RNA–Protein interactions for RNA: ENST00000562772.1

AP003071.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003071.2, Length 990 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.2-201ENST00000562772 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
AP003071.2-201ENST00000562772 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
AP003071.2-201ENST00000562772 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
AP003071.2-201ENST00000562772 FKBP8Q14318 412 aa13.64□□□□□ -0.23
AP003071.2-201ENST00000562772 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
AP003071.2-201ENST00000562772 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
AP003071.2-201ENST00000562772 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
AP003071.2-201ENST00000562772 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
AP003071.2-201ENST00000562772 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
AP003071.2-201ENST00000562772 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
AP003071.2-201ENST00000562772 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
AP003071.2-201ENST00000562772 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
AP003071.2-201ENST00000562772 ZNF608Q9ULD9 1512 aaPredicted RBP13.58□□□□□ -0.24
AP003071.2-201ENST00000562772 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
AP003071.2-201ENST00000562772 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
AP003071.2-201ENST00000562772 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
AP003071.2-201ENST00000562772 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
AP003071.2-201ENST00000562772 CUX1P39880 1505 aa13.52□□□□□ -0.25
AP003071.2-201ENST00000562772 SOGA1O94964 1423 aa13.51□□□□□ -0.25
AP003071.2-201ENST00000562772 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
AP003071.2-201ENST00000562772 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.25
AP003071.2-201ENST00000562772 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
AP003071.2-201ENST00000562772 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
AP003071.2-201ENST00000562772 PROM2Q8N271 834 aa13.43□□□□□ -0.26
AP003071.2-201ENST00000562772 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
AP003071.2-201ENST00000562772 CHD1O14646 1710 aa13.41□□□□□ -0.26
AP003071.2-201ENST00000562772 ABCA10Q8WWZ4 1543 aa13.4□□□□□ -0.26
AP003071.2-201ENST00000562772 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
AP003071.2-201ENST00000562772 BIVM-ERCC5R4GMW8 1640 aa13.39□□□□□ -0.27
AP003071.2-201ENST00000562772 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
AP003071.2-201ENST00000562772 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
AP003071.2-201ENST00000562772 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
AP003071.2-201ENST00000562772 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
AP003071.2-201ENST00000562772 AMER1Q5JTC6 1135 aaPredicted RBP13.37□□□□□ -0.27
AP003071.2-201ENST00000562772 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
AP003071.2-201ENST00000562772 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
AP003071.2-201ENST00000562772 ABCA5Q8WWZ7 1642 aa13.35□□□□□ -0.27
AP003071.2-201ENST00000562772 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
AP003071.2-201ENST00000562772 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
AP003071.2-201ENST00000562772 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
AP003071.2-201ENST00000562772 PBRM1Q86U86 1689 aa13.34□□□□□ -0.27
AP003071.2-201ENST00000562772 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
AP003071.2-201ENST00000562772 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
AP003071.2-201ENST00000562772 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
AP003071.2-201ENST00000562772 CHMP7Q8WUX9 453 aaPredicted RBP13.31□□□□□ -0.28
AP003071.2-201ENST00000562772 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
AP003071.2-201ENST00000562772 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
AP003071.2-201ENST00000562772 CLASP1Q7Z460 1538 aa13.28□□□□□ -0.28
AP003071.2-201ENST00000562772 ERICH3Q5RHP9 1530 aa13.24□□□□□ -0.29
AP003071.2-201ENST00000562772 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
AP003071.2-201ENST00000562772 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
AP003071.2-201ENST00000562772 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
AP003071.2-201ENST00000562772 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
AP003071.2-201ENST00000562772 GRIN2AQ12879 1464 aa13.21□□□□□ -0.3
AP003071.2-201ENST00000562772 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
AP003071.2-201ENST00000562772 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
AP003071.2-201ENST00000562772 CYB5RLQ6IPT4 315 aa13.18□□□□□ -0.3
AP003071.2-201ENST00000562772 NUP160Q12769 1436 aa13.18□□□□□ -0.3
AP003071.2-201ENST00000562772 CEP170Q5SW79 1584 aa13.14□□□□□ -0.31
AP003071.2-201ENST00000562772 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
AP003071.2-201ENST00000562772 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
AP003071.2-201ENST00000562772 STAG3Q9UJ98 1225 aa13.12□□□□□ -0.31
AP003071.2-201ENST00000562772 SHROOM2Q13796 1616 aa13.11□□□□□ -0.31
AP003071.2-201ENST00000562772 IGF1RP08069 1367 aa13.09□□□□□ -0.31
AP003071.2-201ENST00000562772 CUL7Q14999 1698 aa13.08□□□□□ -0.31
AP003071.2-201ENST00000562772 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
AP003071.2-201ENST00000562772 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
AP003071.2-201ENST00000562772 RUSC2Q8N2Y8 1516 aa13.03□□□□□ -0.32
AP003071.2-201ENST00000562772 ERCC6L2Q5T890 1561 aa13.03□□□□□ -0.32
AP003071.2-201ENST00000562772 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
AP003071.2-201ENST00000562772 KIAA0586Q9BVV6 1533 aa13.01□□□□□ -0.33
AP003071.2-201ENST00000562772 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
AP003071.2-201ENST00000562772 CARMIL1Q5VZK9 1371 aa13□□□□□ -0.33
AP003071.2-201ENST00000562772 FXR2P51116 673 aaKnown RBP eCLIP12.99□□□□□ -0.33
AP003071.2-201ENST00000562772 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
AP003071.2-201ENST00000562772 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
AP003071.2-201ENST00000562772 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
AP003071.2-201ENST00000562772 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
AP003071.2-201ENST00000562772 MIER1Q8N108 512 aa12.92□□□□□ -0.34
AP003071.2-201ENST00000562772 RAPGEF2Q9Y4G8 1499 aa12.91□□□□□ -0.34
AP003071.2-201ENST00000562772 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
AP003071.2-201ENST00000562772 IQGAP2Q13576 1575 aa12.89□□□□□ -0.35
AP003071.2-201ENST00000562772 PLCD3Q8N3E9 789 aa12.88□□□□□ -0.35
AP003071.2-201ENST00000562772 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
AP003071.2-201ENST00000562772 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
AP003071.2-201ENST00000562772 PRXQ9BXM0 1461 aa12.84□□□□□ -0.35
AP003071.2-201ENST00000562772 UGGT2Q9NYU1 1516 aa12.83□□□□□ -0.35
AP003071.2-201ENST00000562772 TNIKQ9UKE5 1360 aa12.83□□□□□ -0.36
AP003071.2-201ENST00000562772 PTPRGP23470 1445 aa12.83□□□□□ -0.36
AP003071.2-201ENST00000562772 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
AP003071.2-201ENST00000562772 ADCY10Q96PN6 1610 aa12.83□□□□□ -0.36
AP003071.2-201ENST00000562772 MAPKBP1O60336 1514 aa12.83□□□□□ -0.36
AP003071.2-201ENST00000562772 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
AP003071.2-201ENST00000562772 CTTNBP2Q8WZ74 1663 aa12.82□□□□□ -0.36
AP003071.2-201ENST00000562772 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
AP003071.2-201ENST00000562772 DISP1Q96F81 1524 aa12.81□□□□□ -0.36
AP003071.2-201ENST00000562772 EEA1Q15075 1411 aa12.79□□□□□ -0.36
AP003071.2-201ENST00000562772 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
AP003071.2-201ENST00000562772 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
AP003071.2-201ENST00000562772 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms