RNA–Protein interactions for RNA: ENST00000564037.1

GBP3-209, Transcript of guanylate binding protein 3, humanhuman

TSL 3

Gene GBP3, Length 512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-209ENST00000564037 CSRNP3Q8WYN3 585 aa12.78□□□□□ -0.36
GBP3-209ENST00000564037 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.37
GBP3-209ENST00000564037 ABCC10Q5T3U5 1492 aa12.77□□□□□ -0.37
GBP3-209ENST00000564037 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
GBP3-209ENST00000564037 TOP2BQ02880 1626 aa12.73□□□□□ -0.37
GBP3-209ENST00000564037 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
GBP3-209ENST00000564037 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
GBP3-209ENST00000564037 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
GBP3-209ENST00000564037 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
GBP3-209ENST00000564037 ERICH3Q5RHP9 1530 aa12.69□□□□□ -0.38
GBP3-209ENST00000564037 UBTFP17480 764 aaKnown RBP12.69□□□□□ -0.38
GBP3-209ENST00000564037 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
GBP3-209ENST00000564037 TSPOAP1O95153 1857 aa12.69□□□□□ -0.38
GBP3-209ENST00000564037 SOGA1O94964 1423 aa12.69□□□□□ -0.38
GBP3-209ENST00000564037 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
GBP3-209ENST00000564037 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
GBP3-209ENST00000564037 APLP2Q06481 763 aa12.64□□□□□ -0.39
GBP3-209ENST00000564037 CCER1Q8TC90 406 aaPredicted RBP12.64□□□□□ -0.39
GBP3-209ENST00000564037 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
GBP3-209ENST00000564037 MAGI1Q96QZ7 1491 aaPredicted RBP12.63□□□□□ -0.39
GBP3-209ENST00000564037 CLIP1P30622 1438 aa12.62□□□□□ -0.39
GBP3-209ENST00000564037 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
GBP3-209ENST00000564037 EHMT2Q96KQ7 1210 aa12.61□□□□□ -0.39
GBP3-209ENST00000564037 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
GBP3-209ENST00000564037 MAPKBP1O60336 1514 aa12.6□□□□□ -0.39
GBP3-209ENST00000564037 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
GBP3-209ENST00000564037 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
GBP3-209ENST00000564037 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
GBP3-209ENST00000564037 RUSC2Q8N2Y8 1516 aa12.53□□□□□ -0.4
GBP3-209ENST00000564037 CEP170Q5SW79 1584 aa12.53□□□□□ -0.4
GBP3-209ENST00000564037 WDR97A6NE52 1622 aa12.53□□□□□ -0.4
GBP3-209ENST00000564037 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
GBP3-209ENST00000564037 GRIN2BQ13224 1484 aa12.49□□□□□ -0.41
GBP3-209ENST00000564037 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
GBP3-209ENST00000564037 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
GBP3-209ENST00000564037 PELP1Q8IZL8 1130 aaKnown RBP12.48□□□□□ -0.41
GBP3-209ENST00000564037 RAPGEF2Q9Y4G8 1499 aa12.47□□□□□ -0.41
GBP3-209ENST00000564037 PCF11O94913 1555 aaKnown RBP12.47□□□□□ -0.41
GBP3-209ENST00000564037 RAD54L2Q9Y4B4 1467 aa12.46□□□□□ -0.41
GBP3-209ENST00000564037 CENPBP07199 599 aaPredicted RBP12.45□□□□□ -0.42
GBP3-209ENST00000564037 CUX1P39880 1505 aa12.44□□□□□ -0.42
GBP3-209ENST00000564037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
GBP3-209ENST00000564037 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
GBP3-209ENST00000564037 COL17A1Q9UMD9 1497 aaPredicted RBP12.4□□□□□ -0.42
GBP3-209ENST00000564037 MAP3K1Q13233 1512 aa12.4□□□□□ -0.42
GBP3-209ENST00000564037 PPRC1Q5VV67 1664 aaKnown RBP12.39□□□□□ -0.43
GBP3-209ENST00000564037 PTPRMP28827 1452 aa12.38□□□□□ -0.43
GBP3-209ENST00000564037 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
GBP3-209ENST00000564037 ADCY10Q96PN6 1610 aa12.35□□□□□ -0.43
GBP3-209ENST00000564037 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
GBP3-209ENST00000564037 CUL7Q14999 1698 aa12.34□□□□□ -0.43
GBP3-209ENST00000564037 FHAD1B1AJZ9 1412 aa12.34□□□□□ -0.43
GBP3-209ENST00000564037 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
GBP3-209ENST00000564037 NUP160Q12769 1436 aa12.32□□□□□ -0.44
GBP3-209ENST00000564037 PRG4Q92954 1404 aaPredicted RBP12.32□□□□□ -0.44
GBP3-209ENST00000564037 GRIN2AQ12879 1464 aa12.32□□□□□ -0.44
GBP3-209ENST00000564037 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
GBP3-209ENST00000564037 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
GBP3-209ENST00000564037 HSPA2P54652 639 aa12.3□□□□□ -0.44
GBP3-209ENST00000564037 GLI2P10070 1586 aa12.29□□□□□ -0.44
GBP3-209ENST00000564037 TTBK1Q5TCY1 1321 aaPredicted RBP12.28□□□□□ -0.44
GBP3-209ENST00000564037 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.44
GBP3-209ENST00000564037 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.45
GBP3-209ENST00000564037 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
GBP3-209ENST00000564037 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
GBP3-209ENST00000564037 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
GBP3-209ENST00000564037 ADAMTSL3P82987 1691 aa12.24□□□□□ -0.45
GBP3-209ENST00000564037 HNRNPUL2Q1KMD3 747 aaKnown RBP12.24□□□□□ -0.45
GBP3-209ENST00000564037 CARMIL1Q5VZK9 1371 aa12.24□□□□□ -0.45
GBP3-209ENST00000564037 CTTNBP2Q8WZ74 1663 aa12.24□□□□□ -0.45
GBP3-209ENST00000564037 ABCA10Q8WWZ4 1543 aa12.23□□□□□ -0.45
GBP3-209ENST00000564037 CCNB3Q8WWL7 1395 aa12.23□□□□□ -0.45
GBP3-209ENST00000564037 ACIN1Q9UKV3 1341 aaKnown RBP12.22□□□□□ -0.45
GBP3-209ENST00000564037 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
GBP3-209ENST00000564037 JPH4Q96JJ6 628 aa12.21□□□□□ -0.45
GBP3-209ENST00000564037 FYCO1Q9BQS8 1478 aa12.21□□□□□ -0.46
GBP3-209ENST00000564037 IGF1RP08069 1367 aa12.2□□□□□ -0.46
GBP3-209ENST00000564037 PLB1Q6P1J6 1458 aa12.19□□□□□ -0.46
GBP3-209ENST00000564037 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
GBP3-209ENST00000564037 MAP3K4Q9Y6R4 1608 aa12.18□□□□□ -0.46
GBP3-209ENST00000564037 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
GBP3-209ENST00000564037 FMN1Q68DA7 1419 aa12.17□□□□□ -0.46
GBP3-209ENST00000564037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.17□□□□□ -0.46
GBP3-209ENST00000564037 IQSEC2Q5JU85 1478 aa12.16□□□□□ -0.46
GBP3-209ENST00000564037 ASXL2Q76L83 1435 aa12.16□□□□□ -0.46
GBP3-209ENST00000564037 LRRC9Q6ZRR7 1453 aa12.14□□□□□ -0.47
GBP3-209ENST00000564037 DHX57Q6P158 1386 aaKnown RBP12.14□□□□□ -0.47
GBP3-209ENST00000564037 KIAA0586Q9BVV6 1533 aa12.13□□□□□ -0.47
GBP3-209ENST00000564037 RANGAP1P46060 587 aaPredicted RBP12.13□□□□□ -0.47
GBP3-209ENST00000564037 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
GBP3-209ENST00000564037 MADDQ8WXG6 1647 aa12.12□□□□□ -0.47
GBP3-209ENST00000564037 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
GBP3-209ENST00000564037 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
GBP3-209ENST00000564037 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
GBP3-209ENST00000564037 ADRA2BP18089 450 aa12.1□□□□□ -0.47
GBP3-209ENST00000564037 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
GBP3-209ENST00000564037 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
GBP3-209ENST00000564037 SETD5Q9C0A6 1442 aa12.08□□□□□ -0.48
GBP3-209ENST00000564037 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
GBP3-209ENST00000564037 EPRSP07814 1512 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms