RNA–Protein interactions for RNA: ENST00000566938.5

BBS4-212, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-212ENST00000566938 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
BBS4-212ENST00000566938 TOPBP1Q92547 1522 aa11.24□□□□□ -0.61
BBS4-212ENST00000566938 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
BBS4-212ENST00000566938 ZNF608Q9ULD9 1512 aaPredicted RBP11.22□□□□□ -0.61
BBS4-212ENST00000566938 DNMBPQ6XZF7 1577 aa11.18□□□□□ -0.62
BBS4-212ENST00000566938 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
BBS4-212ENST00000566938 POLA1P09884 1462 aaPredicted RBP11.12□□□□□ -0.63
BBS4-212ENST00000566938 EIF4G3O43432 1585 aaKnown RBP11.12□□□□□ -0.63
BBS4-212ENST00000566938 SPDYE2BA6NHP3 402 aa11.12□□□□□ -0.63
BBS4-212ENST00000566938 SPDYE6P0CI01 402 aa11.12□□□□□ -0.63
BBS4-212ENST00000566938 SPDYE2Q495Y8 402 aa11.12□□□□□ -0.63
BBS4-212ENST00000566938 AQRO60306 1485 aaKnown RBP eCLIP11.12□□□□□ -0.636e-6■■■■□ 21
BBS4-212ENST00000566938 RIMBP3CA6NJZ7 1639 aa11.1□□□□□ -0.63
BBS4-212ENST00000566938 RIMBP3BA6NNM3 1639 aa11.1□□□□□ -0.63
BBS4-212ENST00000566938 RIMBP3Q9UFD9 1639 aa11.1□□□□□ -0.63
BBS4-212ENST00000566938 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
BBS4-212ENST00000566938 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
BBS4-212ENST00000566938 SOGA1O94964 1423 aa11.08□□□□□ -0.64
BBS4-212ENST00000566938 RAD54L2Q9Y4B4 1467 aa11.06□□□□□ -0.64
BBS4-212ENST00000566938 AKT1S1Q96B36 256 aa11.05□□□□□ -0.64
BBS4-212ENST00000566938 WDR97A6NE52 1622 aa11.05□□□□□ -0.64
BBS4-212ENST00000566938 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
BBS4-212ENST00000566938 FGD5Q6ZNL6 1462 aa11.03□□□□□ -0.64
BBS4-212ENST00000566938 CUX1P39880 1505 aa11.03□□□□□ -0.64
BBS4-212ENST00000566938 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
BBS4-212ENST00000566938 CYB5RLQ6IPT4 315 aa11.02□□□□□ -0.65
BBS4-212ENST00000566938 CHD1O14646 1710 aa11.01□□□□□ -0.65
BBS4-212ENST00000566938 ARAP1Q96P48 1450 aa11□□□□□ -0.65
BBS4-212ENST00000566938 MAGI1Q96QZ7 1491 aaPredicted RBP11□□□□□ -0.65
BBS4-212ENST00000566938 SNAPC4Q5SXM2 1469 aa10.99□□□□□ -0.65
BBS4-212ENST00000566938 GRIN2BQ13224 1484 aa10.98□□□□□ -0.65
BBS4-212ENST00000566938 CLASP1Q7Z460 1538 aa10.97□□□□□ -0.65
BBS4-212ENST00000566938 CHMP7Q8WUX9 453 aaPredicted RBP10.96□□□□□ -0.65
BBS4-212ENST00000566938 SYNJ2O15056 1496 aa10.95□□□□□ -0.66
BBS4-212ENST00000566938 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
BBS4-212ENST00000566938 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
BBS4-212ENST00000566938 FKBP8Q14318 412 aa10.94□□□□□ -0.66
BBS4-212ENST00000566938 GAPVD1Q14C86 1478 aa10.93□□□□□ -0.66
BBS4-212ENST00000566938 SYNJ1O43426 1573 aa10.92□□□□□ -0.66
BBS4-212ENST00000566938 REM2Q8IYK8 340 aaPredicted RBP10.92□□□□□ -0.66
BBS4-212ENST00000566938 SUPT5HO00267 1087 aaKnown RBP10.9□□□□□ -0.66
BBS4-212ENST00000566938 ABCA5Q8WWZ7 1642 aa10.89□□□□□ -0.67
BBS4-212ENST00000566938 WRNQ14191 1432 aaPredicted RBP eCLIP10.88□□□□□ -0.67
BBS4-212ENST00000566938 PBRM1Q86U86 1689 aa10.85□□□□□ -0.67
BBS4-212ENST00000566938 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
BBS4-212ENST00000566938 TOP2BQ02880 1626 aa10.84□□□□□ -0.67
BBS4-212ENST00000566938 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
BBS4-212ENST00000566938 GRIN2AQ12879 1464 aa10.84□□□□□ -0.67
BBS4-212ENST00000566938 NUP160Q12769 1436 aa10.84□□□□□ -0.67
BBS4-212ENST00000566938 BIVM-ERCC5R4GMW8 1640 aa10.83□□□□□ -0.68
BBS4-212ENST00000566938 FHAD1B1AJZ9 1412 aa10.81□□□□□ -0.68
BBS4-212ENST00000566938 ADAMTS12P58397 1594 aa10.8□□□□□ -0.68
BBS4-212ENST00000566938 ERICH3Q5RHP9 1530 aa10.79□□□□□ -0.68
BBS4-212ENST00000566938 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
BBS4-212ENST00000566938 CEP170Q5SW79 1584 aa10.78□□□□□ -0.68
BBS4-212ENST00000566938 CHRDL2Q6WN34 429 aa10.78□□□□□ -0.68
BBS4-212ENST00000566938 ERCC6L2Q5T890 1561 aa10.76□□□□□ -0.69
BBS4-212ENST00000566938 SHROOM2Q13796 1616 aa10.76□□□□□ -0.69
BBS4-212ENST00000566938 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
BBS4-212ENST00000566938 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
BBS4-212ENST00000566938 PRR29P0C7W0 189 aa10.71□□□□□ -0.69
BBS4-212ENST00000566938 PRG4Q92954 1404 aaPredicted RBP10.69□□□□□ -0.7
BBS4-212ENST00000566938 PROM2Q8N271 834 aa10.69□□□□□ -0.7
BBS4-212ENST00000566938 IGF1RP08069 1367 aa10.68□□□□□ -0.7
BBS4-212ENST00000566938 RUSC2Q8N2Y8 1516 aa10.65□□□□□ -0.7
BBS4-212ENST00000566938 KIF27Q86VH2 1401 aa10.65□□□□□ -0.7
BBS4-212ENST00000566938 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
BBS4-212ENST00000566938 FBXO3Q9UK99 471 aa10.61□□□□□ -0.71
BBS4-212ENST00000566938 ABCC10Q5T3U5 1492 aa10.6□□□□□ -0.71
BBS4-212ENST00000566938 MAPKBP1O60336 1514 aa10.59□□□□□ -0.71
BBS4-212ENST00000566938 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
BBS4-212ENST00000566938 CUL7Q14999 1698 aa10.59□□□□□ -0.71
BBS4-212ENST00000566938 CARMIL1Q5VZK9 1371 aa10.58□□□□□ -0.72
BBS4-212ENST00000566938 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
BBS4-212ENST00000566938 KIF13AQ9H1H9 1805 aa10.57□□□□□ -0.72
BBS4-212ENST00000566938 NPM1P06748 294 aaKnown RBP eCLIP10.57□□□□□ -0.72
BBS4-212ENST00000566938 PRKAR2AP13861 404 aaKnown RBP10.56□□□□□ -0.72
BBS4-212ENST00000566938 FAM69CQ0P6D2 419 aa10.56□□□□□ -0.72
BBS4-212ENST00000566938 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
BBS4-212ENST00000566938 POTEHQ6S545 545 aa10.55□□□□□ -0.72
BBS4-212ENST00000566938 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
BBS4-212ENST00000566938 PTPRGP23470 1445 aa10.53□□□□□ -0.72
BBS4-212ENST00000566938 DIP2BQ9P265 1576 aa10.52□□□□□ -0.72
BBS4-212ENST00000566938 CHADLQ6NUI6 762 aa10.52□□□□□ -0.73
BBS4-212ENST00000566938 TNIKQ9UKE5 1360 aa10.52□□□□□ -0.73
BBS4-212ENST00000566938 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
BBS4-212ENST00000566938 MIER1Q8N108 512 aa10.5□□□□□ -0.73
BBS4-212ENST00000566938 PLCD3Q8N3E9 789 aa10.5□□□□□ -0.73
BBS4-212ENST00000566938 UHRF1BP1LA0JNW5 1464 aa10.49□□□□□ -0.73
BBS4-212ENST00000566938 ABCC2Q92887 1545 aa10.48□□□□□ -0.73
BBS4-212ENST00000566938 DISP1Q96F81 1524 aa10.48□□□□□ -0.73
BBS4-212ENST00000566938 IQGAP2Q13576 1575 aa10.48□□□□□ -0.73
BBS4-212ENST00000566938 RAPGEF2Q9Y4G8 1499 aa10.47□□□□□ -0.73
BBS4-212ENST00000566938 UACAQ9BZF9 1416 aa10.46□□□□□ -0.74
BBS4-212ENST00000566938 UGGT2Q9NYU1 1516 aa10.46□□□□□ -0.74
BBS4-212ENST00000566938 PLB1Q6P1J6 1458 aa10.45□□□□□ -0.74
BBS4-212ENST00000566938 CREBZFQ9NS37 354 aa10.45□□□□□ -0.74
BBS4-212ENST00000566938 GLI2P10070 1586 aa10.44□□□□□ -0.74
BBS4-212ENST00000566938 ASXL2Q76L83 1435 aa10.44□□□□□ -0.74
BBS4-212ENST00000566938 KDM5BQ9UGL1 1544 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms