RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 CHADLQ6NUI6 762 aa16.25■□□□□ 0.19
CDH13-207ENST00000565636 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
CDH13-207ENST00000565636 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
CDH13-207ENST00000565636 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
CDH13-207ENST00000565636 EVX2Q03828 476 aa16.11■□□□□ 0.17
CDH13-207ENST00000565636 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
CDH13-207ENST00000565636 NESP48681 1621 aa16.06■□□□□ 0.16
CDH13-207ENST00000565636 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
CDH13-207ENST00000565636 THOC2Q8NI27 1593 aaKnown RBP16.02■□□□□ 0.16
CDH13-207ENST00000565636 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
CDH13-207ENST00000565636 CD44P16070 742 aaKnown RBP15.98■□□□□ 0.15
CDH13-207ENST00000565636 CREBZFQ9NS37 354 aa15.96■□□□□ 0.15
CDH13-207ENST00000565636 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
CDH13-207ENST00000565636 KIF21AQ7Z4S6 1674 aa15.95■□□□□ 0.14
CDH13-207ENST00000565636 CLCN6P51797 869 aa15.9■□□□□ 0.14
CDH13-207ENST00000565636 GABBR2O75899 941 aa15.89■□□□□ 0.13
CDH13-207ENST00000565636 PROM2Q8N271 834 aa15.89■□□□□ 0.13
CDH13-207ENST00000565636 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDH13-207ENST00000565636 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
CDH13-207ENST00000565636 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
CDH13-207ENST00000565636 WDR62O43379 1518 aa15.83■□□□□ 0.12
CDH13-207ENST00000565636 WIZO95785 1651 aa15.82■□□□□ 0.12
CDH13-207ENST00000565636 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
CDH13-207ENST00000565636 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
CDH13-207ENST00000565636 CFTRP13569 1480 aa15.76■□□□□ 0.11
CDH13-207ENST00000565636 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
CDH13-207ENST00000565636 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
CDH13-207ENST00000565636 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.1
CDH13-207ENST00000565636 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
CDH13-207ENST00000565636 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
CDH13-207ENST00000565636 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
CDH13-207ENST00000565636 MNX1P50219 401 aaPredicted RBP15.66■□□□□ 0.1
CDH13-207ENST00000565636 FKBP8Q14318 412 aa15.66■□□□□ 0.1
CDH13-207ENST00000565636 MIER1Q8N108 512 aa15.64■□□□□ 0.09
CDH13-207ENST00000565636 DCBLD2Q96PD2 775 aa15.62■□□□□ 0.09
CDH13-207ENST00000565636 PLCD3Q8N3E9 789 aa15.56■□□□□ 0.08
CDH13-207ENST00000565636 ABCC8Q09428 1581 aa15.55■□□□□ 0.08
CDH13-207ENST00000565636 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
CDH13-207ENST00000565636 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
CDH13-207ENST00000565636 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
CDH13-207ENST00000565636 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
CDH13-207ENST00000565636 PHF12Q96QT6 1004 aa15.49■□□□□ 0.07
CDH13-207ENST00000565636 TSPYL2Q9H2G4 693 aaPredicted RBP15.47■□□□□ 0.07
CDH13-207ENST00000565636 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
CDH13-207ENST00000565636 GALR2O43603 387 aaPredicted RBP15.45■□□□□ 0.06
CDH13-207ENST00000565636 FBXO3Q9UK99 471 aa15.45■□□□□ 0.06
CDH13-207ENST00000565636 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
CDH13-207ENST00000565636 LHX8Q68G74 356 aa15.43■□□□□ 0.06
CDH13-207ENST00000565636 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
CDH13-207ENST00000565636 DNMBPQ6XZF7 1577 aa15.37■□□□□ 0.05
CDH13-207ENST00000565636 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
CDH13-207ENST00000565636 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
CDH13-207ENST00000565636 RIMBP3CA6NJZ7 1639 aa15.33■□□□□ 0.04
CDH13-207ENST00000565636 RIMBP3BA6NNM3 1639 aa15.33■□□□□ 0.04
CDH13-207ENST00000565636 RIMBP3Q9UFD9 1639 aa15.33■□□□□ 0.04
CDH13-207ENST00000565636 MS4A3Q96HJ5 214 aa15.31■□□□□ 0.04
CDH13-207ENST00000565636 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
CDH13-207ENST00000565636 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
CDH13-207ENST00000565636 EIF4G3O43432 1585 aaKnown RBP15.29■□□□□ 0.04
CDH13-207ENST00000565636 RASEFQ8IZ41 740 aa15.29■□□□□ 0.04
CDH13-207ENST00000565636 ARHGEF11O15085 1522 aa15.27■□□□□ 0.04
CDH13-207ENST00000565636 KIF12Q96FN5 646 aa15.25■□□□□ 0.03
CDH13-207ENST00000565636 FAM212AQ96EL1 285 aa15.24■□□□□ 0.03
CDH13-207ENST00000565636 CHD1O14646 1710 aa15.23■□□□□ 0.03
CDH13-207ENST00000565636 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
CDH13-207ENST00000565636 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDH13-207ENST00000565636 NUBP1P53384 320 aa15.2■□□□□ 0.02
CDH13-207ENST00000565636 SOGA1O94964 1423 aa15.19■□□□□ 0.02
CDH13-207ENST00000565636 ASTLQ6HA08 431 aaPredicted RBP15.19■□□□□ 0.02
CDH13-207ENST00000565636 MAP3K13O43283 966 aa15.16■□□□□ 0.02
CDH13-207ENST00000565636 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
CDH13-207ENST00000565636 CYB5RLQ6IPT4 315 aa15.15■□□□□ 0.02
CDH13-207ENST00000565636 SLC39A7Q92504 469 aa15.15■□□□□ 0.02
CDH13-207ENST00000565636 SGIP1Q9BQI5 828 aa15.15■□□□□ 0.02
CDH13-207ENST00000565636 KLHL34Q8N239 644 aa15.14■□□□□ 0.01
CDH13-207ENST00000565636 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
CDH13-207ENST00000565636 C7P10643 843 aa15.13■□□□□ 0.01
CDH13-207ENST00000565636 VASPP50552 380 aaPredicted RBP15.13■□□□□ 0.01
CDH13-207ENST00000565636 PCDHB13Q9Y5F0 798 aa15.1■□□□□ 0.01
CDH13-207ENST00000565636 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
CDH13-207ENST00000565636 FGD5Q6ZNL6 1462 aa15.09■□□□□ 0.01
CDH13-207ENST00000565636 RAD54L2Q9Y4B4 1467 aa15.09■□□□□ 0.01
CDH13-207ENST00000565636 TIE1P35590 1138 aa15.09■□□□□ 0.01
CDH13-207ENST00000565636 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
CDH13-207ENST00000565636 METRNQ9UJH8 293 aa15.09■□□□□ 0.01
CDH13-207ENST00000565636 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
CDH13-207ENST00000565636 TDRD9Q8NDG6 1382 aaKnown RBP15.09■□□□□ 0.01
CDH13-207ENST00000565636 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
CDH13-207ENST00000565636 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
CDH13-207ENST00000565636 ARAP1Q96P48 1450 aa15.08■□□□□ 0
CDH13-207ENST00000565636 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
CDH13-207ENST00000565636 SYNJ2O15056 1496 aa15.06■□□□□ 0
CDH13-207ENST00000565636 CUX1P39880 1505 aa15.06■□□□□ 0
CDH13-207ENST00000565636 SNAPC4Q5SXM2 1469 aa15.04■□□□□ -0
CDH13-207ENST00000565636 ATN1P54259 1190 aaPredicted RBP15.04■□□□□ -0
CDH13-207ENST00000565636 BMP2KQ9NSY1 1161 aaPredicted RBP15.03■□□□□ -0
CDH13-207ENST00000565636 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
CDH13-207ENST00000565636 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
CDH13-207ENST00000565636 PBRM1Q86U86 1689 aa15□□□□□ -0.01
CDH13-207ENST00000565636 GSE1Q14687 1217 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms