RNA–Protein interactions for RNA: ENST00000566568.1

BCKDK-207, Transcript of branched chain ketoacid dehydrogenase kinase, humanhuman

TSL 5

Gene BCKDK, Length 2,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDK-207ENST00000566568 P3H3Q8IVL6 736 aa23.51■■□□□ 1.35
BCKDK-207ENST00000566568 LRRC9Q6ZRR7 1453 aa23.48■■□□□ 1.35
BCKDK-207ENST00000566568 PHLDB1Q86UU1 1377 aa23.48■■□□□ 1.35
BCKDK-207ENST00000566568 ATP1B4Q9UN42 357 aaPredicted RBP23.47■■□□□ 1.35
BCKDK-207ENST00000566568 MAP3K1Q13233 1512 aa23.47■■□□□ 1.35
BCKDK-207ENST00000566568 NESP48681 1621 aa23.47■■□□□ 1.35
BCKDK-207ENST00000566568 FAM50AQ14320 339 aaKnown RBP23.47■■□□□ 1.35
BCKDK-207ENST00000566568 ANP32EQ9BTT0 268 aa23.46■■□□□ 1.35
BCKDK-207ENST00000566568 MAPKBP1O60336 1514 aa23.44■■□□□ 1.34
BCKDK-207ENST00000566568 SETD5Q9C0A6 1442 aa23.43■■□□□ 1.34
BCKDK-207ENST00000566568 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
BCKDK-207ENST00000566568 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
BCKDK-207ENST00000566568 RAD54L2Q9Y4B4 1467 aa23.37■■□□□ 1.33
BCKDK-207ENST00000566568 FHOD3Q2V2M9 1422 aa23.37■■□□□ 1.33
BCKDK-207ENST00000566568 PCF11O94913 1555 aaKnown RBP23.36■■□□□ 1.33
BCKDK-207ENST00000566568 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
BCKDK-207ENST00000566568 SIN3AQ96ST3 1273 aa23.35■■□□□ 1.33
BCKDK-207ENST00000566568 CFAP43Q8NDM7 1665 aa23.29■■□□□ 1.32
BCKDK-207ENST00000566568 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
BCKDK-207ENST00000566568 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
BCKDK-207ENST00000566568 KCNH8Q96L42 1107 aa23.27■■□□□ 1.32
BCKDK-207ENST00000566568 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
BCKDK-207ENST00000566568 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
BCKDK-207ENST00000566568 TOPBP1Q92547 1522 aa23.26■■□□□ 1.31
BCKDK-207ENST00000566568 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
BCKDK-207ENST00000566568 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
BCKDK-207ENST00000566568 CASKIN1Q8WXD9 1431 aa23.22■■□□□ 1.31
BCKDK-207ENST00000566568 DDX10Q13206 875 aaKnown RBP23.21■■□□□ 1.31
BCKDK-207ENST00000566568 EFCAB5A4FU69 1503 aa23.2■■□□□ 1.31
BCKDK-207ENST00000566568 LAMC3Q9Y6N6 1575 aa23.19■■□□□ 1.3
BCKDK-207ENST00000566568 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.32e-10■■■■□ 25.5
BCKDK-207ENST00000566568 HIRIP3Q9BW71 556 aaPredicted RBP23.14■■□□□ 1.3
BCKDK-207ENST00000566568 FMN1Q68DA7 1419 aa23.13■■□□□ 1.29
BCKDK-207ENST00000566568 CUL7Q14999 1698 aa23.13■■□□□ 1.29
BCKDK-207ENST00000566568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.12■■□□□ 1.29
BCKDK-207ENST00000566568 TIMELESSQ9UNS1 1208 aa23.12■■□□□ 1.29
BCKDK-207ENST00000566568 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
BCKDK-207ENST00000566568 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
BCKDK-207ENST00000566568 PPP1R15AO75807 674 aaPredicted RBP23.1■■□□□ 1.29
BCKDK-207ENST00000566568 TDRD9Q8NDG6 1382 aaKnown RBP23.09■■□□□ 1.29
BCKDK-207ENST00000566568 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
BCKDK-207ENST00000566568 CTTNBP2Q8WZ74 1663 aa23.08■■□□□ 1.29
BCKDK-207ENST00000566568 SNAPC4Q5SXM2 1469 aa23.08■■□□□ 1.28
BCKDK-207ENST00000566568 PDS5BQ9NTI5 1447 aa23.06■■□□□ 1.28
BCKDK-207ENST00000566568 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
BCKDK-207ENST00000566568 PTPRKQ15262 1439 aa23.03■■□□□ 1.28
BCKDK-207ENST00000566568 CCDC18Q5T9S5 1454 aa23.02■■□□□ 1.28
BCKDK-207ENST00000566568 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
BCKDK-207ENST00000566568 HFM1A2PYH4 1435 aa22.98■■□□□ 1.27
BCKDK-207ENST00000566568 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
BCKDK-207ENST00000566568 NCOA2Q15596 1464 aa22.97■■□□□ 1.27
BCKDK-207ENST00000566568 UACAQ9BZF9 1416 aa22.95■■□□□ 1.26
BCKDK-207ENST00000566568 MYOM3Q5VTT5 1437 aa22.94■■□□□ 1.26
BCKDK-207ENST00000566568 SAMD9Q5K651 1589 aa22.94■■□□□ 1.26
BCKDK-207ENST00000566568 ANP32CO43423 234 aa22.94■■□□□ 1.26
BCKDK-207ENST00000566568 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
BCKDK-207ENST00000566568 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
BCKDK-207ENST00000566568 BCANQ96GW7 911 aa22.93■■□□□ 1.26
BCKDK-207ENST00000566568 PTPN23Q9H3S7 1636 aa22.92■■□□□ 1.26
BCKDK-207ENST00000566568 NAIPQ13075 1403 aa22.92■■□□□ 1.26
BCKDK-207ENST00000566568 TSHZ2Q9NRE2 1034 aa22.9■■□□□ 1.26
BCKDK-207ENST00000566568 LRRIQ1Q96JM4 1722 aa22.89■■□□□ 1.26
BCKDK-207ENST00000566568 CCER2I3L3R5 266 aa22.88■■□□□ 1.25
BCKDK-207ENST00000566568 FKBP8Q14318 412 aa22.88■■□□□ 1.25
BCKDK-207ENST00000566568 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
BCKDK-207ENST00000566568 RRP7BPQ9NSQ0 103 aa22.86■■□□□ 1.25
BCKDK-207ENST00000566568 EHBP1L1Q8N3D4 1523 aa22.85■■□□□ 1.25
BCKDK-207ENST00000566568 CHIC2Q9UKJ5 165 aa22.85■■□□□ 1.25
BCKDK-207ENST00000566568 SUPT6HQ7KZ85 1726 aaKnown RBP22.84■■□□□ 1.25
BCKDK-207ENST00000566568 THOC2Q8NI27 1593 aaKnown RBP22.83■■□□□ 1.24
BCKDK-207ENST00000566568 ERCC6Q03468 1493 aa22.83■■□□□ 1.24
BCKDK-207ENST00000566568 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
BCKDK-207ENST00000566568 UGGT2Q9NYU1 1516 aa22.8■■□□□ 1.24
BCKDK-207ENST00000566568 MRC2Q9UBG0 1479 aa22.78■■□□□ 1.24
BCKDK-207ENST00000566568 ARID3CA6NKF2 412 aa22.78■■□□□ 1.24
BCKDK-207ENST00000566568 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
BCKDK-207ENST00000566568 NEFLP07196 543 aa22.75■■□□□ 1.23
BCKDK-207ENST00000566568 KDM5BQ9UGL1 1544 aa22.74■■□□□ 1.23
BCKDK-207ENST00000566568 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
BCKDK-207ENST00000566568 TCOF1Q13428 1488 aaKnown RBP22.7■■□□□ 1.22
BCKDK-207ENST00000566568 EPRSP07814 1512 aaKnown RBP22.69■■□□□ 1.22
BCKDK-207ENST00000566568 HECW1Q76N89 1606 aa22.68■■□□□ 1.22
BCKDK-207ENST00000566568 HSPA5P11021 654 aaKnown RBP22.68■■□□□ 1.22
BCKDK-207ENST00000566568 CDK13Q14004 1512 aaKnown RBP22.68■■□□□ 1.22
BCKDK-207ENST00000566568 DENND4BO75064 1496 aaPredicted RBP22.68■■□□□ 1.22
BCKDK-207ENST00000566568 IQGAP2Q13576 1575 aa22.66■■□□□ 1.22
BCKDK-207ENST00000566568 WASHC2AQ641Q2 1341 aa22.65■■□□□ 1.22
BCKDK-207ENST00000566568 KDM6BO15054 1643 aa22.65■■□□□ 1.22
BCKDK-207ENST00000566568 FOXD1Q16676 465 aa22.64■■□□□ 1.22
BCKDK-207ENST00000566568 MPHOSPH9Q99550 1183 aa22.64■■□□□ 1.22
BCKDK-207ENST00000566568 WDR62O43379 1518 aa22.63■■□□□ 1.21
BCKDK-207ENST00000566568 AKNAQ7Z591 1439 aa22.61■■□□□ 1.21
BCKDK-207ENST00000566568 GCC2Q8IWJ2 1684 aa22.61■■□□□ 1.21
BCKDK-207ENST00000566568 HNRNPUQ00839 825 aaKnown RBP eCLIP22.61■■□□□ 1.21
BCKDK-207ENST00000566568 MIA2Q96PC5 1412 aa22.61■■□□□ 1.21
BCKDK-207ENST00000566568 EIF4G2P78344 907 aaKnown RBP eCLIP22.6■■□□□ 1.21
BCKDK-207ENST00000566568 PBRM1Q86U86 1689 aa22.6■■□□□ 1.21
BCKDK-207ENST00000566568 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
BCKDK-207ENST00000566568 ADAMTS12P58397 1594 aa22.58■■□□□ 1.21
BCKDK-207ENST00000566568 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms