RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 MRC2Q9UBG0 1479 aa12.99□□□□□ -0.33
SNX29-201ENST00000562510 FKBP8Q14318 412 aa12.98□□□□□ -0.33
SNX29-201ENST00000562510 PITPNM1O00562 1244 aa12.94□□□□□ -0.34
SNX29-201ENST00000562510 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
SNX29-201ENST00000562510 WDR62O43379 1518 aa12.93□□□□□ -0.34
SNX29-201ENST00000562510 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
SNX29-201ENST00000562510 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
SNX29-201ENST00000562510 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
SNX29-201ENST00000562510 KIF21AQ7Z4S6 1674 aa12.9□□□□□ -0.34
SNX29-201ENST00000562510 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
SNX29-201ENST00000562510 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
SNX29-201ENST00000562510 CFTRP13569 1480 aa12.82□□□□□ -0.36
SNX29-201ENST00000562510 STAG3Q9UJ98 1225 aa12.77□□□□□ -0.37
SNX29-201ENST00000562510 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
SNX29-201ENST00000562510 PROM2Q8N271 834 aa12.76□□□□□ -0.37
SNX29-201ENST00000562510 POTEHQ6S545 545 aa12.72□□□□□ -0.37
SNX29-201ENST00000562510 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
SNX29-201ENST00000562510 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
SNX29-201ENST00000562510 FXR2P51116 673 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNX29-201ENST00000562510 IFT140Q96RY7 1462 aa12.66□□□□□ -0.38
SNX29-201ENST00000562510 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
SNX29-201ENST00000562510 CYB5RLQ6IPT4 315 aa12.63□□□□□ -0.39
SNX29-201ENST00000562510 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
SNX29-201ENST00000562510 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
SNX29-201ENST00000562510 RIMBP3CA6NJZ7 1639 aa12.61□□□□□ -0.39
SNX29-201ENST00000562510 RIMBP3BA6NNM3 1639 aa12.61□□□□□ -0.39
SNX29-201ENST00000562510 RIMBP3Q9UFD9 1639 aa12.61□□□□□ -0.39
SNX29-201ENST00000562510 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
SNX29-201ENST00000562510 ABCC8Q09428 1581 aa12.57□□□□□ -0.4
SNX29-201ENST00000562510 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
SNX29-201ENST00000562510 TOPBP1Q92547 1522 aa12.54□□□□□ -0.4
SNX29-201ENST00000562510 WRNQ14191 1432 aaPredicted RBP eCLIP12.53□□□□□ -0.4
SNX29-201ENST00000562510 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
SNX29-201ENST00000562510 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
SNX29-201ENST00000562510 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNX29-201ENST00000562510 MIER1Q8N108 512 aa12.49□□□□□ -0.41
SNX29-201ENST00000562510 ARAP1Q96P48 1450 aa12.48□□□□□ -0.41
SNX29-201ENST00000562510 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
SNX29-201ENST00000562510 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
SNX29-201ENST00000562510 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
SNX29-201ENST00000562510 EIF4G3O43432 1585 aaKnown RBP12.44□□□□□ -0.42
SNX29-201ENST00000562510 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
SNX29-201ENST00000562510 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
SNX29-201ENST00000562510 CUX1P39880 1505 aa12.43□□□□□ -0.42
SNX29-201ENST00000562510 TOP2BQ02880 1626 aa12.42□□□□□ -0.42
SNX29-201ENST00000562510 HAX1O00165 279 aa12.42□□□□□ -0.42
SNX29-201ENST00000562510 TARBP1Q13395 1621 aaKnown RBP12.4□□□□□ -0.42
SNX29-201ENST00000562510 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
SNX29-201ENST00000562510 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
SNX29-201ENST00000562510 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
SNX29-201ENST00000562510 TDRD9Q8NDG6 1382 aaKnown RBP12.4□□□□□ -0.42
SNX29-201ENST00000562510 SOGA1O94964 1423 aa12.39□□□□□ -0.43
SNX29-201ENST00000562510 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
SNX29-201ENST00000562510 NPM1P06748 294 aaKnown RBP eCLIP12.36□□□□□ -0.43
SNX29-201ENST00000562510 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
SNX29-201ENST00000562510 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
SNX29-201ENST00000562510 MAGI1Q96QZ7 1491 aaPredicted RBP12.33□□□□□ -0.44
SNX29-201ENST00000562510 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
SNX29-201ENST00000562510 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
SNX29-201ENST00000562510 CHD1O14646 1710 aa12.31□□□□□ -0.44
SNX29-201ENST00000562510 WDR97A6NE52 1622 aa12.31□□□□□ -0.44
SNX29-201ENST00000562510 GRIN2BQ13224 1484 aa12.31□□□□□ -0.44
SNX29-201ENST00000562510 FGD5Q6ZNL6 1462 aa12.31□□□□□ -0.44
SNX29-201ENST00000562510 EEA1Q15075 1411 aa12.3□□□□□ -0.44
SNX29-201ENST00000562510 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
SNX29-201ENST00000562510 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
SNX29-201ENST00000562510 SYNJ2O15056 1496 aa12.29□□□□□ -0.44
SNX29-201ENST00000562510 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
SNX29-201ENST00000562510 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
SNX29-201ENST00000562510 C19orf67A6NJJ6 358 aa12.27□□□□□ -0.45
SNX29-201ENST00000562510 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
SNX29-201ENST00000562510 GAPVD1Q14C86 1478 aa12.26□□□□□ -0.45
SNX29-201ENST00000562510 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
SNX29-201ENST00000562510 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
SNX29-201ENST00000562510 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
SNX29-201ENST00000562510 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.45
SNX29-201ENST00000562510 EVX2Q03828 476 aa12.21□□□□□ -0.45
SNX29-201ENST00000562510 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
SNX29-201ENST00000562510 IGF1RP08069 1367 aa12.17□□□□□ -0.46
SNX29-201ENST00000562510 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
SNX29-201ENST00000562510 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
SNX29-201ENST00000562510 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
SNX29-201ENST00000562510 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
SNX29-201ENST00000562510 PRXQ9BXM0 1461 aa12.13□□□□□ -0.47
SNX29-201ENST00000562510 NUP160Q12769 1436 aa12.12□□□□□ -0.47
SNX29-201ENST00000562510 GRIN2AQ12879 1464 aa12.12□□□□□ -0.47
SNX29-201ENST00000562510 KIF21BO75037 1637 aa12.11□□□□□ -0.47
SNX29-201ENST00000562510 NUBP1P53384 320 aa12.11□□□□□ -0.47
SNX29-201ENST00000562510 GOLGA3Q08378 1498 aa12.1□□□□□ -0.47
SNX29-201ENST00000562510 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
SNX29-201ENST00000562510 ABCA5Q8WWZ7 1642 aa12.09□□□□□ -0.47
SNX29-201ENST00000562510 CARMIL1Q5VZK9 1371 aa12.08□□□□□ -0.48
SNX29-201ENST00000562510 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
SNX29-201ENST00000562510 FHAD1B1AJZ9 1412 aa12.08□□□□□ -0.48
SNX29-201ENST00000562510 RAPGEF2Q9Y4G8 1499 aa12.08□□□□□ -0.48
SNX29-201ENST00000562510 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
SNX29-201ENST00000562510 UBTFP17480 764 aaKnown RBP12.07□□□□□ -0.48
SNX29-201ENST00000562510 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
SNX29-201ENST00000562510 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
SNX29-201ENST00000562510 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms