RNA–Protein interactions for RNA: ENST00000566938.5

BBS4-212, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-212ENST00000566938 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
BBS4-212ENST00000566938 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
BBS4-212ENST00000566938 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
BBS4-212ENST00000566938 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
BBS4-212ENST00000566938 PLPPR3Q6T4P5 718 aa15.58■□□□□ 0.08
BBS4-212ENST00000566938 FOXD1Q16676 465 aa15.57■□□□□ 0.08
BBS4-212ENST00000566938 NISCHQ9Y2I1 1504 aa15.27■□□□□ 0.03
BBS4-212ENST00000566938 ADRA2BP18089 450 aa14.9□□□□□ -0.02
BBS4-212ENST00000566938 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
BBS4-212ENST00000566938 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
BBS4-212ENST00000566938 MSH5O43196 834 aa14.48□□□□□ -0.09
BBS4-212ENST00000566938 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
BBS4-212ENST00000566938 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
BBS4-212ENST00000566938 ABCC9O60706 1549 aa13.68□□□□□ -0.22
BBS4-212ENST00000566938 CCDC180Q9P1Z9 1646 aa13.67□□□□□ -0.22
BBS4-212ENST00000566938 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
BBS4-212ENST00000566938 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
BBS4-212ENST00000566938 DMRT2Q9Y5R5 561 aa13.38□□□□□ -0.27
BBS4-212ENST00000566938 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
BBS4-212ENST00000566938 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
BBS4-212ENST00000566938 KCNA4P22459 653 aa13.23□□□□□ -0.29
BBS4-212ENST00000566938 NPM3O75607 178 aaKnown RBP13.09□□□□□ -0.31
BBS4-212ENST00000566938 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
BBS4-212ENST00000566938 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
BBS4-212ENST00000566938 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
BBS4-212ENST00000566938 NACADO15069 1562 aa12.97□□□□□ -0.33
BBS4-212ENST00000566938 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
BBS4-212ENST00000566938 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
BBS4-212ENST00000566938 MYO15BQ96JP2 1530 aa12.85□□□□□ -0.35
BBS4-212ENST00000566938 DCAF8L2P0C7V8 631 aa12.81□□□□□ -0.36
BBS4-212ENST00000566938 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
BBS4-212ENST00000566938 BICRAQ9NZM4 1560 aa12.68□□□□□ -0.38
BBS4-212ENST00000566938 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
BBS4-212ENST00000566938 DCAF1Q9Y4B6 1507 aa12.66□□□□□ -0.38
BBS4-212ENST00000566938 ZCCHC6Q5VYS8 1495 aaKnown RBP12.65□□□□□ -0.38
BBS4-212ENST00000566938 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
BBS4-212ENST00000566938 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
BBS4-212ENST00000566938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.54□□□□□ -0.4
BBS4-212ENST00000566938 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
BBS4-212ENST00000566938 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
BBS4-212ENST00000566938 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
BBS4-212ENST00000566938 CECR2Q9BXF3 1484 aa12.35□□□□□ -0.43
BBS4-212ENST00000566938 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
BBS4-212ENST00000566938 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
BBS4-212ENST00000566938 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
BBS4-212ENST00000566938 C1QBPQ07021 282 aaKnown RBP12.22□□□□□ -0.45
BBS4-212ENST00000566938 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
BBS4-212ENST00000566938 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
BBS4-212ENST00000566938 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
BBS4-212ENST00000566938 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
BBS4-212ENST00000566938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
BBS4-212ENST00000566938 HNRNPUL2Q1KMD3 747 aaKnown RBP12.14□□□□□ -0.47
BBS4-212ENST00000566938 ZBTB22O15209 634 aa12.11□□□□□ -0.47
BBS4-212ENST00000566938 APLP2Q06481 763 aa12.08□□□□□ -0.48
BBS4-212ENST00000566938 SAMD1Q6SPF0 538 aaPredicted RBP12.07□□□□□ -0.48
BBS4-212ENST00000566938 NCAPD3P42695 1498 aa12.02□□□□□ -0.49
BBS4-212ENST00000566938 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
BBS4-212ENST00000566938 CAPN15O75808 1086 aa11.98□□□□□ -0.49
BBS4-212ENST00000566938 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
BBS4-212ENST00000566938 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
BBS4-212ENST00000566938 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
BBS4-212ENST00000566938 TRHP20396 242 aaPredicted RBP11.89□□□□□ -0.51
BBS4-212ENST00000566938 HMGXB3Q12766 1538 aa11.88□□□□□ -0.51
BBS4-212ENST00000566938 SMARCA4P51532 1647 aa11.88□□□□□ -0.51
BBS4-212ENST00000566938 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
BBS4-212ENST00000566938 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
BBS4-212ENST00000566938 CUX2O14529 1486 aa11.85□□□□□ -0.51
BBS4-212ENST00000566938 PEG3Q9GZU2 1588 aa11.83□□□□□ -0.52
BBS4-212ENST00000566938 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.52
BBS4-212ENST00000566938 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
BBS4-212ENST00000566938 ERCC6Q03468 1493 aa11.79□□□□□ -0.52
BBS4-212ENST00000566938 BAZ1BQ9UIG0 1483 aaKnown RBP11.78□□□□□ -0.52
BBS4-212ENST00000566938 NESP48681 1621 aa11.75□□□□□ -0.53
BBS4-212ENST00000566938 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
BBS4-212ENST00000566938 MROH2BQ7Z745 1585 aa11.74□□□□□ -0.53
BBS4-212ENST00000566938 ABCB7O75027 752 aa11.71□□□□□ -0.53
BBS4-212ENST00000566938 DSG3P32926 999 aa11.7□□□□□ -0.54
BBS4-212ENST00000566938 LAMC3Q9Y6N6 1575 aa11.69□□□□□ -0.54
BBS4-212ENST00000566938 THOC2Q8NI27 1593 aaKnown RBP11.64□□□□□ -0.55
BBS4-212ENST00000566938 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
BBS4-212ENST00000566938 POLA2Q14181 598 aa11.63□□□□□ -0.55
BBS4-212ENST00000566938 CADPSQ9ULU8 1353 aa11.63□□□□□ -0.55
BBS4-212ENST00000566938 WIZO95785 1651 aa11.55□□□□□ -0.56
BBS4-212ENST00000566938 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
BBS4-212ENST00000566938 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.56
BBS4-212ENST00000566938 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.57
BBS4-212ENST00000566938 WDR62O43379 1518 aa11.51□□□□□ -0.57
BBS4-212ENST00000566938 CFTRP13569 1480 aa11.5□□□□□ -0.57
BBS4-212ENST00000566938 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
BBS4-212ENST00000566938 FANCD2Q9BXW9 1451 aa11.45□□□□□ -0.58
BBS4-212ENST00000566938 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
BBS4-212ENST00000566938 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
BBS4-212ENST00000566938 FBLN2P98095 1184 aa11.41□□□□□ -0.58
BBS4-212ENST00000566938 URB2Q14146 1524 aaKnown RBP11.36□□□□□ -0.59
BBS4-212ENST00000566938 CCDC88BA6NC98 1476 aa11.33□□□□□ -0.6
BBS4-212ENST00000566938 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
BBS4-212ENST00000566938 TRIM41Q8WV44 630 aa11.26□□□□□ -0.61
BBS4-212ENST00000566938 PRDM2Q13029 1718 aa11.26□□□□□ -0.61
BBS4-212ENST00000566938 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
BBS4-212ENST00000566938 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms