RNA–Protein interactions for RNA: ENST00000574744.1

TOM1L1-219, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-219ENST00000574744 ZBTB22O15209 634 aa14.76□□□□□ -0.05
TOM1L1-219ENST00000574744 CARMIL1Q5VZK9 1371 aa14.74□□□□□ -0.05
TOM1L1-219ENST00000574744 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
TOM1L1-219ENST00000574744 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
TOM1L1-219ENST00000574744 IFT140Q96RY7 1462 aa14.73□□□□□ -0.05
TOM1L1-219ENST00000574744 CLIP1P30622 1438 aa14.72□□□□□ -0.05
TOM1L1-219ENST00000574744 GAPVD1Q14C86 1478 aa14.71□□□□□ -0.05
TOM1L1-219ENST00000574744 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
TOM1L1-219ENST00000574744 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
TOM1L1-219ENST00000574744 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
TOM1L1-219ENST00000574744 PBRM1Q86U86 1689 aa14.64□□□□□ -0.07
TOM1L1-219ENST00000574744 TDRD9Q8NDG6 1382 aaKnown RBP14.63□□□□□ -0.07
TOM1L1-219ENST00000574744 VPS8Q8N3P4 1428 aa14.63□□□□□ -0.07
TOM1L1-219ENST00000574744 GRIN2BQ13224 1484 aa14.62□□□□□ -0.07
TOM1L1-219ENST00000574744 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
TOM1L1-219ENST00000574744 TRIM26Q12899 539 aaPredicted RBP14.6□□□□□ -0.07
TOM1L1-219ENST00000574744 FHAD1B1AJZ9 1412 aa14.59□□□□□ -0.07
TOM1L1-219ENST00000574744 CTTNBP2Q8WZ74 1663 aa14.59□□□□□ -0.07
TOM1L1-219ENST00000574744 ADAMTS12P58397 1594 aa14.58□□□□□ -0.08
TOM1L1-219ENST00000574744 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
TOM1L1-219ENST00000574744 EFCAB5A4FU69 1503 aa14.56□□□□□ -0.08
TOM1L1-219ENST00000574744 ARHGAP35Q9NRY4 1499 aa14.56□□□□□ -0.08
TOM1L1-219ENST00000574744 EIF4G3O43432 1585 aaKnown RBP14.55□□□□□ -0.08
TOM1L1-219ENST00000574744 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.08
TOM1L1-219ENST00000574744 ZNF608Q9ULD9 1512 aaPredicted RBP14.53□□□□□ -0.08
TOM1L1-219ENST00000574744 MAGI1Q96QZ7 1491 aaPredicted RBP14.52□□□□□ -0.08
TOM1L1-219ENST00000574744 PCGF6Q9BYE7 350 aa14.49□□□□□ -0.09
TOM1L1-219ENST00000574744 SAMD9Q5K651 1589 aa14.47□□□□□ -0.09
TOM1L1-219ENST00000574744 MAP3K1Q13233 1512 aa14.46□□□□□ -0.09
TOM1L1-219ENST00000574744 SNAPC4Q5SXM2 1469 aa14.46□□□□□ -0.09
TOM1L1-219ENST00000574744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
TOM1L1-219ENST00000574744 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
TOM1L1-219ENST00000574744 GRIN2AQ12879 1464 aa14.43□□□□□ -0.1
TOM1L1-219ENST00000574744 APLP2Q06481 763 aa14.42□□□□□ -0.1
TOM1L1-219ENST00000574744 IQGAP2Q13576 1575 aa14.42□□□□□ -0.1
TOM1L1-219ENST00000574744 KIAA0586Q9BVV6 1533 aa14.4□□□□□ -0.1
TOM1L1-219ENST00000574744 UGGT2Q9NYU1 1516 aa14.4□□□□□ -0.1
TOM1L1-219ENST00000574744 FMN1Q68DA7 1419 aa14.4□□□□□ -0.1
TOM1L1-219ENST00000574744 FYCO1Q9BQS8 1478 aa14.38□□□□□ -0.11
TOM1L1-219ENST00000574744 RANGAP1P46060 587 aaPredicted RBP14.37□□□□□ -0.11
TOM1L1-219ENST00000574744 CASKIN1Q8WXD9 1431 aa14.37□□□□□ -0.11
TOM1L1-219ENST00000574744 NUP160Q12769 1436 aa14.35□□□□□ -0.11
TOM1L1-219ENST00000574744 CFAP43Q8NDM7 1665 aa14.35□□□□□ -0.11
TOM1L1-219ENST00000574744 TIAM1Q13009 1591 aa14.34□□□□□ -0.11
TOM1L1-219ENST00000574744 FHOD3Q2V2M9 1422 aa14.34□□□□□ -0.11
TOM1L1-219ENST00000574744 PCF11O94913 1555 aaKnown RBP14.34□□□□□ -0.11
TOM1L1-219ENST00000574744 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
TOM1L1-219ENST00000574744 CEP170Q5SW79 1584 aa14.3□□□□□ -0.12
TOM1L1-219ENST00000574744 CHMP7Q8WUX9 453 aaPredicted RBP14.3□□□□□ -0.12
TOM1L1-219ENST00000574744 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
TOM1L1-219ENST00000574744 PPARGC1BQ86YN6 1023 aaKnown RBP14.28□□□□□ -0.12
TOM1L1-219ENST00000574744 KIAA0556O60303 1618 aa14.27□□□□□ -0.12
TOM1L1-219ENST00000574744 LRRC9Q6ZRR7 1453 aa14.26□□□□□ -0.13
TOM1L1-219ENST00000574744 DISP1Q96F81 1524 aa14.25□□□□□ -0.13
TOM1L1-219ENST00000574744 CCDC18Q5T9S5 1454 aa14.25□□□□□ -0.13
TOM1L1-219ENST00000574744 HECW1Q76N89 1606 aa14.23□□□□□ -0.13
TOM1L1-219ENST00000574744 RRBP1Q9P2E9 1410 aaKnown RBP14.23□□□□□ -0.13
TOM1L1-219ENST00000574744 HRCP23327 699 aa14.22□□□□□ -0.13
TOM1L1-219ENST00000574744 P3H3Q8IVL6 736 aa14.22□□□□□ -0.13
TOM1L1-219ENST00000574744 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
TOM1L1-219ENST00000574744 CARMIL2Q6F5E8 1435 aa14.2□□□□□ -0.14
TOM1L1-219ENST00000574744 CHD1O14646 1710 aa14.2□□□□□ -0.14
TOM1L1-219ENST00000574744 LRRIQ1Q96JM4 1722 aa14.17□□□□□ -0.14
TOM1L1-219ENST00000574744 EHBP1L1Q8N3D4 1523 aa14.16□□□□□ -0.14
TOM1L1-219ENST00000574744 SHROOM2Q13796 1616 aa14.16□□□□□ -0.14
TOM1L1-219ENST00000574744 TTBK1Q5TCY1 1321 aaPredicted RBP14.15□□□□□ -0.14
TOM1L1-219ENST00000574744 FBLN2P98095 1184 aa14.15□□□□□ -0.14
TOM1L1-219ENST00000574744 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
TOM1L1-219ENST00000574744 ZEB1P37275 1124 aaPredicted RBP14.14□□□□□ -0.15
TOM1L1-219ENST00000574744 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
TOM1L1-219ENST00000574744 RAPGEF6Q8TEU7 1601 aa14.14□□□□□ -0.15
TOM1L1-219ENST00000574744 EPRSP07814 1512 aaKnown RBP14.14□□□□□ -0.15
TOM1L1-219ENST00000574744 CCNB3Q8WWL7 1395 aa14.13□□□□□ -0.15
TOM1L1-219ENST00000574744 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.13□□□□□ -0.15
TOM1L1-219ENST00000574744 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
TOM1L1-219ENST00000574744 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
TOM1L1-219ENST00000574744 MTUS2Q5JR59 1369 aa14.1□□□□□ -0.15
TOM1L1-219ENST00000574744 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
TOM1L1-219ENST00000574744 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
TOM1L1-219ENST00000574744 NUP153P49790 1475 aaKnown RBP14.08□□□□□ -0.16
TOM1L1-219ENST00000574744 ATP1B4Q9UN42 357 aaPredicted RBP14.08□□□□□ -0.16
TOM1L1-219ENST00000574744 ABCA8O94911 1581 aa14.08□□□□□ -0.16
TOM1L1-219ENST00000574744 PHLDB1Q86UU1 1377 aa14.08□□□□□ -0.16
TOM1L1-219ENST00000574744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
TOM1L1-219ENST00000574744 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
TOM1L1-219ENST00000574744 PRG4Q92954 1404 aaPredicted RBP14.06□□□□□ -0.16
TOM1L1-219ENST00000574744 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
TOM1L1-219ENST00000574744 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
TOM1L1-219ENST00000574744 MAGI3Q5TCQ9 1506 aa14.04□□□□□ -0.16
TOM1L1-219ENST00000574744 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
TOM1L1-219ENST00000574744 MYOM3Q5VTT5 1437 aa14.03□□□□□ -0.16
TOM1L1-219ENST00000574744 FGD6Q6ZV73 1430 aa14.03□□□□□ -0.16
TOM1L1-219ENST00000574744 CDK13Q14004 1512 aaKnown RBP14.03□□□□□ -0.16
TOM1L1-219ENST00000574744 CDK11AQ9UQ88 783 aaPredicted RBP14.02□□□□□ -0.17
TOM1L1-219ENST00000574744 PLB1Q6P1J6 1458 aa14.01□□□□□ -0.17
TOM1L1-219ENST00000574744 ADCY10Q96PN6 1610 aa14.01□□□□□ -0.17
TOM1L1-219ENST00000574744 PTPRGP23470 1445 aa14□□□□□ -0.17
TOM1L1-219ENST00000574744 MIA2Q96PC5 1412 aa13.99□□□□□ -0.17
TOM1L1-219ENST00000574744 TCOF1Q13428 1488 aaKnown RBP13.99□□□□□ -0.17
TOM1L1-219ENST00000574744 TROQ12816 1431 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms