RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 AEBP2Q6ZN18 517 aaPredicted RBP30.88■■■□□ 2.53
CDH13-207ENST00000565636 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
CDH13-207ENST00000565636 SENP3Q9H4L4 574 aaPredicted RBP26.55■■□□□ 1.84
CDH13-207ENST00000565636 PHF23Q9BUL5 403 aaPredicted RBP26.14■■□□□ 1.78
CDH13-207ENST00000565636 FOXD1Q16676 465 aa24.58■■□□□ 1.53
CDH13-207ENST00000565636 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
CDH13-207ENST00000565636 MSH5O43196 834 aa23.12■■□□□ 1.29
CDH13-207ENST00000565636 PIAS4Q8N2W9 510 aaPredicted RBP23.1■■□□□ 1.29
CDH13-207ENST00000565636 ADRA2BP18089 450 aa23.01■■□□□ 1.27
CDH13-207ENST00000565636 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
CDH13-207ENST00000565636 POTEDQ86YR6 584 aa22.17■■□□□ 1.14
CDH13-207ENST00000565636 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
CDH13-207ENST00000565636 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
CDH13-207ENST00000565636 DMRT2Q9Y5R5 561 aa21.01■□□□□ 0.95
CDH13-207ENST00000565636 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
CDH13-207ENST00000565636 PPP4R3CPQ6ZMV5 832 aa20.82■□□□□ 0.92
CDH13-207ENST00000565636 CNKSR2Q8WXI2 1034 aa20.45■□□□□ 0.86
CDH13-207ENST00000565636 HOXD11P31277 338 aaPredicted RBP20.28■□□□□ 0.84
CDH13-207ENST00000565636 NCBP3Q53F19 620 aaKnown RBP20.23■□□□□ 0.83
CDH13-207ENST00000565636 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
CDH13-207ENST00000565636 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
CDH13-207ENST00000565636 NPM3O75607 178 aaKnown RBP19.73■□□□□ 0.75
CDH13-207ENST00000565636 CACNB1Q02641 598 aaPredicted RBP19.73■□□□□ 0.75
CDH13-207ENST00000565636 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
CDH13-207ENST00000565636 RNF39Q9H2S5 420 aa19.63■□□□□ 0.73
CDH13-207ENST00000565636 C1QBPQ07021 282 aaKnown RBP19.46■□□□□ 0.71
CDH13-207ENST00000565636 KCNA4P22459 653 aa19.45■□□□□ 0.7
CDH13-207ENST00000565636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDH13-207ENST00000565636 CCDC180Q9P1Z9 1646 aa18.91■□□□□ 0.62
CDH13-207ENST00000565636 U3KPZ7 1027 aaPredicted RBP18.9■□□□□ 0.62
CDH13-207ENST00000565636 ABCC9O60706 1549 aa18.75■□□□□ 0.59
CDH13-207ENST00000565636 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
CDH13-207ENST00000565636 APLP2Q06481 763 aa18.68■□□□□ 0.58
CDH13-207ENST00000565636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
CDH13-207ENST00000565636 CAPN15O75808 1086 aa18.66■□□□□ 0.58
CDH13-207ENST00000565636 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
CDH13-207ENST00000565636 SPINK5Q9NQ38 1064 aaPredicted RBP18.56■□□□□ 0.56
CDH13-207ENST00000565636 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
CDH13-207ENST00000565636 SLC4A1APQ9BWU0 796 aaKnown RBP18.5■□□□□ 0.55
CDH13-207ENST00000565636 DSG3P32926 999 aa18.42■□□□□ 0.54
CDH13-207ENST00000565636 ZNF219Q9P2Y4 722 aaPredicted RBP18.42■□□□□ 0.54
CDH13-207ENST00000565636 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
CDH13-207ENST00000565636 MYCNP04198 464 aaPredicted RBP18.35■□□□□ 0.53
CDH13-207ENST00000565636 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
CDH13-207ENST00000565636 ABCB7O75027 752 aa18.15■□□□□ 0.5
CDH13-207ENST00000565636 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
CDH13-207ENST00000565636 NACADO15069 1562 aa17.9■□□□□ 0.46
CDH13-207ENST00000565636 POLA2Q14181 598 aa17.89■□□□□ 0.45
CDH13-207ENST00000565636 ZBTB22O15209 634 aa17.79■□□□□ 0.44
CDH13-207ENST00000565636 RBM42Q9BTD8 480 aaKnown RBP17.76■□□□□ 0.43
CDH13-207ENST00000565636 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
CDH13-207ENST00000565636 ATF5Q9Y2D1 282 aaPredicted RBP17.71■□□□□ 0.43
CDH13-207ENST00000565636 ZBTB12Q9Y330 459 aaPredicted RBP17.7■□□□□ 0.42
CDH13-207ENST00000565636 ATXN8OSP0DMR3 200 aa17.69■□□□□ 0.42
CDH13-207ENST00000565636 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
CDH13-207ENST00000565636 DCAF8L2P0C7V8 631 aa17.52■□□□□ 0.4
CDH13-207ENST00000565636 POTEHQ6S545 545 aa17.46■□□□□ 0.39
CDH13-207ENST00000565636 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDH13-207ENST00000565636 DCAF1Q9Y4B6 1507 aa17.41■□□□□ 0.38
CDH13-207ENST00000565636 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
CDH13-207ENST00000565636 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
CDH13-207ENST00000565636 FBLN2P98095 1184 aa17.3■□□□□ 0.36
CDH13-207ENST00000565636 AKT1S1Q96B36 256 aa17.3■□□□□ 0.36
CDH13-207ENST00000565636 ZCCHC6Q5VYS8 1495 aaKnown RBP17.27■□□□□ 0.36
CDH13-207ENST00000565636 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
CDH13-207ENST00000565636 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
CDH13-207ENST00000565636 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
CDH13-207ENST00000565636 EHMT2Q96KQ7 1210 aa17.09■□□□□ 0.33
CDH13-207ENST00000565636 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
CDH13-207ENST00000565636 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
CDH13-207ENST00000565636 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
CDH13-207ENST00000565636 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
CDH13-207ENST00000565636 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
CDH13-207ENST00000565636 EIF4G1Q04637 1599 aaKnown RBP16.99■□□□□ 0.31
CDH13-207ENST00000565636 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
CDH13-207ENST00000565636 SCRIBQ14160 1630 aa16.96■□□□□ 0.31
CDH13-207ENST00000565636 MKRN4PQ13434 485 aaPredicted RBP16.93■□□□□ 0.3
CDH13-207ENST00000565636 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
CDH13-207ENST00000565636 PITPNM1O00562 1244 aa16.86■□□□□ 0.29
CDH13-207ENST00000565636 SPDYE1Q8NFV5 336 aaPredicted RBP16.77■□□□□ 0.28
CDH13-207ENST00000565636 SSUH2Q9Y2M2 353 aa16.77■□□□□ 0.28
CDH13-207ENST00000565636 PIP4P2Q8N4L2 257 aa16.76■□□□□ 0.27
CDH13-207ENST00000565636 FXR2P51116 673 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDH13-207ENST00000565636 CLEC11AQ9Y240 323 aa16.7■□□□□ 0.26
CDH13-207ENST00000565636 HAX1O00165 279 aa16.52■□□□□ 0.24
CDH13-207ENST00000565636 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
CDH13-207ENST00000565636 DNAJC5Q9H3Z4 198 aa16.5■□□□□ 0.23
CDH13-207ENST00000565636 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
CDH13-207ENST00000565636 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
CDH13-207ENST00000565636 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
CDH13-207ENST00000565636 CUX2O14529 1486 aa16.41■□□□□ 0.22
CDH13-207ENST00000565636 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
CDH13-207ENST00000565636 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
CDH13-207ENST00000565636 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
CDH13-207ENST00000565636 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
CDH13-207ENST00000565636 STAG3Q9UJ98 1225 aa16.31■□□□□ 0.2
CDH13-207ENST00000565636 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
CDH13-207ENST00000565636 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
CDH13-207ENST00000565636 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
CDH13-207ENST00000565636 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms