RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 MAPKBP1O60336 1514 aa22.41■■□□□ 1.18
GTF3C1-205ENST00000564747 ATP1B4Q9UN42 357 aaPredicted RBP22.4■■□□□ 1.18
GTF3C1-205ENST00000564747 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
GTF3C1-205ENST00000564747 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.18
GTF3C1-205ENST00000564747 SETD5Q9C0A6 1442 aa22.39■■□□□ 1.18
GTF3C1-205ENST00000564747 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
GTF3C1-205ENST00000564747 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
GTF3C1-205ENST00000564747 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
GTF3C1-205ENST00000564747 PCF11O94913 1555 aaKnown RBP22.34■■□□□ 1.17
GTF3C1-205ENST00000564747 FHOD3Q2V2M9 1422 aa22.32■■□□□ 1.16
GTF3C1-205ENST00000564747 SIN3AQ96ST3 1273 aa22.32■■□□□ 1.16
GTF3C1-205ENST00000564747 CFAP43Q8NDM7 1665 aa22.29■■□□□ 1.16
GTF3C1-205ENST00000564747 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
GTF3C1-205ENST00000564747 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
GTF3C1-205ENST00000564747 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
GTF3C1-205ENST00000564747 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
GTF3C1-205ENST00000564747 NESP48681 1621 aa22.24■■□□□ 1.15
GTF3C1-205ENST00000564747 KCNH8Q96L42 1107 aa22.24■■□□□ 1.15
GTF3C1-205ENST00000564747 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
GTF3C1-205ENST00000564747 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
GTF3C1-205ENST00000564747 CASKIN1Q8WXD9 1431 aa22.21■■□□□ 1.15
GTF3C1-205ENST00000564747 SUPT16HQ9Y5B9 1047 aaKnown RBP22.21■■□□□ 1.15
GTF3C1-205ENST00000564747 EFCAB5A4FU69 1503 aa22.19■■□□□ 1.14
GTF3C1-205ENST00000564747 DDX10Q13206 875 aaKnown RBP22.16■■□□□ 1.14
GTF3C1-205ENST00000564747 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.14
GTF3C1-205ENST00000564747 CUL7Q14999 1698 aa22.15■■□□□ 1.14
GTF3C1-205ENST00000564747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.13■■□□□ 1.13
GTF3C1-205ENST00000564747 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
GTF3C1-205ENST00000564747 TIMELESSQ9UNS1 1208 aa22.11■■□□□ 1.13
GTF3C1-205ENST00000564747 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
GTF3C1-205ENST00000564747 HIRIP3Q9BW71 556 aaPredicted RBP22.1■■□□□ 1.13
GTF3C1-205ENST00000564747 PPP1R15AO75807 674 aaPredicted RBP22.1■■□□□ 1.13
GTF3C1-205ENST00000564747 FGD6Q6ZV73 1430 aa22.09■■□□□ 1.13
GTF3C1-205ENST00000564747 TDRD9Q8NDG6 1382 aaKnown RBP22.09■■□□□ 1.13
GTF3C1-205ENST00000564747 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
GTF3C1-205ENST00000564747 URB2Q14146 1524 aaKnown RBP22.07■■□□□ 1.12
GTF3C1-205ENST00000564747 MTUS2Q5JR59 1369 aa22.07■■□□□ 1.12
GTF3C1-205ENST00000564747 PTPRKQ15262 1439 aa22.03■■□□□ 1.12
GTF3C1-205ENST00000564747 CCDC18Q5T9S5 1454 aa21.99■■□□□ 1.11
GTF3C1-205ENST00000564747 GAPVD1Q14C86 1478 aa21.98■■□□□ 1.11
GTF3C1-205ENST00000564747 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
GTF3C1-205ENST00000564747 SAMD9Q5K651 1589 aa21.97■■□□□ 1.11
GTF3C1-205ENST00000564747 LRRIQ1Q96JM4 1722 aa21.97■■□□□ 1.11
GTF3C1-205ENST00000564747 ABCA5Q8WWZ7 1642 aa21.97■■□□□ 1.11
GTF3C1-205ENST00000564747 HFM1A2PYH4 1435 aa21.96■■□□□ 1.11
GTF3C1-205ENST00000564747 NCOA2Q15596 1464 aa21.96■■□□□ 1.11
GTF3C1-205ENST00000564747 TONSLQ96HA7 1378 aa21.95■■□□□ 1.11
GTF3C1-205ENST00000564747 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
GTF3C1-205ENST00000564747 UACAQ9BZF9 1416 aa21.94■■□□□ 1.1
GTF3C1-205ENST00000564747 MYOM3Q5VTT5 1437 aa21.93■■□□□ 1.1
GTF3C1-205ENST00000564747 PTPN23Q9H3S7 1636 aa21.93■■□□□ 1.1
GTF3C1-205ENST00000564747 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
GTF3C1-205ENST00000564747 NAIPQ13075 1403 aa21.92■■□□□ 1.1
GTF3C1-205ENST00000564747 ANP32CO43423 234 aa21.89■■□□□ 1.09
GTF3C1-205ENST00000564747 PDS5BQ9NTI5 1447 aa21.88■■□□□ 1.09
GTF3C1-205ENST00000564747 CCER2I3L3R5 266 aa21.86■■□□□ 1.09
GTF3C1-205ENST00000564747 SUPT6HQ7KZ85 1726 aaKnown RBP21.86■■□□□ 1.09
GTF3C1-205ENST00000564747 TSHZ2Q9NRE2 1034 aa21.85■■□□□ 1.09
GTF3C1-205ENST00000564747 BCANQ96GW7 911 aa21.85■■□□□ 1.09
GTF3C1-205ENST00000564747 EHBP1L1Q8N3D4 1523 aa21.84■■□□□ 1.09
GTF3C1-205ENST00000564747 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
GTF3C1-205ENST00000564747 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
GTF3C1-205ENST00000564747 RRP7BPQ9NSQ0 103 aa21.83■■□□□ 1.09
GTF3C1-205ENST00000564747 CHIC2Q9UKJ5 165 aa21.83■■□□□ 1.09
GTF3C1-205ENST00000564747 MAGI3Q5TCQ9 1506 aa21.83■■□□□ 1.09
GTF3C1-205ENST00000564747 FKBP8Q14318 412 aa21.83■■□□□ 1.08
GTF3C1-205ENST00000564747 UGGT2Q9NYU1 1516 aa21.82■■□□□ 1.08
GTF3C1-205ENST00000564747 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
GTF3C1-205ENST00000564747 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
GTF3C1-205ENST00000564747 TARBP1Q13395 1621 aaKnown RBP21.77■■□□□ 1.08
GTF3C1-205ENST00000564747 KDM5BQ9UGL1 1544 aa21.76■■□□□ 1.07
GTF3C1-205ENST00000564747 ARID3CA6NKF2 412 aa21.74■■□□□ 1.07
GTF3C1-205ENST00000564747 TCOF1Q13428 1488 aaKnown RBP21.72■■□□□ 1.07
GTF3C1-205ENST00000564747 DENND4BO75064 1496 aaPredicted RBP21.7■■□□□ 1.07
GTF3C1-205ENST00000564747 EPRSP07814 1512 aaKnown RBP21.7■■□□□ 1.06
GTF3C1-205ENST00000564747 HECW1Q76N89 1606 aa21.69■■□□□ 1.06
GTF3C1-205ENST00000564747 CDK13Q14004 1512 aaKnown RBP21.68■■□□□ 1.06
GTF3C1-205ENST00000564747 IQGAP2Q13576 1575 aa21.68■■□□□ 1.06
GTF3C1-205ENST00000564747 KDM6BO15054 1643 aa21.68■■□□□ 1.06
GTF3C1-205ENST00000564747 NEFLP07196 543 aa21.67■■□□□ 1.06
GTF3C1-205ENST00000564747 HSPA5P11021 654 aaKnown RBP21.67■■□□□ 1.06
GTF3C1-205ENST00000564747 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
GTF3C1-205ENST00000564747 MPHOSPH9Q99550 1183 aa21.65■■□□□ 1.06
GTF3C1-205ENST00000564747 GCC2Q8IWJ2 1684 aa21.65■■□□□ 1.06
GTF3C1-205ENST00000564747 WASHC2AQ641Q2 1341 aa21.65■■□□□ 1.06
GTF3C1-205ENST00000564747 FOXD1Q16676 465 aa21.63■■□□□ 1.05
GTF3C1-205ENST00000564747 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
GTF3C1-205ENST00000564747 AKNAQ7Z591 1439 aa21.62■■□□□ 1.05
GTF3C1-205ENST00000564747 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
GTF3C1-205ENST00000564747 WDR62O43379 1518 aa21.6■■□□□ 1.05
GTF3C1-205ENST00000564747 L3MBTL2Q969R5 705 aa21.59■■□□□ 1.05
GTF3C1-205ENST00000564747 EIF4G2P78344 907 aaKnown RBP eCLIP21.59■■□□□ 1.05
GTF3C1-205ENST00000564747 ANP32EQ9BTT0 268 aa21.59■■□□□ 1.05
GTF3C1-205ENST00000564747 HNRNPUQ00839 825 aaKnown RBP eCLIP21.57■■□□□ 1.04
GTF3C1-205ENST00000564747 ZNF644Q9H582 1327 aaPredicted RBP21.54■■□□□ 1.04
GTF3C1-205ENST00000564747 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
GTF3C1-205ENST00000564747 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
GTF3C1-205ENST00000564747 DAPK1P53355 1430 aa21.51■■□□□ 1.03
GTF3C1-205ENST00000564747 ZNF608Q9ULD9 1512 aaPredicted RBP21.51■■□□□ 1.03
GTF3C1-205ENST00000564747 ANKRD30BQ9BXX2 1392 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms