RNA–Protein interactions for RNA: ENST00000560941.5

LINS1-211, Transcript of lines homolog 1, humanhuman

TSL 5

Gene LINS1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-211ENST00000560941 AEBP2Q6ZN18 517 aaPredicted RBP27.48■■□□□ 1.99
LINS1-211ENST00000560941 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
LINS1-211ENST00000560941 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
LINS1-211ENST00000560941 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
LINS1-211ENST00000560941 FOXD1Q16676 465 aa21.88■■□□□ 1.09
LINS1-211ENST00000560941 PLPPR3Q6T4P5 718 aa20.61■□□□□ 0.89
LINS1-211ENST00000560941 MSH5O43196 834 aa20.58■□□□□ 0.89
LINS1-211ENST00000560941 POTEDQ86YR6 584 aa20.39■□□□□ 0.85
LINS1-211ENST00000560941 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
LINS1-211ENST00000560941 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
LINS1-211ENST00000560941 ADRA2BP18089 450 aa20.19■□□□□ 0.82
LINS1-211ENST00000560941 NISCHQ9Y2I1 1504 aa19.88■□□□□ 0.77
LINS1-211ENST00000560941 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
LINS1-211ENST00000560941 MAPK8IP2Q13387 824 aaPredicted RBP18.58■□□□□ 0.56
LINS1-211ENST00000560941 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
LINS1-211ENST00000560941 PPP4R3CPQ6ZMV5 832 aa18.01■□□□□ 0.47
LINS1-211ENST00000560941 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
LINS1-211ENST00000560941 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
LINS1-211ENST00000560941 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
LINS1-211ENST00000560941 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
LINS1-211ENST00000560941 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
LINS1-211ENST00000560941 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.4
LINS1-211ENST00000560941 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
LINS1-211ENST00000560941 ABCC9O60706 1549 aa17.45■□□□□ 0.38
LINS1-211ENST00000560941 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
LINS1-211ENST00000560941 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
LINS1-211ENST00000560941 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
LINS1-211ENST00000560941 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
LINS1-211ENST00000560941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINS1-211ENST00000560941 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
LINS1-211ENST00000560941 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
LINS1-211ENST00000560941 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
LINS1-211ENST00000560941 NACADO15069 1562 aa16.6■□□□□ 0.25
LINS1-211ENST00000560941 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
LINS1-211ENST00000560941 KCNA4P22459 653 aa16.51■□□□□ 0.23
LINS1-211ENST00000560941 MYO15BQ96JP2 1530 aa16.42■□□□□ 0.22
LINS1-211ENST00000560941 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
LINS1-211ENST00000560941 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
LINS1-211ENST00000560941 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
LINS1-211ENST00000560941 DSG3P32926 999 aa16.35■□□□□ 0.21
LINS1-211ENST00000560941 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
LINS1-211ENST00000560941 CAPN15O75808 1086 aa16.32■□□□□ 0.2
LINS1-211ENST00000560941 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
LINS1-211ENST00000560941 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
LINS1-211ENST00000560941 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
LINS1-211ENST00000560941 APLP2Q06481 763 aa16.12■□□□□ 0.17
LINS1-211ENST00000560941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
LINS1-211ENST00000560941 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
LINS1-211ENST00000560941 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
LINS1-211ENST00000560941 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
LINS1-211ENST00000560941 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
LINS1-211ENST00000560941 POTEHQ6S545 545 aa15.93■□□□□ 0.14
LINS1-211ENST00000560941 ABCB7O75027 752 aa15.92■□□□□ 0.14
LINS1-211ENST00000560941 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
LINS1-211ENST00000560941 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
LINS1-211ENST00000560941 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
LINS1-211ENST00000560941 CC2D2AQ9P2K1 1620 aa15.71■□□□□ 0.11
LINS1-211ENST00000560941 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
LINS1-211ENST00000560941 RBM42Q9BTD8 480 aaKnown RBP15.61■□□□□ 0.09
LINS1-211ENST00000560941 POLA2Q14181 598 aa15.55■□□□□ 0.08
LINS1-211ENST00000560941 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
LINS1-211ENST00000560941 FOXD4L1Q9NU39 408 aa15.5■□□□□ 0.07
LINS1-211ENST00000560941 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
LINS1-211ENST00000560941 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
LINS1-211ENST00000560941 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
LINS1-211ENST00000560941 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
LINS1-211ENST00000560941 MROH2BQ7Z745 1585 aa15.37■□□□□ 0.05
LINS1-211ENST00000560941 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
LINS1-211ENST00000560941 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
LINS1-211ENST00000560941 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
LINS1-211ENST00000560941 ZBTB12Q9Y330 459 aaPredicted RBP15.3■□□□□ 0.04
LINS1-211ENST00000560941 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
LINS1-211ENST00000560941 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
LINS1-211ENST00000560941 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
LINS1-211ENST00000560941 PEG3Q9GZU2 1588 aa15.21■□□□□ 0.03
LINS1-211ENST00000560941 ZBTB22O15209 634 aa15.2■□□□□ 0.02
LINS1-211ENST00000560941 WIZO95785 1651 aa15.19■□□□□ 0.02
LINS1-211ENST00000560941 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
LINS1-211ENST00000560941 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
LINS1-211ENST00000560941 NESP48681 1621 aa15.1■□□□□ 0.01
LINS1-211ENST00000560941 ATXN8OSP0DMR3 200 aa15.08■□□□□ 0
LINS1-211ENST00000560941 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
LINS1-211ENST00000560941 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
LINS1-211ENST00000560941 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
LINS1-211ENST00000560941 CADPSQ9ULU8 1353 aa14.95□□□□□ -0.02
LINS1-211ENST00000560941 PIP4P2Q8N4L2 257 aa14.92□□□□□ -0.02
LINS1-211ENST00000560941 LAMC3Q9Y6N6 1575 aa14.91□□□□□ -0.02
LINS1-211ENST00000560941 SUPT5HO00267 1087 aaKnown RBP14.91□□□□□ -0.02
LINS1-211ENST00000560941 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
LINS1-211ENST00000560941 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
LINS1-211ENST00000560941 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
LINS1-211ENST00000560941 SP7Q8TDD2 431 aaPredicted RBP14.86□□□□□ -0.03
LINS1-211ENST00000560941 FXR2P51116 673 aaKnown RBP eCLIP14.84□□□□□ -0.03
LINS1-211ENST00000560941 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
LINS1-211ENST00000560941 CFTRP13569 1480 aa14.82□□□□□ -0.04
LINS1-211ENST00000560941 SPDYE2BA6NHP3 402 aa14.81□□□□□ -0.04
LINS1-211ENST00000560941 SPDYE6P0CI01 402 aa14.81□□□□□ -0.04
LINS1-211ENST00000560941 SPDYE2Q495Y8 402 aa14.81□□□□□ -0.04
LINS1-211ENST00000560941 FBLN2P98095 1184 aa14.79□□□□□ -0.04
LINS1-211ENST00000560941 CUX2O14529 1486 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms