RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 GOLGA3Q08378 1498 aa11.76□□□□□ -0.53
HMBOX1-214ENST00000560357 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
HMBOX1-214ENST00000560357 GRIN2BQ13224 1484 aa11.75□□□□□ -0.53
HMBOX1-214ENST00000560357 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
HMBOX1-214ENST00000560357 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
HMBOX1-214ENST00000560357 CUL7Q14999 1698 aa11.73□□□□□ -0.53
HMBOX1-214ENST00000560357 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
HMBOX1-214ENST00000560357 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
HMBOX1-214ENST00000560357 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
HMBOX1-214ENST00000560357 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
HMBOX1-214ENST00000560357 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
HMBOX1-214ENST00000560357 SNAPC4Q5SXM2 1469 aa11.67□□□□□ -0.54
HMBOX1-214ENST00000560357 MAGI1Q96QZ7 1491 aaPredicted RBP11.66□□□□□ -0.54
HMBOX1-214ENST00000560357 SYNJ2O15056 1496 aa11.62□□□□□ -0.55
HMBOX1-214ENST00000560357 CEP162Q5TB80 1403 aa11.6□□□□□ -0.55
HMBOX1-214ENST00000560357 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
HMBOX1-214ENST00000560357 CHMP7Q8WUX9 453 aaPredicted RBP11.6□□□□□ -0.55
HMBOX1-214ENST00000560357 CTTNBP2Q8WZ74 1663 aa11.58□□□□□ -0.56
HMBOX1-214ENST00000560357 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
HMBOX1-214ENST00000560357 FBLN2P98095 1184 aa11.57□□□□□ -0.56
HMBOX1-214ENST00000560357 CLIP1P30622 1438 aa11.56□□□□□ -0.56
HMBOX1-214ENST00000560357 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
HMBOX1-214ENST00000560357 RANGAP1P46060 587 aaPredicted RBP11.54□□□□□ -0.56
HMBOX1-214ENST00000560357 CHD1O14646 1710 aa11.54□□□□□ -0.56
HMBOX1-214ENST00000560357 NUP160Q12769 1436 aa11.53□□□□□ -0.56
HMBOX1-214ENST00000560357 KIAA0586Q9BVV6 1533 aa11.53□□□□□ -0.56
HMBOX1-214ENST00000560357 CEP170Q5SW79 1584 aa11.53□□□□□ -0.56
HMBOX1-214ENST00000560357 IQGAP2Q13576 1575 aa11.51□□□□□ -0.57
HMBOX1-214ENST00000560357 CACNB1Q02641 598 aaPredicted RBP11.51□□□□□ -0.57
HMBOX1-214ENST00000560357 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
HMBOX1-214ENST00000560357 ARAP1Q96P48 1450 aa11.48□□□□□ -0.57
HMBOX1-214ENST00000560357 EFCAB5A4FU69 1503 aa11.47□□□□□ -0.57
HMBOX1-214ENST00000560357 UGGT2Q9NYU1 1516 aa11.47□□□□□ -0.57
HMBOX1-214ENST00000560357 SAMD9Q5K651 1589 aa11.45□□□□□ -0.58
HMBOX1-214ENST00000560357 P3H3Q8IVL6 736 aa11.45□□□□□ -0.58
HMBOX1-214ENST00000560357 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
HMBOX1-214ENST00000560357 VPS8Q8N3P4 1428 aa11.43□□□□□ -0.58
HMBOX1-214ENST00000560357 DISP1Q96F81 1524 aa11.42□□□□□ -0.58
HMBOX1-214ENST00000560357 C1QBPQ07021 282 aaKnown RBP11.42□□□□□ -0.58
HMBOX1-214ENST00000560357 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
HMBOX1-214ENST00000560357 CLASP1Q7Z460 1538 aa11.41□□□□□ -0.58
HMBOX1-214ENST00000560357 KIAA0556O60303 1618 aa11.39□□□□□ -0.59
HMBOX1-214ENST00000560357 SHROOM2Q13796 1616 aa11.39□□□□□ -0.59
HMBOX1-214ENST00000560357 OSCARQ8IYS5 282 aa11.39□□□□□ -0.59
HMBOX1-214ENST00000560357 CARMIL2Q6F5E8 1435 aa11.37□□□□□ -0.59
HMBOX1-214ENST00000560357 PRG4Q92954 1404 aaPredicted RBP11.37□□□□□ -0.59
HMBOX1-214ENST00000560357 KCNA4P22459 653 aa11.37□□□□□ -0.59
HMBOX1-214ENST00000560357 FMN1Q68DA7 1419 aa11.36□□□□□ -0.59
HMBOX1-214ENST00000560357 CASKIN1Q8WXD9 1431 aa11.34□□□□□ -0.59
HMBOX1-214ENST00000560357 PCF11O94913 1555 aaKnown RBP11.33□□□□□ -0.6
HMBOX1-214ENST00000560357 ERCC6L2Q5T890 1561 aa11.32□□□□□ -0.6
HMBOX1-214ENST00000560357 FYCO1Q9BQS8 1478 aa11.32□□□□□ -0.6
HMBOX1-214ENST00000560357 APLP2Q06481 763 aa11.31□□□□□ -0.6
HMBOX1-214ENST00000560357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.63e-10■□□□□ 10.3
HMBOX1-214ENST00000560357 TTBK1Q5TCY1 1321 aaPredicted RBP11.3□□□□□ -0.6
HMBOX1-214ENST00000560357 PTPRGP23470 1445 aa11.29□□□□□ -0.6
HMBOX1-214ENST00000560357 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
HMBOX1-214ENST00000560357 ATP1B4Q9UN42 357 aaPredicted RBP11.29□□□□□ -0.6
HMBOX1-214ENST00000560357 MAP3K1Q13233 1512 aa11.29□□□□□ -0.6
HMBOX1-214ENST00000560357 LRRIQ1Q96JM4 1722 aa11.26□□□□□ -0.61
HMBOX1-214ENST00000560357 PLB1Q6P1J6 1458 aa11.26□□□□□ -0.61
HMBOX1-214ENST00000560357 TIAM1Q13009 1591 aa11.26□□□□□ -0.61
HMBOX1-214ENST00000560357 KANK4Q5T7N3 995 aaPredicted RBP11.26□□□□□ -0.61
HMBOX1-214ENST00000560357 HECW1Q76N89 1606 aa11.26□□□□□ -0.61
HMBOX1-214ENST00000560357 RAPGEF6Q8TEU7 1601 aa11.26□□□□□ -0.61
HMBOX1-214ENST00000560357 ABCA8O94911 1581 aa11.25□□□□□ -0.61
HMBOX1-214ENST00000560357 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
HMBOX1-214ENST00000560357 NUP153P49790 1475 aaKnown RBP11.24□□□□□ -0.61
HMBOX1-214ENST00000560357 EPRSP07814 1512 aaKnown RBP11.23□□□□□ -0.61
HMBOX1-214ENST00000560357 CCDC18Q5T9S5 1454 aa11.22□□□□□ -0.61
HMBOX1-214ENST00000560357 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
HMBOX1-214ENST00000560357 UACAQ9BZF9 1416 aa11.22□□□□□ -0.61
HMBOX1-214ENST00000560357 CDK13Q14004 1512 aaKnown RBP11.2□□□□□ -0.62
HMBOX1-214ENST00000560357 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
HMBOX1-214ENST00000560357 TRIM26Q12899 539 aaPredicted RBP11.18□□□□□ -0.62
HMBOX1-214ENST00000560357 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
HMBOX1-214ENST00000560357 ABCC2Q92887 1545 aa11.18□□□□□ -0.62
HMBOX1-214ENST00000560357 UHRF1BP1LA0JNW5 1464 aa11.18□□□□□ -0.62
HMBOX1-214ENST00000560357 ATP10BO94823 1461 aa11.18□□□□□ -0.62
HMBOX1-214ENST00000560357 MAGI3Q5TCQ9 1506 aa11.17□□□□□ -0.62
HMBOX1-214ENST00000560357 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
HMBOX1-214ENST00000560357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
HMBOX1-214ENST00000560357 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
HMBOX1-214ENST00000560357 CDK11AQ9UQ88 783 aaPredicted RBP11.15□□□□□ -0.62
HMBOX1-214ENST00000560357 EHBP1L1Q8N3D4 1523 aa11.14□□□□□ -0.63
HMBOX1-214ENST00000560357 RIMBP3CA6NJZ7 1639 aa11.14□□□□□ -0.63
HMBOX1-214ENST00000560357 RIMBP3BA6NNM3 1639 aa11.14□□□□□ -0.63
HMBOX1-214ENST00000560357 RIMBP3Q9UFD9 1639 aa11.14□□□□□ -0.63
HMBOX1-214ENST00000560357 ADCY10Q96PN6 1610 aa11.13□□□□□ -0.63
HMBOX1-214ENST00000560357 KDM5BQ9UGL1 1544 aa11.13□□□□□ -0.63
HMBOX1-214ENST00000560357 PLEKHD1A6NEE1 506 aa11.12□□□□□ -0.63
HMBOX1-214ENST00000560357 PCGF6Q9BYE7 350 aa11.12□□□□□ -0.63
HMBOX1-214ENST00000560357 TROQ12816 1431 aaPredicted RBP11.11□□□□□ -0.63
HMBOX1-214ENST00000560357 SUPT6HQ7KZ85 1726 aaKnown RBP11.11□□□□□ -0.63
HMBOX1-214ENST00000560357 PHLDB1Q86UU1 1377 aa11.11□□□□□ -0.63
HMBOX1-214ENST00000560357 ZCCHC11Q5TAX3 1644 aaKnown RBP11.1□□□□□ -0.63
HMBOX1-214ENST00000560357 U3KPZ7 1027 aaPredicted RBP11.1□□□□□ -0.63
HMBOX1-214ENST00000560357 NCOA2Q15596 1464 aa11.1□□□□□ -0.63
HMBOX1-214ENST00000560357 CYB5RLQ6IPT4 315 aa11.09□□□□□ -0.63
HMBOX1-214ENST00000560357 RRBP1Q9P2E9 1410 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms