RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 CYB5RLQ6IPT4 315 aa11.47□□□□□ -0.57
CDH13-212ENST00000569144 IFT140Q96RY7 1462 aa11.46□□□□□ -0.57
CDH13-212ENST00000569144 SPDYE2BA6NHP3 402 aa11.46□□□□□ -0.57
CDH13-212ENST00000569144 SPDYE6P0CI01 402 aa11.46□□□□□ -0.57
CDH13-212ENST00000569144 SPDYE2Q495Y8 402 aa11.46□□□□□ -0.57
CDH13-212ENST00000569144 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
CDH13-212ENST00000569144 SPDYE4A6NLX3 237 aa11.44□□□□□ -0.58
CDH13-212ENST00000569144 FKBP8Q14318 412 aa11.43□□□□□ -0.58
CDH13-212ENST00000569144 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
CDH13-212ENST00000569144 ARAP1Q96P48 1450 aa11.42□□□□□ -0.58
CDH13-212ENST00000569144 RSF1Q96T23 1441 aaPredicted RBP11.38□□□□□ -0.59
CDH13-212ENST00000569144 TOP2AP11388 1531 aaKnown RBP11.38□□□□□ -0.59
CDH13-212ENST00000569144 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
CDH13-212ENST00000569144 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
CDH13-212ENST00000569144 TOPBP1Q92547 1522 aa11.35□□□□□ -0.59
CDH13-212ENST00000569144 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
CDH13-212ENST00000569144 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
CDH13-212ENST00000569144 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
CDH13-212ENST00000569144 CHD1O14646 1710 aa11.32□□□□□ -0.6
CDH13-212ENST00000569144 AQRO60306 1485 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDH13-212ENST00000569144 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
CDH13-212ENST00000569144 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.61
CDH13-212ENST00000569144 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
CDH13-212ENST00000569144 CCDC88BA6NC98 1476 aa11.24□□□□□ -0.61
CDH13-212ENST00000569144 CLASP1Q7Z460 1538 aa11.24□□□□□ -0.61
CDH13-212ENST00000569144 POLA1P09884 1462 aaPredicted RBP11.21□□□□□ -0.61
CDH13-212ENST00000569144 PROM2Q8N271 834 aa11.21□□□□□ -0.61
CDH13-212ENST00000569144 SYNJ1O43426 1573 aa11.19□□□□□ -0.62
CDH13-212ENST00000569144 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
CDH13-212ENST00000569144 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
CDH13-212ENST00000569144 RAD54L2Q9Y4B4 1467 aa11.17□□□□□ -0.62
CDH13-212ENST00000569144 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
CDH13-212ENST00000569144 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
CDH13-212ENST00000569144 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
CDH13-212ENST00000569144 SOGA1O94964 1423 aa11.15□□□□□ -0.62
CDH13-212ENST00000569144 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
CDH13-212ENST00000569144 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
CDH13-212ENST00000569144 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
CDH13-212ENST00000569144 CLEC11AQ9Y240 323 aa11.12□□□□□ -0.63
CDH13-212ENST00000569144 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
CDH13-212ENST00000569144 GRIN2BQ13224 1484 aa11.11□□□□□ -0.63
CDH13-212ENST00000569144 FGD5Q6ZNL6 1462 aa11.08□□□□□ -0.64
CDH13-212ENST00000569144 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
CDH13-212ENST00000569144 CHRDL2Q6WN34 429 aa11.03□□□□□ -0.64
CDH13-212ENST00000569144 CUX1P39880 1505 aa11.01□□□□□ -0.65
CDH13-212ENST00000569144 FBXO3Q9UK99 471 aa11.01□□□□□ -0.65
CDH13-212ENST00000569144 ERCC6L2Q5T890 1561 aa11.01□□□□□ -0.65
CDH13-212ENST00000569144 PRR29P0C7W0 189 aa11□□□□□ -0.65
CDH13-212ENST00000569144 PBRM1Q86U86 1689 aa11□□□□□ -0.65
CDH13-212ENST00000569144 ILDR1Q86SU0 546 aaPredicted RBP10.97□□□□□ -0.65
CDH13-212ENST00000569144 CEP170Q5SW79 1584 aa10.97□□□□□ -0.65
CDH13-212ENST00000569144 GRIN2AQ12879 1464 aa10.96□□□□□ -0.65
CDH13-212ENST00000569144 KIF13AQ9H1H9 1805 aa10.95□□□□□ -0.66
CDH13-212ENST00000569144 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
CDH13-212ENST00000569144 ABCA10Q8WWZ4 1543 aa10.95□□□□□ -0.66
CDH13-212ENST00000569144 NUP160Q12769 1436 aa10.95□□□□□ -0.66
CDH13-212ENST00000569144 SHROOM2Q13796 1616 aa10.93□□□□□ -0.66
CDH13-212ENST00000569144 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
CDH13-212ENST00000569144 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDH13-212ENST00000569144 ADAMTS12P58397 1594 aa10.9□□□□□ -0.66
CDH13-212ENST00000569144 ABCC10Q5T3U5 1492 aa10.9□□□□□ -0.66
CDH13-212ENST00000569144 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
CDH13-212ENST00000569144 FAM69CQ0P6D2 419 aa10.89□□□□□ -0.67
CDH13-212ENST00000569144 FHAD1B1AJZ9 1412 aa10.87□□□□□ -0.67
CDH13-212ENST00000569144 VASPP50552 380 aaPredicted RBP10.87□□□□□ -0.67
CDH13-212ENST00000569144 MAPKBP1O60336 1514 aa10.86□□□□□ -0.67
CDH13-212ENST00000569144 MIER1Q8N108 512 aa10.86□□□□□ -0.67
CDH13-212ENST00000569144 DIP2BQ9P265 1576 aa10.86□□□□□ -0.67
CDH13-212ENST00000569144 PRG4Q92954 1404 aaPredicted RBP10.85□□□□□ -0.67
CDH13-212ENST00000569144 KDM6BO15054 1643 aa10.85□□□□□ -0.67
CDH13-212ENST00000569144 PRKAR2AP13861 404 aaKnown RBP10.85□□□□□ -0.67
CDH13-212ENST00000569144 CHADLQ6NUI6 762 aa10.85□□□□□ -0.67
CDH13-212ENST00000569144 CREBZFQ9NS37 354 aa10.85□□□□□ -0.67
CDH13-212ENST00000569144 NPM1P06748 294 aaKnown RBP eCLIP10.84□□□□□ -0.67
CDH13-212ENST00000569144 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
CDH13-212ENST00000569144 WRNQ14191 1432 aaPredicted RBP eCLIP10.83□□□□□ -0.68
CDH13-212ENST00000569144 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
CDH13-212ENST00000569144 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
CDH13-212ENST00000569144 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
CDH13-212ENST00000569144 ADCY10Q96PN6 1610 aa10.78□□□□□ -0.68
CDH13-212ENST00000569144 RUSC2Q8N2Y8 1516 aa10.76□□□□□ -0.69
CDH13-212ENST00000569144 ADGRL1O94910 1474 aa10.74□□□□□ -0.69
CDH13-212ENST00000569144 POTEHQ6S545 545 aa10.74□□□□□ -0.69
CDH13-212ENST00000569144 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
CDH13-212ENST00000569144 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
CDH13-212ENST00000569144 IFNLR1Q8IU57 520 aaPredicted RBP10.72□□□□□ -0.69
CDH13-212ENST00000569144 KLHL34Q8N239 644 aa10.72□□□□□ -0.69
CDH13-212ENST00000569144 FARP1Q9Y4F1 1045 aaPredicted RBP10.72□□□□□ -0.69
CDH13-212ENST00000569144 TSPOAP1O95153 1857 aa10.72□□□□□ -0.69
CDH13-212ENST00000569144 MNX1P50219 401 aaPredicted RBP10.71□□□□□ -0.69
CDH13-212ENST00000569144 HECW2Q9P2P5 1572 aa10.71□□□□□ -0.69
CDH13-212ENST00000569144 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
CDH13-212ENST00000569144 GLI2P10070 1586 aa10.67□□□□□ -0.7
CDH13-212ENST00000569144 KIAA0586Q9BVV6 1533 aa10.67□□□□□ -0.7
CDH13-212ENST00000569144 PPRC1Q5VV67 1664 aaKnown RBP10.66□□□□□ -0.7
CDH13-212ENST00000569144 PLB1Q6P1J6 1458 aa10.65□□□□□ -0.7
CDH13-212ENST00000569144 ABCC2Q92887 1545 aa10.64□□□□□ -0.71
CDH13-212ENST00000569144 PTPRGP23470 1445 aa10.64□□□□□ -0.71
CDH13-212ENST00000569144 ASXL2Q76L83 1435 aa10.64□□□□□ -0.71
CDH13-212ENST00000569144 COL17A1Q9UMD9 1497 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms