RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.56
SCAMP2-207ENST00000566480 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
SCAMP2-207ENST00000566480 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
SCAMP2-207ENST00000566480 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
SCAMP2-207ENST00000566480 ABCA10Q8WWZ4 1543 aa18.43■□□□□ 0.54
SCAMP2-207ENST00000566480 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
SCAMP2-207ENST00000566480 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
SCAMP2-207ENST00000566480 CHD1O14646 1710 aa18.36■□□□□ 0.53
SCAMP2-207ENST00000566480 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-207ENST00000566480 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
SCAMP2-207ENST00000566480 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
SCAMP2-207ENST00000566480 ITGAEP38570 1179 aa18.31■□□□□ 0.52
SCAMP2-207ENST00000566480 FHOD3Q2V2M9 1422 aa18.29■□□□□ 0.52
SCAMP2-207ENST00000566480 FBLN2P98095 1184 aa18.27■□□□□ 0.51
SCAMP2-207ENST00000566480 CUL7Q14999 1698 aa18.25■□□□□ 0.51
SCAMP2-207ENST00000566480 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
SCAMP2-207ENST00000566480 TIAM1Q13009 1591 aa18.23■□□□□ 0.51
SCAMP2-207ENST00000566480 RRBP1Q9P2E9 1410 aaKnown RBP18.23■□□□□ 0.51
SCAMP2-207ENST00000566480 CCNB3Q8WWL7 1395 aa18.22■□□□□ 0.51
SCAMP2-207ENST00000566480 PCF11O94913 1555 aaKnown RBP18.22■□□□□ 0.51
SCAMP2-207ENST00000566480 ADAMTS12P58397 1594 aa18.21■□□□□ 0.51
SCAMP2-207ENST00000566480 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
SCAMP2-207ENST00000566480 CTTNBP2Q8WZ74 1663 aa18.19■□□□□ 0.5
SCAMP2-207ENST00000566480 LRRC9Q6ZRR7 1453 aa18.18■□□□□ 0.5
SCAMP2-207ENST00000566480 DIEXFQ68CQ4 756 aaKnown RBP18.17■□□□□ 0.5
SCAMP2-207ENST00000566480 PHLDB1Q86UU1 1377 aa18.16■□□□□ 0.5
SCAMP2-207ENST00000566480 MAGI1Q96QZ7 1491 aaPredicted RBP18.15■□□□□ 0.5
SCAMP2-207ENST00000566480 DHX57Q6P158 1386 aaKnown RBP18.13■□□□□ 0.49
SCAMP2-207ENST00000566480 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
SCAMP2-207ENST00000566480 EFCAB5A4FU69 1503 aa18.12■□□□□ 0.49
SCAMP2-207ENST00000566480 MAP3K1Q13233 1512 aa18.12■□□□□ 0.49
SCAMP2-207ENST00000566480 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
SCAMP2-207ENST00000566480 PELP1Q8IZL8 1130 aaKnown RBP18.12■□□□□ 0.49
SCAMP2-207ENST00000566480 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
SCAMP2-207ENST00000566480 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
SCAMP2-207ENST00000566480 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
SCAMP2-207ENST00000566480 CFAP43Q8NDM7 1665 aa18.09■□□□□ 0.49
SCAMP2-207ENST00000566480 CASKIN1Q8WXD9 1431 aa18.08■□□□□ 0.49
SCAMP2-207ENST00000566480 DNAJC5Q9H3Z4 198 aa18.08■□□□□ 0.49
SCAMP2-207ENST00000566480 GRIN2AQ12879 1464 aa18.08■□□□□ 0.48
SCAMP2-207ENST00000566480 FYCO1Q9BQS8 1478 aa18.08■□□□□ 0.48
SCAMP2-207ENST00000566480 FMN1Q68DA7 1419 aa18.05■□□□□ 0.48
SCAMP2-207ENST00000566480 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
SCAMP2-207ENST00000566480 RAB3GAP2Q9H2M9 1393 aa18.02■□□□□ 0.48
SCAMP2-207ENST00000566480 SAMD9Q5K651 1589 aa18.02■□□□□ 0.48
SCAMP2-207ENST00000566480 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
SCAMP2-207ENST00000566480 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
SCAMP2-207ENST00000566480 ARID3CA6NKF2 412 aa18■□□□□ 0.47
SCAMP2-207ENST00000566480 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
SCAMP2-207ENST00000566480 LRRIQ1Q96JM4 1722 aa17.98■□□□□ 0.47
SCAMP2-207ENST00000566480 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
SCAMP2-207ENST00000566480 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
SCAMP2-207ENST00000566480 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
SCAMP2-207ENST00000566480 CLSPNQ9HAW4 1339 aa17.95■□□□□ 0.46
SCAMP2-207ENST00000566480 NUP160Q12769 1436 aa17.94■□□□□ 0.46
SCAMP2-207ENST00000566480 SETD5Q9C0A6 1442 aa17.93■□□□□ 0.46
SCAMP2-207ENST00000566480 IQGAP2Q13576 1575 aa17.93■□□□□ 0.46
SCAMP2-207ENST00000566480 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
SCAMP2-207ENST00000566480 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
SCAMP2-207ENST00000566480 NCOA2Q15596 1464 aa17.87■□□□□ 0.45
SCAMP2-207ENST00000566480 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
SCAMP2-207ENST00000566480 MAGI3Q5TCQ9 1506 aa17.86■□□□□ 0.45
SCAMP2-207ENST00000566480 SIN3AQ96ST3 1273 aa17.86■□□□□ 0.45
SCAMP2-207ENST00000566480 MIER1Q8N108 512 aa17.85■□□□□ 0.45
SCAMP2-207ENST00000566480 SHROOM2Q13796 1616 aa17.85■□□□□ 0.45
SCAMP2-207ENST00000566480 NEUROD1Q13562 356 aa17.84■□□□□ 0.45
SCAMP2-207ENST00000566480 CDK13Q14004 1512 aaKnown RBP17.83■□□□□ 0.45
SCAMP2-207ENST00000566480 PTPRKQ15262 1439 aa17.83■□□□□ 0.44
SCAMP2-207ENST00000566480 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
SCAMP2-207ENST00000566480 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
SCAMP2-207ENST00000566480 YTHDC1Q96MU7 727 aaKnown RBP17.8■□□□□ 0.44
SCAMP2-207ENST00000566480 SUPT6HQ7KZ85 1726 aaKnown RBP17.8■□□□□ 0.44
SCAMP2-207ENST00000566480 EPRSP07814 1512 aaKnown RBP17.79■□□□□ 0.44
SCAMP2-207ENST00000566480 EHBP1L1Q8N3D4 1523 aa17.79■□□□□ 0.44
SCAMP2-207ENST00000566480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCAMP2-207ENST00000566480 HECW1Q76N89 1606 aa17.78■□□□□ 0.44
SCAMP2-207ENST00000566480 KIAA0586Q9BVV6 1533 aa17.78■□□□□ 0.44
SCAMP2-207ENST00000566480 UGGT2Q9NYU1 1516 aa17.78■□□□□ 0.44
SCAMP2-207ENST00000566480 PRG4Q92954 1404 aaPredicted RBP17.77■□□□□ 0.44
SCAMP2-207ENST00000566480 CHIC2Q9UKJ5 165 aa17.77■□□□□ 0.44
SCAMP2-207ENST00000566480 DISP1Q96F81 1524 aa17.77■□□□□ 0.44
SCAMP2-207ENST00000566480 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.43
SCAMP2-207ENST00000566480 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
SCAMP2-207ENST00000566480 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
SCAMP2-207ENST00000566480 ACIN1Q9UKV3 1341 aaKnown RBP17.75■□□□□ 0.43
SCAMP2-207ENST00000566480 KIAA0556O60303 1618 aa17.74■□□□□ 0.43
SCAMP2-207ENST00000566480 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
SCAMP2-207ENST00000566480 PTPN23Q9H3S7 1636 aa17.73■□□□□ 0.43
SCAMP2-207ENST00000566480 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
SCAMP2-207ENST00000566480 NAIPQ13075 1403 aa17.68■□□□□ 0.42
SCAMP2-207ENST00000566480 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
SCAMP2-207ENST00000566480 NUP153P49790 1475 aaKnown RBP17.67■□□□□ 0.42
SCAMP2-207ENST00000566480 PLB1Q6P1J6 1458 aa17.65■□□□□ 0.42
SCAMP2-207ENST00000566480 ZNF644Q9H582 1327 aaPredicted RBP17.64■□□□□ 0.41
SCAMP2-207ENST00000566480 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
SCAMP2-207ENST00000566480 HIRIP3Q9BW71 556 aaPredicted RBP17.63■□□□□ 0.41
SCAMP2-207ENST00000566480 PHF23Q9BUL5 403 aaPredicted RBP17.61■□□□□ 0.41
SCAMP2-207ENST00000566480 UACAQ9BZF9 1416 aa17.61■□□□□ 0.41
SCAMP2-207ENST00000566480 TCOF1Q13428 1488 aaKnown RBP17.6■□□□□ 0.41
SCAMP2-207ENST00000566480 TRIM52Q96A61 297 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms