RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-215ENST00000561367 ZNF219Q9P2Y4 722 aaPredicted RBP16.74■□□□□ 0.27
KNSTRN-215ENST00000561367 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
KNSTRN-215ENST00000561367 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
KNSTRN-215ENST00000561367 ABCA10Q8WWZ4 1543 aa16.71■□□□□ 0.27
KNSTRN-215ENST00000561367 ABCB7O75027 752 aa16.71■□□□□ 0.27
KNSTRN-215ENST00000561367 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
KNSTRN-215ENST00000561367 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
KNSTRN-215ENST00000561367 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
KNSTRN-215ENST00000561367 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
KNSTRN-215ENST00000561367 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
KNSTRN-215ENST00000561367 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
KNSTRN-215ENST00000561367 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
KNSTRN-215ENST00000561367 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
KNSTRN-215ENST00000561367 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.248e-7■■■□□ 16.1
KNSTRN-215ENST00000561367 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
KNSTRN-215ENST00000561367 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
KNSTRN-215ENST00000561367 EEA1Q15075 1411 aa16.53■□□□□ 0.24
KNSTRN-215ENST00000561367 MAGI1Q96QZ7 1491 aaPredicted RBP16.52■□□□□ 0.23
KNSTRN-215ENST00000561367 PBRM1Q86U86 1689 aa16.49■□□□□ 0.23
KNSTRN-215ENST00000561367 POLA2Q14181 598 aa16.45■□□□□ 0.22
KNSTRN-215ENST00000561367 IGF1RP08069 1367 aa16.45■□□□□ 0.22
KNSTRN-215ENST00000561367 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
KNSTRN-215ENST00000561367 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
KNSTRN-215ENST00000561367 CUL7Q14999 1698 aa16.43■□□□□ 0.22
KNSTRN-215ENST00000561367 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
KNSTRN-215ENST00000561367 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
KNSTRN-215ENST00000561367 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
KNSTRN-215ENST00000561367 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
KNSTRN-215ENST00000561367 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
KNSTRN-215ENST00000561367 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
KNSTRN-215ENST00000561367 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
KNSTRN-215ENST00000561367 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
KNSTRN-215ENST00000561367 ATXN8OSP0DMR3 200 aa16.32■□□□□ 0.2
KNSTRN-215ENST00000561367 FBLN2P98095 1184 aa16.32■□□□□ 0.2
KNSTRN-215ENST00000561367 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
KNSTRN-215ENST00000561367 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
KNSTRN-215ENST00000561367 CHD1O14646 1710 aa16.3■□□□□ 0.2
KNSTRN-215ENST00000561367 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
KNSTRN-215ENST00000561367 NUP160Q12769 1436 aa16.27■□□□□ 0.19
KNSTRN-215ENST00000561367 KIF21BO75037 1637 aa16.27■□□□□ 0.19
KNSTRN-215ENST00000561367 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
KNSTRN-215ENST00000561367 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
KNSTRN-215ENST00000561367 CEP170Q5SW79 1584 aa16.2■□□□□ 0.18
KNSTRN-215ENST00000561367 GOLGA3Q08378 1498 aa16.19■□□□□ 0.18
KNSTRN-215ENST00000561367 CLASP1Q7Z460 1538 aa16.19■□□□□ 0.18
KNSTRN-215ENST00000561367 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
KNSTRN-215ENST00000561367 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
KNSTRN-215ENST00000561367 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
KNSTRN-215ENST00000561367 JPH4Q96JJ6 628 aa16.09■□□□□ 0.17
KNSTRN-215ENST00000561367 UBTFP17480 764 aaKnown RBP16.08■□□□□ 0.16
KNSTRN-215ENST00000561367 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
KNSTRN-215ENST00000561367 UGGT2Q9NYU1 1516 aa16.06■□□□□ 0.16
KNSTRN-215ENST00000561367 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
KNSTRN-215ENST00000561367 CARMIL2Q6F5E8 1435 aa16.04■□□□□ 0.16
KNSTRN-215ENST00000561367 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
KNSTRN-215ENST00000561367 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.15
KNSTRN-215ENST00000561367 ARHGEF11O15085 1522 aa16■□□□□ 0.15
KNSTRN-215ENST00000561367 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
KNSTRN-215ENST00000561367 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
KNSTRN-215ENST00000561367 DISP1Q96F81 1524 aa15.96■□□□□ 0.15
KNSTRN-215ENST00000561367 KIAA0556O60303 1618 aa15.94■□□□□ 0.14
KNSTRN-215ENST00000561367 SAMD9Q5K651 1589 aa15.94■□□□□ 0.14
KNSTRN-215ENST00000561367 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
KNSTRN-215ENST00000561367 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
KNSTRN-215ENST00000561367 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
KNSTRN-215ENST00000561367 LOC105371045A0A1W2PR82 267 aa15.91■□□□□ 0.14
KNSTRN-215ENST00000561367 ERCC6L2Q5T890 1561 aa15.9■□□□□ 0.14
KNSTRN-215ENST00000561367 PTPRGP23470 1445 aa15.89■□□□□ 0.13
KNSTRN-215ENST00000561367 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
KNSTRN-215ENST00000561367 CLIP1P30622 1438 aa15.88■□□□□ 0.13
KNSTRN-215ENST00000561367 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
KNSTRN-215ENST00000561367 ARAP1Q96P48 1450 aa15.87■□□□□ 0.13
KNSTRN-215ENST00000561367 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
KNSTRN-215ENST00000561367 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
KNSTRN-215ENST00000561367 RANGAP1P46060 587 aaPredicted RBP15.83■□□□□ 0.12
KNSTRN-215ENST00000561367 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
KNSTRN-215ENST00000561367 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
KNSTRN-215ENST00000561367 UHRF1BP1LA0JNW5 1464 aa15.8■□□□□ 0.12
KNSTRN-215ENST00000561367 UACAQ9BZF9 1416 aa15.8■□□□□ 0.12
KNSTRN-215ENST00000561367 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
KNSTRN-215ENST00000561367 ABCA8O94911 1581 aa15.76■□□□□ 0.11
KNSTRN-215ENST00000561367 ABCC2Q92887 1545 aa15.76■□□□□ 0.11
KNSTRN-215ENST00000561367 PLB1Q6P1J6 1458 aa15.73■□□□□ 0.11
KNSTRN-215ENST00000561367 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
KNSTRN-215ENST00000561367 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
KNSTRN-215ENST00000561367 TTBK1Q5TCY1 1321 aaPredicted RBP15.72■□□□□ 0.11
KNSTRN-215ENST00000561367 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
KNSTRN-215ENST00000561367 ADCY10Q96PN6 1610 aa15.71■□□□□ 0.11
KNSTRN-215ENST00000561367 CASKIN1Q8WXD9 1431 aa15.7■□□□□ 0.1
KNSTRN-215ENST00000561367 KDM5BQ9UGL1 1544 aa15.7■□□□□ 0.1
KNSTRN-215ENST00000561367 FYCO1Q9BQS8 1478 aa15.7■□□□□ 0.1
KNSTRN-215ENST00000561367 VPS8Q8N3P4 1428 aa15.69■□□□□ 0.1
KNSTRN-215ENST00000561367 POTEHQ6S545 545 aa15.69■□□□□ 0.1
KNSTRN-215ENST00000561367 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
KNSTRN-215ENST00000561367 NUP153P49790 1475 aaKnown RBP15.66■□□□□ 0.1
KNSTRN-215ENST00000561367 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
KNSTRN-215ENST00000561367 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
KNSTRN-215ENST00000561367 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
KNSTRN-215ENST00000561367 PCF11O94913 1555 aaKnown RBP15.63■□□□□ 0.09
KNSTRN-215ENST00000561367 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms