RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 P3H3Q8IVL6 736 aa15.97■□□□□ 0.15
NEIL1-202ENST00000561643 MAP3K1Q13233 1512 aa15.96■□□□□ 0.15
NEIL1-202ENST00000561643 ATP1B4Q9UN42 357 aaPredicted RBP15.95■□□□□ 0.14
NEIL1-202ENST00000561643 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
NEIL1-202ENST00000561643 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
NEIL1-202ENST00000561643 DNMBPQ6XZF7 1577 aa15.94■□□□□ 0.14
NEIL1-202ENST00000561643 LRRC9Q6ZRR7 1453 aa15.93■□□□□ 0.14
NEIL1-202ENST00000561643 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
NEIL1-202ENST00000561643 RAB3GAP2Q9H2M9 1393 aa15.92■□□□□ 0.14
NEIL1-202ENST00000561643 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
NEIL1-202ENST00000561643 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
NEIL1-202ENST00000561643 NESP48681 1621 aa15.91■□□□□ 0.14
NEIL1-202ENST00000561643 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
NEIL1-202ENST00000561643 PHLDB1Q86UU1 1377 aa15.89■□□□□ 0.14
NEIL1-202ENST00000561643 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
NEIL1-202ENST00000561643 PCF11O94913 1555 aaKnown RBP15.88■□□□□ 0.13
NEIL1-202ENST00000561643 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
NEIL1-202ENST00000561643 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
NEIL1-202ENST00000561643 EFCAB5A4FU69 1503 aa15.83■□□□□ 0.12
NEIL1-202ENST00000561643 CUL7Q14999 1698 aa15.82■□□□□ 0.12
NEIL1-202ENST00000561643 FYCO1Q9BQS8 1478 aa15.82■□□□□ 0.12
NEIL1-202ENST00000561643 MAPKBP1O60336 1514 aa15.81■□□□□ 0.12
NEIL1-202ENST00000561643 CASKIN1Q8WXD9 1431 aa15.8■□□□□ 0.12
NEIL1-202ENST00000561643 ANP32EQ9BTT0 268 aa15.79■□□□□ 0.12
NEIL1-202ENST00000561643 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
NEIL1-202ENST00000561643 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.12
NEIL1-202ENST00000561643 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.12
NEIL1-202ENST00000561643 TDRD9Q8NDG6 1382 aaKnown RBP15.77■□□□□ 0.11
NEIL1-202ENST00000561643 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.11
NEIL1-202ENST00000561643 FMN1Q68DA7 1419 aa15.77■□□□□ 0.11
NEIL1-202ENST00000561643 SIN3AQ96ST3 1273 aa15.74■□□□□ 0.11
NEIL1-202ENST00000561643 MTUS2Q5JR59 1369 aa15.72■□□□□ 0.11
NEIL1-202ENST00000561643 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
NEIL1-202ENST00000561643 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
NEIL1-202ENST00000561643 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
NEIL1-202ENST00000561643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.7■□□□□ 0.1
NEIL1-202ENST00000561643 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
NEIL1-202ENST00000561643 FGD6Q6ZV73 1430 aa15.69■□□□□ 0.1
NEIL1-202ENST00000561643 ABCA5Q8WWZ7 1642 aa15.69■□□□□ 0.1
NEIL1-202ENST00000561643 TSHZ2Q9NRE2 1034 aa15.67■□□□□ 0.1
NEIL1-202ENST00000561643 SUPT16HQ9Y5B9 1047 aaKnown RBP15.67■□□□□ 0.1
NEIL1-202ENST00000561643 TIMELESSQ9UNS1 1208 aa15.65■□□□□ 0.1
NEIL1-202ENST00000561643 SAMD9Q5K651 1589 aa15.64■□□□□ 0.09
NEIL1-202ENST00000561643 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
NEIL1-202ENST00000561643 GRIN2BQ13224 1484 aa15.61■□□□□ 0.09
NEIL1-202ENST00000561643 NCOA2Q15596 1464 aa15.61■□□□□ 0.09
NEIL1-202ENST00000561643 DDX10Q13206 875 aaKnown RBP15.6■□□□□ 0.09
NEIL1-202ENST00000561643 CCDC18Q5T9S5 1454 aa15.6■□□□□ 0.09
NEIL1-202ENST00000561643 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
NEIL1-202ENST00000561643 MYOM3Q5VTT5 1437 aa15.59■□□□□ 0.09
NEIL1-202ENST00000561643 PPP1R15AO75807 674 aaPredicted RBP15.59■□□□□ 0.09
NEIL1-202ENST00000561643 PTPRKQ15262 1439 aa15.58■□□□□ 0.08
NEIL1-202ENST00000561643 HFM1A2PYH4 1435 aa15.58■□□□□ 0.08
NEIL1-202ENST00000561643 THOC2Q8NI27 1593 aaKnown RBP15.57■□□□□ 0.08
NEIL1-202ENST00000561643 TONSLQ96HA7 1378 aa15.57■□□□□ 0.08
NEIL1-202ENST00000561643 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
NEIL1-202ENST00000561643 KCNH8Q96L42 1107 aa15.56■□□□□ 0.08
NEIL1-202ENST00000561643 EHBP1L1Q8N3D4 1523 aa15.56■□□□□ 0.08
NEIL1-202ENST00000561643 HIRIP3Q9BW71 556 aaPredicted RBP15.56■□□□□ 0.08
NEIL1-202ENST00000561643 SUPT6HQ7KZ85 1726 aaKnown RBP15.56■□□□□ 0.08
NEIL1-202ENST00000561643 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
NEIL1-202ENST00000561643 UACAQ9BZF9 1416 aa15.55■□□□□ 0.08
NEIL1-202ENST00000561643 PTPN23Q9H3S7 1636 aa15.54■□□□□ 0.08
NEIL1-202ENST00000561643 NAIPQ13075 1403 aa15.53■□□□□ 0.08
NEIL1-202ENST00000561643 ERICH6Q7L0X2 663 aa15.53■□□□□ 0.08
NEIL1-202ENST00000561643 UGGT2Q9NYU1 1516 aa15.51■□□□□ 0.07
NEIL1-202ENST00000561643 MAGI3Q5TCQ9 1506 aa15.49■□□□□ 0.07
NEIL1-202ENST00000561643 IQGAP2Q13576 1575 aa15.49■□□□□ 0.07
NEIL1-202ENST00000561643 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
NEIL1-202ENST00000561643 RRP7BPQ9NSQ0 103 aa15.49■□□□□ 0.07
NEIL1-202ENST00000561643 CHIC2Q9UKJ5 165 aa15.49■□□□□ 0.07
NEIL1-202ENST00000561643 HECW1Q76N89 1606 aa15.48■□□□□ 0.07
NEIL1-202ENST00000561643 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
NEIL1-202ENST00000561643 ARHGEF11O15085 1522 aa15.47■□□□□ 0.07
NEIL1-202ENST00000561643 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
NEIL1-202ENST00000561643 ANP32CO43423 234 aa15.46■□□□□ 0.06
NEIL1-202ENST00000561643 ADAMTS12P58397 1594 aa15.46■□□□□ 0.06
NEIL1-202ENST00000561643 EPRSP07814 1512 aaKnown RBP15.45■□□□□ 0.06
NEIL1-202ENST00000561643 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
NEIL1-202ENST00000561643 FBLN2P98095 1184 aa15.44■□□□□ 0.06
NEIL1-202ENST00000561643 TCOF1Q13428 1488 aaKnown RBP15.43■□□□□ 0.06
NEIL1-202ENST00000561643 BCANQ96GW7 911 aa15.43■□□□□ 0.06
NEIL1-202ENST00000561643 CDK13Q14004 1512 aaKnown RBP15.43■□□□□ 0.06
NEIL1-202ENST00000561643 CCER2I3L3R5 266 aa15.4■□□□□ 0.06
NEIL1-202ENST00000561643 WDR62O43379 1518 aa15.39■□□□□ 0.05
NEIL1-202ENST00000561643 MIA2Q96PC5 1412 aa15.39■□□□□ 0.05
NEIL1-202ENST00000561643 ANO8Q9HCE9 1232 aaPredicted RBP15.39■□□□□ 0.05
NEIL1-202ENST00000561643 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
NEIL1-202ENST00000561643 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
NEIL1-202ENST00000561643 AKNAQ7Z591 1439 aa15.37■□□□□ 0.05
NEIL1-202ENST00000561643 GCC2Q8IWJ2 1684 aa15.37■□□□□ 0.05
NEIL1-202ENST00000561643 MPHOSPH9Q99550 1183 aa15.34■□□□□ 0.05
NEIL1-202ENST00000561643 KDM5BQ9UGL1 1544 aa15.34■□□□□ 0.05
NEIL1-202ENST00000561643 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
NEIL1-202ENST00000561643 KDM6BO15054 1643 aa15.33■□□□□ 0.04
NEIL1-202ENST00000561643 DENND4BO75064 1496 aaPredicted RBP15.32■□□□□ 0.04
NEIL1-202ENST00000561643 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
NEIL1-202ENST00000561643 KIAA0556O60303 1618 aa15.31■□□□□ 0.04
NEIL1-202ENST00000561643 DISP1Q96F81 1524 aa15.3■□□□□ 0.04
NEIL1-202ENST00000561643 FKBP8Q14318 412 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms