RNA–Protein interactions for RNA: ENST00000570242.1

ITGAM-208, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-208ENST00000570242 WIZO95785 1651 aa17.2■□□□□ 0.34
ITGAM-208ENST00000570242 PRKAR2AP13861 404 aaKnown RBP17.19■□□□□ 0.34
ITGAM-208ENST00000570242 CHADLQ6NUI6 762 aa17.18■□□□□ 0.34
ITGAM-208ENST00000570242 MIER1Q8N108 512 aa17.18■□□□□ 0.34
ITGAM-208ENST00000570242 CUX2O14529 1486 aa17.16■□□□□ 0.34
ITGAM-208ENST00000570242 PLCD3Q8N3E9 789 aa17.15■□□□□ 0.34
ITGAM-208ENST00000570242 CREBZFQ9NS37 354 aa17.15■□□□□ 0.34
ITGAM-208ENST00000570242 VASPP50552 380 aaPredicted RBP17.14■□□□□ 0.33
ITGAM-208ENST00000570242 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.33
ITGAM-208ENST00000570242 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
ITGAM-208ENST00000570242 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
ITGAM-208ENST00000570242 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
ITGAM-208ENST00000570242 POTEHQ6S545 545 aa17.06■□□□□ 0.32
ITGAM-208ENST00000570242 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
ITGAM-208ENST00000570242 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
ITGAM-208ENST00000570242 TOP2AP11388 1531 aaKnown RBP17■□□□□ 0.31
ITGAM-208ENST00000570242 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
ITGAM-208ENST00000570242 FARP1Q9Y4F1 1045 aaPredicted RBP16.98■□□□□ 0.31
ITGAM-208ENST00000570242 ZBTB47Q9UFB7 747 aaPredicted RBP16.95■□□□□ 0.3
ITGAM-208ENST00000570242 KLHL34Q8N239 644 aa16.94■□□□□ 0.3
ITGAM-208ENST00000570242 MNX1P50219 401 aaPredicted RBP16.93■□□□□ 0.3
ITGAM-208ENST00000570242 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
ITGAM-208ENST00000570242 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
ITGAM-208ENST00000570242 IFNLR1Q8IU57 520 aaPredicted RBP16.9■□□□□ 0.3
ITGAM-208ENST00000570242 CFTRP13569 1480 aa16.88■□□□□ 0.29
ITGAM-208ENST00000570242 MRC2Q9UBG0 1479 aa16.87■□□□□ 0.29
ITGAM-208ENST00000570242 WDR62O43379 1518 aa16.86■□□□□ 0.29
ITGAM-208ENST00000570242 FANCD2Q9BXW9 1451 aa16.83■□□□□ 0.28
ITGAM-208ENST00000570242 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.28
ITGAM-208ENST00000570242 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
ITGAM-208ENST00000570242 HAX1O00165 279 aa16.77■□□□□ 0.28
ITGAM-208ENST00000570242 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
ITGAM-208ENST00000570242 SPOCK2Q92563 424 aa16.73■□□□□ 0.27
ITGAM-208ENST00000570242 URB2Q14146 1524 aaKnown RBP16.71■□□□□ 0.27
ITGAM-208ENST00000570242 C19orf67A6NJJ6 358 aa16.7■□□□□ 0.26
ITGAM-208ENST00000570242 CD44P16070 742 aaKnown RBP16.69■□□□□ 0.26
ITGAM-208ENST00000570242 NUBP1P53384 320 aa16.69■□□□□ 0.26
ITGAM-208ENST00000570242 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
ITGAM-208ENST00000570242 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
ITGAM-208ENST00000570242 TSPYL2Q9H2G4 693 aaPredicted RBP16.63■□□□□ 0.25
ITGAM-208ENST00000570242 FAM212AQ96EL1 285 aa16.6■□□□□ 0.25
ITGAM-208ENST00000570242 DCAF8Q5TAQ9 597 aa16.59■□□□□ 0.25
ITGAM-208ENST00000570242 ZRANB1Q9UGI0 708 aa16.59■□□□□ 0.25
ITGAM-208ENST00000570242 EVX2Q03828 476 aa16.57■□□□□ 0.24
ITGAM-208ENST00000570242 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
ITGAM-208ENST00000570242 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
ITGAM-208ENST00000570242 GSE1Q14687 1217 aa16.52■□□□□ 0.24
ITGAM-208ENST00000570242 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
ITGAM-208ENST00000570242 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
ITGAM-208ENST00000570242 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
ITGAM-208ENST00000570242 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
ITGAM-208ENST00000570242 CCDC61Q9Y6R9 512 aa16.46■□□□□ 0.23
ITGAM-208ENST00000570242 ZNF579Q8NAF0 562 aaKnown RBP16.44■□□□□ 0.22
ITGAM-208ENST00000570242 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
ITGAM-208ENST00000570242 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
ITGAM-208ENST00000570242 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
ITGAM-208ENST00000570242 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
ITGAM-208ENST00000570242 SUPT5HO00267 1087 aaKnown RBP16.38■□□□□ 0.21
ITGAM-208ENST00000570242 SP7Q8TDD2 431 aaPredicted RBP16.37■□□□□ 0.21
ITGAM-208ENST00000570242 PYGBP11216 843 aa16.36■□□□□ 0.21
ITGAM-208ENST00000570242 CUX1P39880 1505 aa16.34■□□□□ 0.21
ITGAM-208ENST00000570242 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
ITGAM-208ENST00000570242 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.2
ITGAM-208ENST00000570242 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
ITGAM-208ENST00000570242 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
ITGAM-208ENST00000570242 KIF12Q96FN5 646 aa16.31■□□□□ 0.2
ITGAM-208ENST00000570242 CLCN6P51797 869 aa16.3■□□□□ 0.2
ITGAM-208ENST00000570242 MAP3K13O43283 966 aa16.28■□□□□ 0.2
ITGAM-208ENST00000570242 PKD2Q13563 968 aa16.28■□□□□ 0.2
ITGAM-208ENST00000570242 SOGA1O94964 1423 aa16.28■□□□□ 0.2
ITGAM-208ENST00000570242 GABBR2O75899 941 aa16.27■□□□□ 0.2
ITGAM-208ENST00000570242 ECM2O94769 699 aaPredicted RBP16.26■□□□□ 0.19
ITGAM-208ENST00000570242 CHRM1P11229 460 aaPredicted RBP16.26■□□□□ 0.19
ITGAM-208ENST00000570242 CHD1O14646 1710 aa16.25■□□□□ 0.19
ITGAM-208ENST00000570242 AMER1Q5JTC6 1135 aaPredicted RBP16.25■□□□□ 0.19
ITGAM-208ENST00000570242 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
ITGAM-208ENST00000570242 PCDHB13Q9Y5F0 798 aa16.24■□□□□ 0.19
ITGAM-208ENST00000570242 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
ITGAM-208ENST00000570242 MS4A3Q96HJ5 214 aa16.21■□□□□ 0.19
ITGAM-208ENST00000570242 SGIP1Q9BQI5 828 aa16.21■□□□□ 0.19
ITGAM-208ENST00000570242 GALR2O43603 387 aaPredicted RBP16.2■□□□□ 0.18
ITGAM-208ENST00000570242 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
ITGAM-208ENST00000570242 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
ITGAM-208ENST00000570242 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
ITGAM-208ENST00000570242 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
ITGAM-208ENST00000570242 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
ITGAM-208ENST00000570242 ARHGEF11O15085 1522 aa16.15■□□□□ 0.18
ITGAM-208ENST00000570242 IFNL1Q8IU54 200 aa16.15■□□□□ 0.18
ITGAM-208ENST00000570242 ZNF467Q7Z7K2 595 aaPredicted RBP16.14■□□□□ 0.17
ITGAM-208ENST00000570242 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
ITGAM-208ENST00000570242 ABCA10Q8WWZ4 1543 aa16.14■□□□□ 0.17
ITGAM-208ENST00000570242 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
ITGAM-208ENST00000570242 BIVM-ERCC5R4GMW8 1640 aa16.13■□□□□ 0.17
ITGAM-208ENST00000570242 PCDHB8Q9UN66 801 aa16.13■□□□□ 0.17
ITGAM-208ENST00000570242 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
ITGAM-208ENST00000570242 PBRM1Q86U86 1689 aa16.13■□□□□ 0.17
ITGAM-208ENST00000570242 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
ITGAM-208ENST00000570242 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
ITGAM-208ENST00000570242 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
ITGAM-208ENST00000570242 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms