RNA–Protein interactions for RNA: ENST00000570242.1

ITGAM-208, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-208ENST00000570242 AEBP2Q6ZN18 517 aaPredicted RBP32.23■■■□□ 2.75
ITGAM-208ENST00000570242 CHIC1Q5VXU3 224 aa31.41■■■□□ 2.62
ITGAM-208ENST00000570242 PHF23Q9BUL5 403 aaPredicted RBP27.6■■■□□ 2.01
ITGAM-208ENST00000570242 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
ITGAM-208ENST00000570242 PLPPR3Q6T4P5 718 aa25.5■■□□□ 1.67
ITGAM-208ENST00000570242 FOXD1Q16676 465 aa25.42■■□□□ 1.66
ITGAM-208ENST00000570242 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
ITGAM-208ENST00000570242 ADRA2BP18089 450 aa24.38■■□□□ 1.49
ITGAM-208ENST00000570242 PIAS4Q8N2W9 510 aaPredicted RBP23.99■■□□□ 1.43
ITGAM-208ENST00000570242 MSH5O43196 834 aa23.5■■□□□ 1.35
ITGAM-208ENST00000570242 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
ITGAM-208ENST00000570242 PPP4R3CPQ6ZMV5 832 aa22.45■■□□□ 1.18
ITGAM-208ENST00000570242 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
ITGAM-208ENST00000570242 MAPK8IP2Q13387 824 aaPredicted RBP22.15■■□□□ 1.14
ITGAM-208ENST00000570242 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
ITGAM-208ENST00000570242 CNKSR2Q8WXI2 1034 aa21.85■■□□□ 1.09
ITGAM-208ENST00000570242 DMRT2Q9Y5R5 561 aa21.83■■□□□ 1.09
ITGAM-208ENST00000570242 KCNA4P22459 653 aa21.82■■□□□ 1.08
ITGAM-208ENST00000570242 POTEDQ86YR6 584 aa21.54■■□□□ 1.04
ITGAM-208ENST00000570242 NPM3O75607 178 aaKnown RBP21.5■■□□□ 1.03
ITGAM-208ENST00000570242 RNF216Q9NWF9 866 aaPredicted RBP21.42■■□□□ 1.02
ITGAM-208ENST00000570242 HOXD11P31277 338 aaPredicted RBP21.35■■□□□ 1.01
ITGAM-208ENST00000570242 DCAF8L1A6NGE4 600 aa20.99■□□□□ 0.95
ITGAM-208ENST00000570242 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
ITGAM-208ENST00000570242 SLC4A1APQ9BWU0 796 aaKnown RBP20.79■□□□□ 0.92
ITGAM-208ENST00000570242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.86
ITGAM-208ENST00000570242 SLC4A2P04920 1241 aa20.31■□□□□ 0.84
ITGAM-208ENST00000570242 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
ITGAM-208ENST00000570242 FOXD4L1Q9NU39 408 aa20.12■□□□□ 0.81
ITGAM-208ENST00000570242 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
ITGAM-208ENST00000570242 RNF39Q9H2S5 420 aa20.1■□□□□ 0.81
ITGAM-208ENST00000570242 ZBTB22O15209 634 aa20.04■□□□□ 0.8
ITGAM-208ENST00000570242 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.8
ITGAM-208ENST00000570242 ABCC9O60706 1549 aa19.99■□□□□ 0.79
ITGAM-208ENST00000570242 MYCNP04198 464 aaPredicted RBP19.89■□□□□ 0.77
ITGAM-208ENST00000570242 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
ITGAM-208ENST00000570242 C1QBPQ07021 282 aaKnown RBP19.87■□□□□ 0.77
ITGAM-208ENST00000570242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
ITGAM-208ENST00000570242 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
ITGAM-208ENST00000570242 CACNB1Q02641 598 aaPredicted RBP19.71■□□□□ 0.75
ITGAM-208ENST00000570242 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
ITGAM-208ENST00000570242 APLP2Q06481 763 aa19.6■□□□□ 0.73
ITGAM-208ENST00000570242 SPINK5Q9NQ38 1064 aaPredicted RBP19.5■□□□□ 0.71
ITGAM-208ENST00000570242 CAPN15O75808 1086 aa19.47■□□□□ 0.71
ITGAM-208ENST00000570242 ATXN8OSP0DMR3 200 aa19.41■□□□□ 0.7
ITGAM-208ENST00000570242 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
ITGAM-208ENST00000570242 ATF5Q9Y2D1 282 aaPredicted RBP19.34■□□□□ 0.69
ITGAM-208ENST00000570242 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
ITGAM-208ENST00000570242 DSG3P32926 999 aa19.11■□□□□ 0.65
ITGAM-208ENST00000570242 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
ITGAM-208ENST00000570242 ABCB7O75027 752 aa19.08■□□□□ 0.64
ITGAM-208ENST00000570242 NACADO15069 1562 aa19.02■□□□□ 0.63
ITGAM-208ENST00000570242 POLA2Q14181 598 aa19■□□□□ 0.63
ITGAM-208ENST00000570242 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
ITGAM-208ENST00000570242 MYO15BQ96JP2 1530 aa18.83■□□□□ 0.6
ITGAM-208ENST00000570242 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.59
ITGAM-208ENST00000570242 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
ITGAM-208ENST00000570242 ZBTB12Q9Y330 459 aaPredicted RBP18.67■□□□□ 0.58
ITGAM-208ENST00000570242 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
ITGAM-208ENST00000570242 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
ITGAM-208ENST00000570242 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
ITGAM-208ENST00000570242 FBLN2P98095 1184 aa18.59■□□□□ 0.57
ITGAM-208ENST00000570242 MKRN4PQ13434 485 aaPredicted RBP18.48■□□□□ 0.55
ITGAM-208ENST00000570242 SCRIBQ14160 1630 aa18.41■□□□□ 0.54
ITGAM-208ENST00000570242 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
ITGAM-208ENST00000570242 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
ITGAM-208ENST00000570242 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
ITGAM-208ENST00000570242 SPDYE2BA6NHP3 402 aa18.16■□□□□ 0.5
ITGAM-208ENST00000570242 SPDYE6P0CI01 402 aa18.16■□□□□ 0.5
ITGAM-208ENST00000570242 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
ITGAM-208ENST00000570242 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
ITGAM-208ENST00000570242 ZNF692Q9BU19 519 aaPredicted RBP18.1■□□□□ 0.49
ITGAM-208ENST00000570242 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
ITGAM-208ENST00000570242 SPDYE4A6NLX3 237 aa18.07■□□□□ 0.48
ITGAM-208ENST00000570242 FKBP8Q14318 412 aa18.02■□□□□ 0.48
ITGAM-208ENST00000570242 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
ITGAM-208ENST00000570242 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
ITGAM-208ENST00000570242 SSUH2Q9Y2M2 353 aa17.97■□□□□ 0.47
ITGAM-208ENST00000570242 REM2Q8IYK8 340 aaPredicted RBP17.81■□□□□ 0.44
ITGAM-208ENST00000570242 PROM2Q8N271 834 aa17.69■□□□□ 0.42
ITGAM-208ENST00000570242 SPDYE1Q8NFV5 336 aaPredicted RBP17.65■□□□□ 0.42
ITGAM-208ENST00000570242 CLEC11AQ9Y240 323 aa17.62■□□□□ 0.41
ITGAM-208ENST00000570242 PITPNM1O00562 1244 aa17.6■□□□□ 0.41
ITGAM-208ENST00000570242 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
ITGAM-208ENST00000570242 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
ITGAM-208ENST00000570242 STAG3Q9UJ98 1225 aa17.54■□□□□ 0.4
ITGAM-208ENST00000570242 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
ITGAM-208ENST00000570242 CHRDL2Q6WN34 429 aa17.51■□□□□ 0.39
ITGAM-208ENST00000570242 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
ITGAM-208ENST00000570242 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
ITGAM-208ENST00000570242 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
ITGAM-208ENST00000570242 PRR29P0C7W0 189 aa17.44■□□□□ 0.38
ITGAM-208ENST00000570242 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
ITGAM-208ENST00000570242 FBXO3Q9UK99 471 aa17.41■□□□□ 0.38
ITGAM-208ENST00000570242 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
ITGAM-208ENST00000570242 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
ITGAM-208ENST00000570242 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
ITGAM-208ENST00000570242 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
ITGAM-208ENST00000570242 NESP48681 1621 aa17.25■□□□□ 0.35
ITGAM-208ENST00000570242 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms