RNA–Protein interactions for RNA: ENST00000563079.1

LINC02533-201, Transcript of long intergenic non-protein coding RNA 2533, humanhuman

TSL 4 BASIC

Gene LINC02533, Length 2,272 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02533-201ENST00000563079 SPDYE2Q495Y8 402 aa14.01□□□□□ -0.17
LINC02533-201ENST00000563079 CUX2O14529 1486 aa14□□□□□ -0.17
LINC02533-201ENST00000563079 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
LINC02533-201ENST00000563079 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
LINC02533-201ENST00000563079 ERICH6Q7L0X2 663 aa13.94□□□□□ -0.18
LINC02533-201ENST00000563079 FAM9AQ8IZU1 332 aaPredicted RBP13.94□□□□□ -0.18
LINC02533-201ENST00000563079 WRNQ14191 1432 aaPredicted RBP eCLIP13.89□□□□□ -0.19
LINC02533-201ENST00000563079 BCL11AQ9H165 835 aa13.88□□□□□ -0.19
LINC02533-201ENST00000563079 ACIN1Q9UKV3 1341 aaKnown RBP13.87□□□□□ -0.19
LINC02533-201ENST00000563079 ERCC6Q03468 1493 aa13.84□□□□□ -0.19
LINC02533-201ENST00000563079 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
LINC02533-201ENST00000563079 CFTRP13569 1480 aa13.84□□□□□ -0.19
LINC02533-201ENST00000563079 CADPSQ9ULU8 1353 aa13.82□□□□□ -0.2
LINC02533-201ENST00000563079 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
LINC02533-201ENST00000563079 CCER1Q8TC90 406 aaPredicted RBP13.78□□□□□ -0.2
LINC02533-201ENST00000563079 NESP48681 1621 aa13.77□□□□□ -0.21
LINC02533-201ENST00000563079 NEUROD1Q13562 356 aa13.75□□□□□ -0.21
LINC02533-201ENST00000563079 LAMC3Q9Y6N6 1575 aa13.74□□□□□ -0.21
LINC02533-201ENST00000563079 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
LINC02533-201ENST00000563079 TNIKQ9UKE5 1360 aa13.73□□□□□ -0.21
LINC02533-201ENST00000563079 DIEXFQ68CQ4 756 aaKnown RBP13.73□□□□□ -0.21
LINC02533-201ENST00000563079 EEA1Q15075 1411 aa13.72□□□□□ -0.21
LINC02533-201ENST00000563079 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
LINC02533-201ENST00000563079 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
LINC02533-201ENST00000563079 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
LINC02533-201ENST00000563079 SLC24A1O60721 1099 aa13.69□□□□□ -0.22
LINC02533-201ENST00000563079 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
LINC02533-201ENST00000563079 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
LINC02533-201ENST00000563079 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
LINC02533-201ENST00000563079 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
LINC02533-201ENST00000563079 PDS5BQ9NTI5 1447 aa13.63□□□□□ -0.23
LINC02533-201ENST00000563079 GTF3C3Q9Y5Q9 886 aa13.63□□□□□ -0.23
LINC02533-201ENST00000563079 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
LINC02533-201ENST00000563079 STAG3Q9UJ98 1225 aa13.6□□□□□ -0.23
LINC02533-201ENST00000563079 KIF21AQ7Z4S6 1674 aa13.58□□□□□ -0.24
LINC02533-201ENST00000563079 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
LINC02533-201ENST00000563079 SYNJ1O43426 1573 aa13.58□□□□□ -0.24
LINC02533-201ENST00000563079 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
LINC02533-201ENST00000563079 SOGA1O94964 1423 aa13.57□□□□□ -0.24
LINC02533-201ENST00000563079 RTN4Q9NQC3 1192 aaKnown RBP13.57□□□□□ -0.24
LINC02533-201ENST00000563079 CUX1P39880 1505 aa13.56□□□□□ -0.24
LINC02533-201ENST00000563079 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
LINC02533-201ENST00000563079 IFNLR1Q8IU57 520 aaPredicted RBP13.55□□□□□ -0.24
LINC02533-201ENST00000563079 TOP2BQ02880 1626 aa13.54□□□□□ -0.24
LINC02533-201ENST00000563079 AMER1Q5JTC6 1135 aaPredicted RBP13.54□□□□□ -0.24
LINC02533-201ENST00000563079 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
LINC02533-201ENST00000563079 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
LINC02533-201ENST00000563079 URB2Q14146 1524 aaKnown RBP13.51□□□□□ -0.25
LINC02533-201ENST00000563079 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
LINC02533-201ENST00000563079 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
LINC02533-201ENST00000563079 KIF21BO75037 1637 aa13.48□□□□□ -0.25
LINC02533-201ENST00000563079 MRC2Q9UBG0 1479 aa13.48□□□□□ -0.25
LINC02533-201ENST00000563079 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
LINC02533-201ENST00000563079 CLEC11AQ9Y240 323 aa13.47□□□□□ -0.25
LINC02533-201ENST00000563079 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
LINC02533-201ENST00000563079 MIER1Q8N108 512 aa13.44□□□□□ -0.26
LINC02533-201ENST00000563079 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
LINC02533-201ENST00000563079 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
LINC02533-201ENST00000563079 WDR62O43379 1518 aa13.42□□□□□ -0.26
LINC02533-201ENST00000563079 UBTFP17480 764 aaKnown RBP13.42□□□□□ -0.26
LINC02533-201ENST00000563079 POLA1P09884 1462 aaPredicted RBP13.41□□□□□ -0.26
LINC02533-201ENST00000563079 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
LINC02533-201ENST00000563079 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
LINC02533-201ENST00000563079 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
LINC02533-201ENST00000563079 CLIP1P30622 1438 aa13.37□□□□□ -0.27
LINC02533-201ENST00000563079 RAD54L2Q9Y4B4 1467 aa13.37□□□□□ -0.27
LINC02533-201ENST00000563079 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
LINC02533-201ENST00000563079 ABCA10Q8WWZ4 1543 aa13.33□□□□□ -0.28
LINC02533-201ENST00000563079 TARBP1Q13395 1621 aaKnown RBP13.32□□□□□ -0.28
LINC02533-201ENST00000563079 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
LINC02533-201ENST00000563079 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
LINC02533-201ENST00000563079 CREBZFQ9NS37 354 aa13.29□□□□□ -0.28
LINC02533-201ENST00000563079 WDR97A6NE52 1622 aa13.29□□□□□ -0.28
LINC02533-201ENST00000563079 KIF27Q86VH2 1401 aa13.29□□□□□ -0.28
LINC02533-201ENST00000563079 IFT140Q96RY7 1462 aa13.28□□□□□ -0.28
LINC02533-201ENST00000563079 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
LINC02533-201ENST00000563079 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
LINC02533-201ENST00000563079 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
LINC02533-201ENST00000563079 ANP32EQ9BTT0 268 aa13.24□□□□□ -0.29
LINC02533-201ENST00000563079 RAPGEF2Q9Y4G8 1499 aa13.24□□□□□ -0.29
LINC02533-201ENST00000563079 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
LINC02533-201ENST00000563079 IGF1RP08069 1367 aa13.23□□□□□ -0.29
LINC02533-201ENST00000563079 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
LINC02533-201ENST00000563079 ABCA5Q8WWZ7 1642 aa13.23□□□□□ -0.29
LINC02533-201ENST00000563079 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
LINC02533-201ENST00000563079 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
LINC02533-201ENST00000563079 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.3
LINC02533-201ENST00000563079 GAPVD1Q14C86 1478 aa13.21□□□□□ -0.3
LINC02533-201ENST00000563079 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
LINC02533-201ENST00000563079 PRXQ9BXM0 1461 aa13.18□□□□□ -0.3
LINC02533-201ENST00000563079 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
LINC02533-201ENST00000563079 PKD2Q13563 968 aa13.18□□□□□ -0.3
LINC02533-201ENST00000563079 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
LINC02533-201ENST00000563079 RIMBP3CA6NJZ7 1639 aa13.16□□□□□ -0.3
LINC02533-201ENST00000563079 RIMBP3BA6NNM3 1639 aa13.16□□□□□ -0.3
LINC02533-201ENST00000563079 RIMBP3Q9UFD9 1639 aa13.16□□□□□ -0.3
LINC02533-201ENST00000563079 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
LINC02533-201ENST00000563079 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
LINC02533-201ENST00000563079 ARAP1Q96P48 1450 aa13.15□□□□□ -0.3
LINC02533-201ENST00000563079 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms