RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
CTDNEP1-205ENST00000570828 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.08
CTDNEP1-205ENST00000570828 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
CTDNEP1-205ENST00000570828 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
CTDNEP1-205ENST00000570828 CLASP1Q7Z460 1538 aa21.7■■□□□ 1.07
CTDNEP1-205ENST00000570828 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
CTDNEP1-205ENST00000570828 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
CTDNEP1-205ENST00000570828 RNF216Q9NWF9 866 aaPredicted RBP21.65■■□□□ 1.06
CTDNEP1-205ENST00000570828 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
CTDNEP1-205ENST00000570828 GRIN2AQ12879 1464 aa21.6■■□□□ 1.05
CTDNEP1-205ENST00000570828 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
CTDNEP1-205ENST00000570828 FHAD1B1AJZ9 1412 aa21.58■■□□□ 1.05
CTDNEP1-205ENST00000570828 NUP160Q12769 1436 aa21.52■■□□□ 1.04
CTDNEP1-205ENST00000570828 C1QBPQ07021 282 aaKnown RBP21.51■■□□□ 1.03
CTDNEP1-205ENST00000570828 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
CTDNEP1-205ENST00000570828 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
CTDNEP1-205ENST00000570828 TRHP20396 242 aaPredicted RBP21.38■■□□□ 1.01
CTDNEP1-205ENST00000570828 ERCC6L2Q5T890 1561 aa21.36■■□□□ 1.01
CTDNEP1-205ENST00000570828 SHROOM2Q13796 1616 aa21.35■■□□□ 1.01
CTDNEP1-205ENST00000570828 IGF1RP08069 1367 aa21.35■■□□□ 1.01
CTDNEP1-205ENST00000570828 CUL7Q14999 1698 aa21.31■■□□□ 1
CTDNEP1-205ENST00000570828 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
CTDNEP1-205ENST00000570828 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
CTDNEP1-205ENST00000570828 JPH4Q96JJ6 628 aa21.28■■□□□ 1
CTDNEP1-205ENST00000570828 CARMIL1Q5VZK9 1371 aa21.23■□□□□ 0.99
CTDNEP1-205ENST00000570828 KIAA0586Q9BVV6 1533 aa21.22■□□□□ 0.99
CTDNEP1-205ENST00000570828 RAPGEF2Q9Y4G8 1499 aa21.07■□□□□ 0.96
CTDNEP1-205ENST00000570828 IQGAP2Q13576 1575 aa21.05■□□□□ 0.96
CTDNEP1-205ENST00000570828 CARMIL2Q6F5E8 1435 aa21.04■□□□□ 0.96
CTDNEP1-205ENST00000570828 NCBP3Q53F19 620 aaKnown RBP21.03■□□□□ 0.96
CTDNEP1-205ENST00000570828 NPM1P06748 294 aaKnown RBP eCLIP21.02■□□□□ 0.96
CTDNEP1-205ENST00000570828 PTPRGP23470 1445 aa20.99■□□□□ 0.95
CTDNEP1-205ENST00000570828 ADCY10Q96PN6 1610 aa20.99■□□□□ 0.95
CTDNEP1-205ENST00000570828 TNIKQ9UKE5 1360 aa20.98■□□□□ 0.95
CTDNEP1-205ENST00000570828 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
CTDNEP1-205ENST00000570828 MAPKBP1O60336 1514 aa20.95■□□□□ 0.94
CTDNEP1-205ENST00000570828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.93■□□□□ 0.94
CTDNEP1-205ENST00000570828 DISP1Q96F81 1524 aa20.92■□□□□ 0.94
CTDNEP1-205ENST00000570828 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
CTDNEP1-205ENST00000570828 ABCC10Q5T3U5 1492 aa20.9■□□□□ 0.94
CTDNEP1-205ENST00000570828 PRXQ9BXM0 1461 aa20.9■□□□□ 0.94
CTDNEP1-205ENST00000570828 FAM69CQ0P6D2 419 aa20.88■□□□□ 0.93
CTDNEP1-205ENST00000570828 ABCC2Q92887 1545 aa20.86■□□□□ 0.93
CTDNEP1-205ENST00000570828 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
CTDNEP1-205ENST00000570828 KIAA0556O60303 1618 aa20.85■□□□□ 0.93
CTDNEP1-205ENST00000570828 UACAQ9BZF9 1416 aa20.84■□□□□ 0.93
CTDNEP1-205ENST00000570828 DIP2BQ9P265 1576 aa20.84■□□□□ 0.93
CTDNEP1-205ENST00000570828 UHRF1BP1LA0JNW5 1464 aa20.83■□□□□ 0.93
CTDNEP1-205ENST00000570828 CTTNBP2Q8WZ74 1663 aa20.83■□□□□ 0.92
CTDNEP1-205ENST00000570828 GOLGA3Q08378 1498 aa20.8■□□□□ 0.92
CTDNEP1-205ENST00000570828 CSRNP3Q8WYN3 585 aa20.78■□□□□ 0.92
CTDNEP1-205ENST00000570828 EEA1Q15075 1411 aa20.78■□□□□ 0.92
CTDNEP1-205ENST00000570828 ASXL2Q76L83 1435 aa20.76■□□□□ 0.91
CTDNEP1-205ENST00000570828 PLB1Q6P1J6 1458 aa20.75■□□□□ 0.91
CTDNEP1-205ENST00000570828 KDM5BQ9UGL1 1544 aa20.73■□□□□ 0.91
CTDNEP1-205ENST00000570828 FAM9AQ8IZU1 332 aaPredicted RBP20.66■□□□□ 0.9
CTDNEP1-205ENST00000570828 ZCCHC11Q5TAX3 1644 aaKnown RBP20.66■□□□□ 0.9
CTDNEP1-205ENST00000570828 GLI2P10070 1586 aa20.65■□□□□ 0.9
CTDNEP1-205ENST00000570828 NPM3O75607 178 aaKnown RBP20.65■□□□□ 0.9
CTDNEP1-205ENST00000570828 ABCA8O94911 1581 aa20.63■□□□□ 0.89
CTDNEP1-205ENST00000570828 EPRSP07814 1512 aaKnown RBP20.63■□□□□ 0.89
CTDNEP1-205ENST00000570828 KDM6BO15054 1643 aa20.62■□□□□ 0.89
CTDNEP1-205ENST00000570828 WDR7Q9Y4E6 1490 aa20.61■□□□□ 0.89
CTDNEP1-205ENST00000570828 TSPOAP1O95153 1857 aa20.6■□□□□ 0.89
CTDNEP1-205ENST00000570828 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
CTDNEP1-205ENST00000570828 SAMD9Q5K651 1589 aa20.58■□□□□ 0.88
CTDNEP1-205ENST00000570828 KIF21BO75037 1637 aa20.56■□□□□ 0.88
CTDNEP1-205ENST00000570828 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
CTDNEP1-205ENST00000570828 MAP3K4Q9Y6R4 1608 aa20.53■□□□□ 0.88
CTDNEP1-205ENST00000570828 TEX14Q8IWB6 1497 aa20.52■□□□□ 0.88
CTDNEP1-205ENST00000570828 PPRC1Q5VV67 1664 aaKnown RBP20.51■□□□□ 0.87
CTDNEP1-205ENST00000570828 ARID3CA6NKF2 412 aa20.5■□□□□ 0.87
CTDNEP1-205ENST00000570828 KCNH8Q96L42 1107 aa20.48■□□□□ 0.87
CTDNEP1-205ENST00000570828 FHOD3Q2V2M9 1422 aa20.47■□□□□ 0.87
CTDNEP1-205ENST00000570828 ATP10BO94823 1461 aa20.46■□□□□ 0.87
CTDNEP1-205ENST00000570828 EFCAB5A4FU69 1503 aa20.46■□□□□ 0.87
CTDNEP1-205ENST00000570828 RAPGEF6Q8TEU7 1601 aa20.45■□□□□ 0.87
CTDNEP1-205ENST00000570828 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
CTDNEP1-205ENST00000570828 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
CTDNEP1-205ENST00000570828 UBTFP17480 764 aaKnown RBP20.42■□□□□ 0.86
CTDNEP1-205ENST00000570828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.41■□□□□ 0.86
CTDNEP1-205ENST00000570828 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
CTDNEP1-205ENST00000570828 MAGI3Q5TCQ9 1506 aa20.41■□□□□ 0.86
CTDNEP1-205ENST00000570828 CFAP43Q8NDM7 1665 aa20.41■□□□□ 0.86
CTDNEP1-205ENST00000570828 NUP153P49790 1475 aaKnown RBP20.4■□□□□ 0.86
CTDNEP1-205ENST00000570828 COL17A1Q9UMD9 1497 aaPredicted RBP20.4■□□□□ 0.86
CTDNEP1-205ENST00000570828 U3KPZ7 1027 aaPredicted RBP20.38■□□□□ 0.85
CTDNEP1-205ENST00000570828 ABCA9Q8IUA7 1624 aa20.31■□□□□ 0.84
CTDNEP1-205ENST00000570828 KDM4FA0A1W2PPD8 638 aa20.28■□□□□ 0.84
CTDNEP1-205ENST00000570828 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
CTDNEP1-205ENST00000570828 FMN1Q68DA7 1419 aa20.27■□□□□ 0.84
CTDNEP1-205ENST00000570828 PLEKHD1A6NEE1 506 aa20.27■□□□□ 0.84
CTDNEP1-205ENST00000570828 CAPN15O75808 1086 aa20.27■□□□□ 0.84
CTDNEP1-205ENST00000570828 DSG3P32926 999 aa20.26■□□□□ 0.83
CTDNEP1-205ENST00000570828 PHLDB1Q86UU1 1377 aa20.24■□□□□ 0.83
CTDNEP1-205ENST00000570828 ARAP3Q8WWN8 1544 aa20.24■□□□□ 0.83
CTDNEP1-205ENST00000570828 SPINK5Q9NQ38 1064 aaPredicted RBP20.23■□□□□ 0.83
CTDNEP1-205ENST00000570828 ADGRL1O94910 1474 aa20.22■□□□□ 0.83
CTDNEP1-205ENST00000570828 NEO1Q92859 1461 aa20.22■□□□□ 0.83
CTDNEP1-205ENST00000570828 CDK13Q14004 1512 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms