RNA–Protein interactions for RNA: ENST00000568365.1

SIRPB1-213, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SIRPB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-213ENST00000568365 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.18
SIRPB1-213ENST00000568365 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.18
SIRPB1-213ENST00000568365 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.18
SIRPB1-213ENST00000568365 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.18
SIRPB1-213ENST00000568365 ILDR1Q86SU0 546 aaPredicted RBP13.89□□□□□ -0.19
SIRPB1-213ENST00000568365 CLIP1P30622 1438 aa13.89□□□□□ -0.19
SIRPB1-213ENST00000568365 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
SIRPB1-213ENST00000568365 PBRM1Q86U86 1689 aa13.86□□□□□ -0.19
SIRPB1-213ENST00000568365 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
SIRPB1-213ENST00000568365 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
SIRPB1-213ENST00000568365 MIER1Q8N108 512 aa13.84□□□□□ -0.19
SIRPB1-213ENST00000568365 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
SIRPB1-213ENST00000568365 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
SIRPB1-213ENST00000568365 APLP2Q06481 763 aa13.83□□□□□ -0.2
SIRPB1-213ENST00000568365 SNAPC4Q5SXM2 1469 aa13.82□□□□□ -0.2
SIRPB1-213ENST00000568365 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
SIRPB1-213ENST00000568365 CHD1O14646 1710 aa13.78□□□□□ -0.2
SIRPB1-213ENST00000568365 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
SIRPB1-213ENST00000568365 MAGI1Q96QZ7 1491 aaPredicted RBP13.77□□□□□ -0.2
SIRPB1-213ENST00000568365 KIF27Q86VH2 1401 aa13.76□□□□□ -0.21
SIRPB1-213ENST00000568365 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
SIRPB1-213ENST00000568365 ADAMTS12P58397 1594 aa13.74□□□□□ -0.21
SIRPB1-213ENST00000568365 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
SIRPB1-213ENST00000568365 SYNJ2O15056 1496 aa13.73□□□□□ -0.21
SIRPB1-213ENST00000568365 FBLN2P98095 1184 aa13.73□□□□□ -0.21
SIRPB1-213ENST00000568365 ARHGEF11O15085 1522 aa13.72□□□□□ -0.21
SIRPB1-213ENST00000568365 CHMP7Q8WUX9 453 aaPredicted RBP13.7□□□□□ -0.22
SIRPB1-213ENST00000568365 IGF1RP08069 1367 aa13.69□□□□□ -0.22
SIRPB1-213ENST00000568365 FHAD1B1AJZ9 1412 aa13.69□□□□□ -0.22
SIRPB1-213ENST00000568365 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
SIRPB1-213ENST00000568365 CUL7Q14999 1698 aa13.67□□□□□ -0.22
SIRPB1-213ENST00000568365 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
SIRPB1-213ENST00000568365 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
SIRPB1-213ENST00000568365 CYB5RLQ6IPT4 315 aa13.64□□□□□ -0.23
SIRPB1-213ENST00000568365 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
SIRPB1-213ENST00000568365 PRXQ9BXM0 1461 aa13.63□□□□□ -0.23
SIRPB1-213ENST00000568365 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
SIRPB1-213ENST00000568365 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
SIRPB1-213ENST00000568365 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
SIRPB1-213ENST00000568365 NUP160Q12769 1436 aa13.6□□□□□ -0.23
SIRPB1-213ENST00000568365 SUPT16HQ9Y5B9 1047 aaKnown RBP13.58□□□□□ -0.24
SIRPB1-213ENST00000568365 CCNB3Q8WWL7 1395 aa13.51□□□□□ -0.25
SIRPB1-213ENST00000568365 RANGAP1P46060 587 aaPredicted RBP13.5□□□□□ -0.25
SIRPB1-213ENST00000568365 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
SIRPB1-213ENST00000568365 MAP3K1Q13233 1512 aa13.5□□□□□ -0.25
SIRPB1-213ENST00000568365 KIAA0586Q9BVV6 1533 aa13.49□□□□□ -0.25
SIRPB1-213ENST00000568365 KANK4Q5T7N3 995 aaPredicted RBP13.48□□□□□ -0.25
SIRPB1-213ENST00000568365 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
SIRPB1-213ENST00000568365 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
SIRPB1-213ENST00000568365 CTTNBP2Q8WZ74 1663 aa13.46□□□□□ -0.26
SIRPB1-213ENST00000568365 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
SIRPB1-213ENST00000568365 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
SIRPB1-213ENST00000568365 JPH4Q96JJ6 628 aa13.44□□□□□ -0.26
SIRPB1-213ENST00000568365 MAPKBP1O60336 1514 aa13.43□□□□□ -0.26
SIRPB1-213ENST00000568365 PRG4Q92954 1404 aaPredicted RBP13.42□□□□□ -0.26
SIRPB1-213ENST00000568365 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
SIRPB1-213ENST00000568365 CFAP43Q8NDM7 1665 aa13.41□□□□□ -0.26
SIRPB1-213ENST00000568365 RAB3GAP2Q9H2M9 1393 aa13.41□□□□□ -0.26
SIRPB1-213ENST00000568365 SETD5Q9C0A6 1442 aa13.39□□□□□ -0.27
SIRPB1-213ENST00000568365 ANP32EQ9BTT0 268 aa13.39□□□□□ -0.27
SIRPB1-213ENST00000568365 UGGT2Q9NYU1 1516 aa13.37□□□□□ -0.27
SIRPB1-213ENST00000568365 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
SIRPB1-213ENST00000568365 DISP1Q96F81 1524 aa13.35□□□□□ -0.27
SIRPB1-213ENST00000568365 LRRC9Q6ZRR7 1453 aa13.35□□□□□ -0.27
SIRPB1-213ENST00000568365 KIAA0556O60303 1618 aa13.33□□□□□ -0.28
SIRPB1-213ENST00000568365 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
SIRPB1-213ENST00000568365 ITGAEP38570 1179 aa13.3□□□□□ -0.28
SIRPB1-213ENST00000568365 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
SIRPB1-213ENST00000568365 NEFLP07196 543 aa13.3□□□□□ -0.28
SIRPB1-213ENST00000568365 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
SIRPB1-213ENST00000568365 PCF11O94913 1555 aaKnown RBP13.28□□□□□ -0.28
SIRPB1-213ENST00000568365 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.27□□□□□ -0.29
SIRPB1-213ENST00000568365 FKBP8Q14318 412 aa13.26□□□□□ -0.29
SIRPB1-213ENST00000568365 PTPRGP23470 1445 aa13.26□□□□□ -0.29
SIRPB1-213ENST00000568365 PHLDB1Q86UU1 1377 aa13.26□□□□□ -0.29
SIRPB1-213ENST00000568365 PPP1R15AO75807 674 aaPredicted RBP13.25□□□□□ -0.29
SIRPB1-213ENST00000568365 DDX10Q13206 875 aaKnown RBP13.25□□□□□ -0.29
SIRPB1-213ENST00000568365 P3H3Q8IVL6 736 aa13.25□□□□□ -0.29
SIRPB1-213ENST00000568365 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
SIRPB1-213ENST00000568365 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
SIRPB1-213ENST00000568365 FYCO1Q9BQS8 1478 aa13.23□□□□□ -0.29
SIRPB1-213ENST00000568365 ANP32CO43423 234 aa13.23□□□□□ -0.29
SIRPB1-213ENST00000568365 ADCY10Q96PN6 1610 aa13.23□□□□□ -0.29
SIRPB1-213ENST00000568365 BCANQ96GW7 911 aa13.21□□□□□ -0.3
SIRPB1-213ENST00000568365 FHOD3Q2V2M9 1422 aa13.21□□□□□ -0.3
SIRPB1-213ENST00000568365 FAM50AQ14320 339 aaKnown RBP13.2□□□□□ -0.3
SIRPB1-213ENST00000568365 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
SIRPB1-213ENST00000568365 PLB1Q6P1J6 1458 aa13.18□□□□□ -0.3
SIRPB1-213ENST00000568365 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
SIRPB1-213ENST00000568365 ABCA8O94911 1581 aa13.18□□□□□ -0.3
SIRPB1-213ENST00000568365 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
SIRPB1-213ENST00000568365 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
SIRPB1-213ENST00000568365 CASKIN1Q8WXD9 1431 aa13.17□□□□□ -0.3
SIRPB1-213ENST00000568365 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
SIRPB1-213ENST00000568365 TONSLQ96HA7 1378 aa13.15□□□□□ -0.3
SIRPB1-213ENST00000568365 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
SIRPB1-213ENST00000568365 FBXO41Q8TF61 875 aa13.14□□□□□ -0.31
SIRPB1-213ENST00000568365 RBM19Q9Y4C8 960 aaKnown RBP13.14□□□□□ -0.31
SIRPB1-213ENST00000568365 CCDC18Q5T9S5 1454 aa13.14□□□□□ -0.31
SIRPB1-213ENST00000568365 PTPN23Q9H3S7 1636 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms