RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, human

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC4-206	ENST00000574781	SOGA1	O94964	1423 aa		14.49	□□□□□ -0.09
ERCC4-206	ENST00000574781	TARBP1	Q13395	1621 aa	Known RBP	14.47	□□□□□ -0.09
ERCC4-206	ENST00000574781	SUPT5H	O00267	1087 aa	Known RBP	14.46	□□□□□ -0.09
ERCC4-206	ENST00000574781	TRH	P20396	242 aa	Predicted RBP	14.45	□□□□□ -0.1
ERCC4-206	ENST00000574781	ABCB7	O75027	752 aa		14.44	□□□□□ -0.1
ERCC4-206	ENST00000574781	CHMP7	Q8WUX9	453 aa	Predicted RBP	14.43	□□□□□ -0.1
ERCC4-206	ENST00000574781	CHD1	O14646	1710 aa		14.41	□□□□□ -0.1
ERCC4-206	ENST00000574781	FGD5	Q6ZNL6	1462 aa		14.39	□□□□□ -0.11
ERCC4-206	ENST00000574781	RBM42	Q9BTD8	480 aa	Known RBP	14.38	□□□□□ -0.11
ERCC4-206	ENST00000574781	SNAPC4	Q5SXM2	1469 aa		14.37	□□□□□ -0.11
ERCC4-206	ENST00000574781	CUX1	P39880	1505 aa		14.36	□□□□□ -0.11
ERCC4-206	ENST00000574781	ARAP1	Q96P48	1450 aa		14.35	□□□□□ -0.11
ERCC4-206	ENST00000574781	GRIN2B	Q13224	1484 aa		14.3	□□□□□ -0.12
ERCC4-206	ENST00000574781	MAGI1	Q96QZ7	1491 aa	Predicted RBP	14.27	□□□□□ -0.12
ERCC4-206	ENST00000574781	GAPVD1	Q14C86	1478 aa		14.26	□□□□□ -0.13
ERCC4-206	ENST00000574781	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.26	□□□□□ -0.13
ERCC4-206	ENST00000574781	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.26	□□□□□ -0.13
ERCC4-206	ENST00000574781	FOXD4L1	Q9NU39	408 aa		14.26	□□□□□ -0.13
ERCC4-206	ENST00000574781	SYNJ2	O15056	1496 aa		14.25	□□□□□ -0.13
ERCC4-206	ENST00000574781	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.25	□□□□□ -0.13
ERCC4-206	ENST00000574781	SYNJ1	O43426	1573 aa		14.23	□□□□□ -0.13
ERCC4-206	ENST00000574781	CLASP1	Q7Z460	1538 aa		14.23	□□□□□ -0.13
ERCC4-206	ENST00000574781	MYCN	P04198	464 aa	Predicted RBP	14.22	□□□□□ -0.13
ERCC4-206	ENST00000574781	WDR97	A6NE52	1622 aa		14.21	□□□□□ -0.13
ERCC4-206	ENST00000574781	ABCA10	Q8WWZ4	1543 aa		14.19	□□□□□ -0.14
ERCC4-206	ENST00000574781	WRN	Q14191	1432 aa	Predicted RBP eCLIP	14.18	□□□□□ -0.14
ERCC4-206	ENST00000574781	APLP2	Q06481	763 aa		14.18	□□□□□ -0.14
ERCC4-206	ENST00000574781	SAMD1	Q6SPF0	538 aa	Predicted RBP	14.17	□□□□□ -0.14
ERCC4-206	ENST00000574781	PBRM1	Q86U86	1689 aa		14.16	□□□□□ -0.14
ERCC4-206	ENST00000574781	ABCA5	Q8WWZ7	1642 aa		14.12	□□□□□ -0.15
ERCC4-206	ENST00000574781	ZBTB22	O15209	634 aa		14.11	□□□□□ -0.15
ERCC4-206	ENST00000574781	GRIN2A	Q12879	1464 aa		14.11	□□□□□ -0.15
ERCC4-206	ENST00000574781	HAX1	O00165	279 aa		14.1	□□□□□ -0.15
ERCC4-206	ENST00000574781	ERCC6L2	Q5T890	1561 aa		14.09	□□□□□ -0.15
ERCC4-206	ENST00000574781	FHAD1	B1AJZ9	1412 aa		14.07	□□□□□ -0.16
ERCC4-206	ENST00000574781	TOP2B	Q02880	1626 aa		14.06	□□□□□ -0.16
ERCC4-206	ENST00000574781	CEP170	Q5SW79	1584 aa		14.05	□□□□□ -0.16
ERCC4-206	ENST00000574781	JPH4	Q96JJ6	628 aa		14.05	□□□□□ -0.16
ERCC4-206	ENST00000574781	NUP160	Q12769	1436 aa		14.05	□□□□□ -0.16
ERCC4-206	ENST00000574781	ADAMTS12	P58397	1594 aa		14.03	□□□□□ -0.16
ERCC4-206	ENST00000574781	BIVM-ERCC5	R4GMW8	1640 aa		14.03	□□□□□ -0.16
ERCC4-206	ENST00000574781	PRG4	Q92954	1404 aa	Predicted RBP	14.01	□□□□□ -0.17
ERCC4-206	ENST00000574781	PLSCR2	Q9NRY7	297 aa		14	□□□□□ -0.17
ERCC4-206	ENST00000574781	ERICH3	Q5RHP9	1530 aa		13.99	□□□□□ -0.17
ERCC4-206	ENST00000574781	NPM1	P06748	294 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
ERCC4-206	ENST00000574781	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.94	□□□□□ -0.18
ERCC4-206	ENST00000574781	SHROOM2	Q13796	1616 aa		13.93	□□□□□ -0.18
ERCC4-206	ENST00000574781	FAM69C	Q0P6D2	419 aa		13.92	□□□□□ -0.18
ERCC4-206	ENST00000574781	IGF1R	P08069	1367 aa		13.92	□□□□□ -0.18
ERCC4-206	ENST00000574781	ATXN8OS	P0DMR3	200 aa		13.9	□□□□□ -0.18
ERCC4-206	ENST00000574781	PIP4P2	Q8N4L2	257 aa		13.89	□□□□□ -0.19
ERCC4-206	ENST00000574781	KIF27	Q86VH2	1401 aa		13.86	□□□□□ -0.19
ERCC4-206	ENST00000574781	CSRNP3	Q8WYN3	585 aa		13.85	□□□□□ -0.19
ERCC4-206	ENST00000574781	RUSC2	Q8N2Y8	1516 aa		13.83	□□□□□ -0.2
ERCC4-206	ENST00000574781	KIAA0586	Q9BVV6	1533 aa		13.83	□□□□□ -0.2
ERCC4-206	ENST00000574781	CARMIL1	Q5VZK9	1371 aa		13.82	□□□□□ -0.2
ERCC4-206	ENST00000574781	KIF13A	Q9H1H9	1805 aa		13.8	□□□□□ -0.2
ERCC4-206	ENST00000574781	ABCC10	Q5T3U5	1492 aa		13.8	□□□□□ -0.2
ERCC4-206	ENST00000574781	PTPRG	P23470	1445 aa		13.79	□□□□□ -0.2
ERCC4-206	ENST00000574781	ADCY10	Q96PN6	1610 aa		13.77	□□□□□ -0.21
ERCC4-206	ENST00000574781	AKT1S1	Q96B36	256 aa		13.76	□□□□□ -0.21
ERCC4-206	ENST00000574781	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.76	□□□□□ -0.21
ERCC4-206	ENST00000574781	CUL7	Q14999	1698 aa		13.73	□□□□□ -0.21
ERCC4-206	ENST00000574781	LHX8	Q68G74	356 aa		13.73	□□□□□ -0.21
ERCC4-206	ENST00000574781	EHMT2	Q96KQ7	1210 aa		13.73	□□□□□ -0.21
ERCC4-206	ENST00000574781	MAPKBP1	O60336	1514 aa		13.73	□□□□□ -0.21
ERCC4-206	ENST00000574781	TNIK	Q9UKE5	1360 aa		13.72	□□□□□ -0.21
ERCC4-206	ENST00000574781	CARMIL2	Q6F5E8	1435 aa		13.72	□□□□□ -0.21
ERCC4-206	ENST00000574781	DIP2B	Q9P265	1576 aa		13.71	□□□□□ -0.22
ERCC4-206	ENST00000574781	POLA2	Q14181	598 aa		13.69	□□□□□ -0.22
ERCC4-206	ENST00000574781	TSPOAP1	O95153	1857 aa		13.68	□□□□□ -0.22
ERCC4-206	ENST00000574781	KDM4F	A0A1W2PPD8	638 aa		13.68	□□□□□ -0.22
ERCC4-206	ENST00000574781	EVX2	Q03828	476 aa		13.67	□□□□□ -0.22
ERCC4-206	ENST00000574781	ASXL2	Q76L83	1435 aa		13.65	□□□□□ -0.22
ERCC4-206	ENST00000574781	IQGAP2	Q13576	1575 aa		13.65	□□□□□ -0.22
ERCC4-206	ENST00000574781	ABCC2	Q92887	1545 aa		13.64	□□□□□ -0.23
ERCC4-206	ENST00000574781	REM2	Q8IYK8	340 aa	Predicted RBP	13.64	□□□□□ -0.23
ERCC4-206	ENST00000574781	KDM6B	O15054	1643 aa		13.64	□□□□□ -0.23
ERCC4-206	ENST00000574781	UACA	Q9BZF9	1416 aa		13.64	□□□□□ -0.23
ERCC4-206	ENST00000574781	RAPGEF2	Q9Y4G8	1499 aa		13.63	□□□□□ -0.23
ERCC4-206	ENST00000574781	DISP1	Q96F81	1524 aa		13.63	□□□□□ -0.23
ERCC4-206	ENST00000574781	PLB1	Q6P1J6	1458 aa		13.61	□□□□□ -0.23
ERCC4-206	ENST00000574781	KCNH8	Q96L42	1107 aa		13.59	□□□□□ -0.23
ERCC4-206	ENST00000574781	UHRF1BP1L	A0JNW5	1464 aa		13.58	□□□□□ -0.24
ERCC4-206	ENST00000574781	FXR2	P51116	673 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
ERCC4-206	ENST00000574781	ARID3C	A6NKF2	412 aa		13.56	□□□□□ -0.24
ERCC4-206	ENST00000574781	P3H3	Q8IVL6	736 aa		13.56	□□□□□ -0.24
ERCC4-206	ENST00000574781	UGGT2	Q9NYU1	1516 aa		13.55	□□□□□ -0.24
ERCC4-206	ENST00000574781	EPRS	P07814	1512 aa	Known RBP	13.54	□□□□□ -0.24
ERCC4-206	ENST00000574781	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.54	□□□□□ -0.24
ERCC4-206	ENST00000574781	KDM5B	Q9UGL1	1544 aa		13.54	□□□□□ -0.24
ERCC4-206	ENST00000574781	GLI2	P10070	1586 aa		13.53	□□□□□ -0.24
ERCC4-206	ENST00000574781	KIAA0556	O60303	1618 aa		13.51	□□□□□ -0.25
ERCC4-206	ENST00000574781	PITPNM1	O00562	1244 aa		13.5	□□□□□ -0.25
ERCC4-206	ENST00000574781	RANGAP1	P46060	587 aa	Predicted RBP	13.5	□□□□□ -0.25
ERCC4-206	ENST00000574781	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.5	□□□□□ -0.25
ERCC4-206	ENST00000574781	PPRC1	Q5VV67	1664 aa	Known RBP	13.5	□□□□□ -0.25
ERCC4-206	ENST00000574781	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.5	□□□□□ -0.25
ERCC4-206	ENST00000574781	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.48	□□□□□ -0.25
ERCC4-206	ENST00000574781	WDR7	Q9Y4E6	1490 aa		13.47	□□□□□ -0.25

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