RNA–Protein interactions for RNA: ENST00000561317.1

SPRED1-203, Transcript of sprouty related EVH1 domain containing 1, humanhuman

TSL 4

Gene SPRED1, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-203ENST00000561317 DSG3P32926 999 aa12.17□□□□□ -0.46
SPRED1-203ENST00000561317 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
SPRED1-203ENST00000561317 EIF4G3O43432 1585 aaKnown RBP12.16□□□□□ -0.46
SPRED1-203ENST00000561317 CHD1O14646 1710 aa12.16□□□□□ -0.46
SPRED1-203ENST00000561317 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
SPRED1-203ENST00000561317 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
SPRED1-203ENST00000561317 CCDC88BA6NC98 1476 aa12.12□□□□□ -0.47
SPRED1-203ENST00000561317 ABCB7O75027 752 aa12.1□□□□□ -0.47
SPRED1-203ENST00000561317 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
SPRED1-203ENST00000561317 CHMP7Q8WUX9 453 aaPredicted RBP12.09□□□□□ -0.47
SPRED1-203ENST00000561317 TDRD9Q8NDG6 1382 aaKnown RBP12.07□□□□□ -0.48
SPRED1-203ENST00000561317 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
SPRED1-203ENST00000561317 TARBP1Q13395 1621 aaKnown RBP12.05□□□□□ -0.48
SPRED1-203ENST00000561317 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
SPRED1-203ENST00000561317 SOGA1O94964 1423 aa12.03□□□□□ -0.48
SPRED1-203ENST00000561317 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.49
SPRED1-203ENST00000561317 SNAPC4Q5SXM2 1469 aa12.01□□□□□ -0.49
SPRED1-203ENST00000561317 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
SPRED1-203ENST00000561317 SYNJ1O43426 1573 aa11.97□□□□□ -0.49
SPRED1-203ENST00000561317 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
SPRED1-203ENST00000561317 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
SPRED1-203ENST00000561317 GRIN2BQ13224 1484 aa11.91□□□□□ -0.5
SPRED1-203ENST00000561317 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
SPRED1-203ENST00000561317 MAGI1Q96QZ7 1491 aaPredicted RBP11.91□□□□□ -0.5
SPRED1-203ENST00000561317 SYNJ2O15056 1496 aa11.89□□□□□ -0.51
SPRED1-203ENST00000561317 POLA2Q14181 598 aa11.86□□□□□ -0.51
SPRED1-203ENST00000561317 ERCC6L2Q5T890 1561 aa11.84□□□□□ -0.51
SPRED1-203ENST00000561317 WDR97A6NE52 1622 aa11.83□□□□□ -0.52
SPRED1-203ENST00000561317 CUX1P39880 1505 aa11.83□□□□□ -0.52
SPRED1-203ENST00000561317 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
SPRED1-203ENST00000561317 PBRM1Q86U86 1689 aa11.81□□□□□ -0.52
SPRED1-203ENST00000561317 FAM69CQ0P6D2 419 aa11.79□□□□□ -0.52
SPRED1-203ENST00000561317 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
SPRED1-203ENST00000561317 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
SPRED1-203ENST00000561317 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
SPRED1-203ENST00000561317 GRIN2AQ12879 1464 aa11.74□□□□□ -0.53
SPRED1-203ENST00000561317 KIF13AQ9H1H9 1805 aa11.74□□□□□ -0.53
SPRED1-203ENST00000561317 ABCA10Q8WWZ4 1543 aa11.72□□□□□ -0.53
SPRED1-203ENST00000561317 JPH4Q96JJ6 628 aa11.7□□□□□ -0.54
SPRED1-203ENST00000561317 ABCA5Q8WWZ7 1642 aa11.7□□□□□ -0.54
SPRED1-203ENST00000561317 NUP160Q12769 1436 aa11.69□□□□□ -0.54
SPRED1-203ENST00000561317 PRG4Q92954 1404 aaPredicted RBP11.69□□□□□ -0.54
SPRED1-203ENST00000561317 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
SPRED1-203ENST00000561317 FHAD1B1AJZ9 1412 aa11.66□□□□□ -0.54
SPRED1-203ENST00000561317 ADAMTS12P58397 1594 aa11.66□□□□□ -0.54
SPRED1-203ENST00000561317 ABCC10Q5T3U5 1492 aa11.65□□□□□ -0.54
SPRED1-203ENST00000561317 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
SPRED1-203ENST00000561317 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.54
SPRED1-203ENST00000561317 SHROOM2Q13796 1616 aa11.64□□□□□ -0.55
SPRED1-203ENST00000561317 TSPOAP1O95153 1857 aa11.63□□□□□ -0.55
SPRED1-203ENST00000561317 TTBK1Q5TCY1 1321 aaPredicted RBP11.63□□□□□ -0.55
SPRED1-203ENST00000561317 KDM6BO15054 1643 aa11.62□□□□□ -0.55
SPRED1-203ENST00000561317 DIP2BQ9P265 1576 aa11.58□□□□□ -0.56
SPRED1-203ENST00000561317 MAPKBP1O60336 1514 aa11.55□□□□□ -0.56
SPRED1-203ENST00000561317 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
SPRED1-203ENST00000561317 ADCY10Q96PN6 1610 aa11.54□□□□□ -0.56
SPRED1-203ENST00000561317 TOP2BQ02880 1626 aa11.51□□□□□ -0.57
SPRED1-203ENST00000561317 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
SPRED1-203ENST00000561317 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
SPRED1-203ENST00000561317 POTEHQ6S545 545 aa11.5□□□□□ -0.57
SPRED1-203ENST00000561317 RUSC2Q8N2Y8 1516 aa11.49□□□□□ -0.57
SPRED1-203ENST00000561317 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
SPRED1-203ENST00000561317 PTPRGP23470 1445 aa11.48□□□□□ -0.57
SPRED1-203ENST00000561317 HECW2Q9P2P5 1572 aa11.45□□□□□ -0.58
SPRED1-203ENST00000561317 KIAA0586Q9BVV6 1533 aa11.45□□□□□ -0.58
SPRED1-203ENST00000561317 ASXL2Q76L83 1435 aa11.43□□□□□ -0.58
SPRED1-203ENST00000561317 COL17A1Q9UMD9 1497 aaPredicted RBP11.41□□□□□ -0.58
SPRED1-203ENST00000561317 IGF1RP08069 1367 aa11.41□□□□□ -0.58
SPRED1-203ENST00000561317 PLB1Q6P1J6 1458 aa11.4□□□□□ -0.58
SPRED1-203ENST00000561317 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
SPRED1-203ENST00000561317 TNIKQ9UKE5 1360 aa11.4□□□□□ -0.59
SPRED1-203ENST00000561317 ABCC2Q92887 1545 aa11.4□□□□□ -0.59
SPRED1-203ENST00000561317 FKBP8Q14318 412 aa11.39□□□□□ -0.59
SPRED1-203ENST00000561317 FBXO41Q8TF61 875 aa11.39□□□□□ -0.59
SPRED1-203ENST00000561317 PPRC1Q5VV67 1664 aaKnown RBP11.39□□□□□ -0.59
SPRED1-203ENST00000561317 CARMIL2Q6F5E8 1435 aa11.38□□□□□ -0.59
SPRED1-203ENST00000561317 GLI2P10070 1586 aa11.37□□□□□ -0.59
SPRED1-203ENST00000561317 CUL7Q14999 1698 aa11.36□□□□□ -0.59
SPRED1-203ENST00000561317 CHRDL2Q6WN34 429 aa11.35□□□□□ -0.59
SPRED1-203ENST00000561317 UACAQ9BZF9 1416 aa11.35□□□□□ -0.59
SPRED1-203ENST00000561317 TEX14Q8IWB6 1497 aa11.34□□□□□ -0.59
SPRED1-203ENST00000561317 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
SPRED1-203ENST00000561317 EPRSP07814 1512 aaKnown RBP11.34□□□□□ -0.59
SPRED1-203ENST00000561317 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
SPRED1-203ENST00000561317 CARMIL1Q5VZK9 1371 aa11.33□□□□□ -0.6
SPRED1-203ENST00000561317 UHRF1BP1LA0JNW5 1464 aa11.3□□□□□ -0.6
SPRED1-203ENST00000561317 MAP3K4Q9Y6R4 1608 aa11.29□□□□□ -0.6
SPRED1-203ENST00000561317 REM2Q8IYK8 340 aaPredicted RBP11.29□□□□□ -0.6
SPRED1-203ENST00000561317 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.61
SPRED1-203ENST00000561317 SPDYE4A6NLX3 237 aa11.27□□□□□ -0.61
SPRED1-203ENST00000561317 SPDYE6P0CI01 402 aa11.27□□□□□ -0.61
SPRED1-203ENST00000561317 SPDYE2Q495Y8 402 aa11.27□□□□□ -0.61
SPRED1-203ENST00000561317 CD109Q6YHK3 1445 aa11.26□□□□□ -0.61
SPRED1-203ENST00000561317 KDM5BQ9UGL1 1544 aa11.26□□□□□ -0.61
SPRED1-203ENST00000561317 IQGAP2Q13576 1575 aa11.26□□□□□ -0.61
SPRED1-203ENST00000561317 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
SPRED1-203ENST00000561317 ZCCHC11Q5TAX3 1644 aaKnown RBP11.26□□□□□ -0.61
SPRED1-203ENST00000561317 DISP1Q96F81 1524 aa11.25□□□□□ -0.61
SPRED1-203ENST00000561317 EEA1Q15075 1411 aa11.24□□□□□ -0.61
SPRED1-203ENST00000561317 WDR7Q9Y4E6 1490 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms