576012 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
SCARF1-209ENST00000576012 EIF5BO60841 1220 aaKnown RBP19.72■□□□□ 0.75
SCARF1-209ENST00000576012 IPO9Q96P70 1041 aaKnown RBP19.72■□□□□ 0.75
SCARF1-209ENST00000576012 L3MBTL2Q969R5 705 aa19.71■□□□□ 0.75
SCARF1-209ENST00000576012 CCDC18Q5T9S5 1454 aa19.71■□□□□ 0.75
SCARF1-209ENST00000576012 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
SCARF1-209ENST00000576012 AQRO60306 1485 aaKnown RBP eCLIP19.7■□□□□ 0.74
SCARF1-209ENST00000576012 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
SCARF1-209ENST00000576012 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
SCARF1-209ENST00000576012 ERICH6BQ5W0A0 696 aa19.68■□□□□ 0.74
SCARF1-209ENST00000576012 ZBED9Q6R2W3 1325 aa19.67■□□□□ 0.74
SCARF1-209ENST00000576012 NEFMP07197 916 aa19.65■□□□□ 0.74
SCARF1-209ENST00000576012 SKAP1Q86WV1 359 aa19.63■□□□□ 0.73
SCARF1-209ENST00000576012 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
SCARF1-209ENST00000576012 NBPF8Q3BBV2 869 aa19.6■□□□□ 0.73
SCARF1-209ENST00000576012 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
SCARF1-209ENST00000576012 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
SCARF1-209ENST00000576012 UACAQ9BZF9 1416 aa19.59■□□□□ 0.73
SCARF1-209ENST00000576012 FGD6Q6ZV73 1430 aa19.59■□□□□ 0.73
SCARF1-209ENST00000576012 CNTLNQ9NXG0 1405 aa19.59■□□□□ 0.73
SCARF1-209ENST00000576012 ABCA10Q8WWZ4 1543 aa19.58■□□□□ 0.72
SCARF1-209ENST00000576012 PCF11O94913 1555 aaKnown RBP19.58■□□□□ 0.72
SCARF1-209ENST00000576012 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms