RNA–Protein interactions for RNA: ENST00000560941.5

LINS1-211, Transcript of lines homolog 1, humanhuman

TSL 5

Gene LINS1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-211ENST00000560941 FANCD2Q9BXW9 1451 aa14.77□□□□□ -0.04
LINS1-211ENST00000560941 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
LINS1-211ENST00000560941 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
LINS1-211ENST00000560941 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
LINS1-211ENST00000560941 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
LINS1-211ENST00000560941 WDR62O43379 1518 aa14.64□□□□□ -0.07
LINS1-211ENST00000560941 URB2Q14146 1524 aaKnown RBP14.63□□□□□ -0.07
LINS1-211ENST00000560941 HAX1O00165 279 aa14.63□□□□□ -0.07
LINS1-211ENST00000560941 SSUH2Q9Y2M2 353 aa14.62□□□□□ -0.07
LINS1-211ENST00000560941 PRDM2Q13029 1718 aa14.58□□□□□ -0.07
LINS1-211ENST00000560941 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
LINS1-211ENST00000560941 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
LINS1-211ENST00000560941 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
LINS1-211ENST00000560941 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
LINS1-211ENST00000560941 EVX2Q03828 476 aa14.48□□□□□ -0.09
LINS1-211ENST00000560941 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
LINS1-211ENST00000560941 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
LINS1-211ENST00000560941 DNMBPQ6XZF7 1577 aa14.46□□□□□ -0.09
LINS1-211ENST00000560941 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
LINS1-211ENST00000560941 ZNF608Q9ULD9 1512 aaPredicted RBP14.43□□□□□ -0.1
LINS1-211ENST00000560941 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
LINS1-211ENST00000560941 CUX1P39880 1505 aa14.41□□□□□ -0.1
LINS1-211ENST00000560941 POLA1P09884 1462 aaPredicted RBP14.4□□□□□ -0.1
LINS1-211ENST00000560941 RAD54L2Q9Y4B4 1467 aa14.4□□□□□ -0.1
LINS1-211ENST00000560941 SOGA1O94964 1423 aa14.38□□□□□ -0.11
LINS1-211ENST00000560941 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
LINS1-211ENST00000560941 C19orf67A6NJJ6 358 aa14.36□□□□□ -0.11
LINS1-211ENST00000560941 AQRO60306 1485 aaKnown RBP eCLIP14.36□□□□□ -0.11
LINS1-211ENST00000560941 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
LINS1-211ENST00000560941 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.12
LINS1-211ENST00000560941 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
LINS1-211ENST00000560941 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.121e-6■■■■■ 58.5
LINS1-211ENST00000560941 EIF4G3O43432 1585 aaKnown RBP14.28□□□□□ -0.12
LINS1-211ENST00000560941 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
LINS1-211ENST00000560941 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
LINS1-211ENST00000560941 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
LINS1-211ENST00000560941 TOP2BQ02880 1626 aa14.22□□□□□ -0.13
LINS1-211ENST00000560941 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
LINS1-211ENST00000560941 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
LINS1-211ENST00000560941 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
LINS1-211ENST00000560941 GAPVD1Q14C86 1478 aa14.18□□□□□ -0.14
LINS1-211ENST00000560941 WDR97A6NE52 1622 aa14.16□□□□□ -0.14
LINS1-211ENST00000560941 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
LINS1-211ENST00000560941 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
LINS1-211ENST00000560941 GABBR2O75899 941 aa14.15□□□□□ -0.14
LINS1-211ENST00000560941 CHD1O14646 1710 aa14.12□□□□□ -0.15
LINS1-211ENST00000560941 ABCA5Q8WWZ7 1642 aa14.11□□□□□ -0.15
LINS1-211ENST00000560941 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
LINS1-211ENST00000560941 MAGI1Q96QZ7 1491 aaPredicted RBP14.09□□□□□ -0.15
LINS1-211ENST00000560941 PBRM1Q86U86 1689 aa14.08□□□□□ -0.16
LINS1-211ENST00000560941 SYNJ2O15056 1496 aa14.06□□□□□ -0.16
LINS1-211ENST00000560941 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
LINS1-211ENST00000560941 CD44P16070 742 aaKnown RBP14.01□□□□□ -0.17
LINS1-211ENST00000560941 FHAD1B1AJZ9 1412 aa13.99□□□□□ -0.17
LINS1-211ENST00000560941 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
LINS1-211ENST00000560941 IGF1RP08069 1367 aa13.99□□□□□ -0.17
LINS1-211ENST00000560941 ADAMTS12P58397 1594 aa13.99□□□□□ -0.17
LINS1-211ENST00000560941 ARHGEF11O15085 1522 aa13.99□□□□□ -0.17
LINS1-211ENST00000560941 ERICH3Q5RHP9 1530 aa13.99□□□□□ -0.17
LINS1-211ENST00000560941 RIMBP3CA6NJZ7 1639 aa13.98□□□□□ -0.17
LINS1-211ENST00000560941 RIMBP3BA6NNM3 1639 aa13.98□□□□□ -0.17
LINS1-211ENST00000560941 RIMBP3Q9UFD9 1639 aa13.98□□□□□ -0.17
LINS1-211ENST00000560941 CYB5RLQ6IPT4 315 aa13.98□□□□□ -0.17
LINS1-211ENST00000560941 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
LINS1-211ENST00000560941 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
LINS1-211ENST00000560941 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
LINS1-211ENST00000560941 CLCN6P51797 869 aa13.94□□□□□ -0.18
LINS1-211ENST00000560941 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
LINS1-211ENST00000560941 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
LINS1-211ENST00000560941 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
LINS1-211ENST00000560941 NUP160Q12769 1436 aa13.91□□□□□ -0.18
LINS1-211ENST00000560941 CARMIL1Q5VZK9 1371 aa13.91□□□□□ -0.18
LINS1-211ENST00000560941 LHX8Q68G74 356 aa13.9□□□□□ -0.18
LINS1-211ENST00000560941 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
LINS1-211ENST00000560941 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
LINS1-211ENST00000560941 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
LINS1-211ENST00000560941 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
LINS1-211ENST00000560941 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
LINS1-211ENST00000560941 ERCC6L2Q5T890 1561 aa13.85□□□□□ -0.19
LINS1-211ENST00000560941 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
LINS1-211ENST00000560941 CUL7Q14999 1698 aa13.82□□□□□ -0.2
LINS1-211ENST00000560941 FAM9AQ8IZU1 332 aaPredicted RBP13.82□□□□□ -0.2
LINS1-211ENST00000560941 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
LINS1-211ENST00000560941 RAPGEF2Q9Y4G8 1499 aa13.78□□□□□ -0.2
LINS1-211ENST00000560941 TTBK1Q5TCY1 1321 aaPredicted RBP13.77□□□□□ -0.21
LINS1-211ENST00000560941 KIAA0586Q9BVV6 1533 aa13.77□□□□□ -0.21
LINS1-211ENST00000560941 SHROOM2Q13796 1616 aa13.76□□□□□ -0.21
LINS1-211ENST00000560941 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
LINS1-211ENST00000560941 PRXQ9BXM0 1461 aa13.71□□□□□ -0.21
LINS1-211ENST00000560941 DCBLD2Q96PD2 775 aa13.69□□□□□ -0.22
LINS1-211ENST00000560941 MNX1P50219 401 aaPredicted RBP13.67□□□□□ -0.22
LINS1-211ENST00000560941 IQGAP2Q13576 1575 aa13.66□□□□□ -0.22
LINS1-211ENST00000560941 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
LINS1-211ENST00000560941 RANGAP1P46060 587 aaPredicted RBP13.65□□□□□ -0.22
LINS1-211ENST00000560941 EEA1Q15075 1411 aa13.64□□□□□ -0.23
LINS1-211ENST00000560941 PTPRGP23470 1445 aa13.64□□□□□ -0.23
LINS1-211ENST00000560941 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
LINS1-211ENST00000560941 P3H3Q8IVL6 736 aa13.62□□□□□ -0.23
LINS1-211ENST00000560941 PROM2Q8N271 834 aa13.62□□□□□ -0.23
LINS1-211ENST00000560941 DISP1Q96F81 1524 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms