RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 CFTRP13569 1480 aa15.33■□□□□ 0.04
CTDSPL2-208ENST00000559793 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
CTDSPL2-208ENST00000559793 RSF1Q96T23 1441 aaPredicted RBP15.3■□□□□ 0.04
CTDSPL2-208ENST00000559793 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
CTDSPL2-208ENST00000559793 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
CTDSPL2-208ENST00000559793 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
CTDSPL2-208ENST00000559793 FKBP8Q14318 412 aa15.16■□□□□ 0.02
CTDSPL2-208ENST00000559793 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
CTDSPL2-208ENST00000559793 PRDM2Q13029 1718 aa15.12■□□□□ 0.01
CTDSPL2-208ENST00000559793 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
CTDSPL2-208ENST00000559793 PITPNM1O00562 1244 aa15.1■□□□□ 0.01
CTDSPL2-208ENST00000559793 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
CTDSPL2-208ENST00000559793 PROM2Q8N271 834 aa15.08■□□□□ 0
CTDSPL2-208ENST00000559793 IFT140Q96RY7 1462 aa15.08■□□□□ 0
CTDSPL2-208ENST00000559793 RIMBP3CA6NJZ7 1639 aa15.07■□□□□ 0
CTDSPL2-208ENST00000559793 RIMBP3BA6NNM3 1639 aa15.07■□□□□ 0
CTDSPL2-208ENST00000559793 RIMBP3Q9UFD9 1639 aa15.07■□□□□ 0
CTDSPL2-208ENST00000559793 CHRDL2Q6WN34 429 aa15.06■□□□□ 0
CTDSPL2-208ENST00000559793 TOPBP1Q92547 1522 aa15.05■□□□□ -0
CTDSPL2-208ENST00000559793 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
CTDSPL2-208ENST00000559793 ARHGEF11O15085 1522 aa15.01□□□□□ -0.01
CTDSPL2-208ENST00000559793 ABCC8Q09428 1581 aa14.99□□□□□ -0.01
CTDSPL2-208ENST00000559793 CYB5RLQ6IPT4 315 aa14.98□□□□□ -0.01
CTDSPL2-208ENST00000559793 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.01
CTDSPL2-208ENST00000559793 EIF4G3O43432 1585 aaKnown RBP14.96□□□□□ -0.01
CTDSPL2-208ENST00000559793 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
CTDSPL2-208ENST00000559793 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
CTDSPL2-208ENST00000559793 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
CTDSPL2-208ENST00000559793 CHD1O14646 1710 aa14.92□□□□□ -0.02
CTDSPL2-208ENST00000559793 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
CTDSPL2-208ENST00000559793 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
CTDSPL2-208ENST00000559793 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
CTDSPL2-208ENST00000559793 RAD54L2Q9Y4B4 1467 aa14.86□□□□□ -0.03
CTDSPL2-208ENST00000559793 ARAP1Q96P48 1450 aa14.85□□□□□ -0.03
CTDSPL2-208ENST00000559793 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
CTDSPL2-208ENST00000559793 SOGA1O94964 1423 aa14.84□□□□□ -0.03
CTDSPL2-208ENST00000559793 PIP4P2Q8N4L2 257 aa14.84□□□□□ -0.03
CTDSPL2-208ENST00000559793 POTEHQ6S545 545 aa14.8□□□□□ -0.04
CTDSPL2-208ENST00000559793 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
CTDSPL2-208ENST00000559793 CHMP7Q8WUX9 453 aaPredicted RBP14.76□□□□□ -0.05
CTDSPL2-208ENST00000559793 SNAPC4Q5SXM2 1469 aa14.76□□□□□ -0.05
CTDSPL2-208ENST00000559793 CUX1P39880 1505 aa14.73□□□□□ -0.05
CTDSPL2-208ENST00000559793 CLASP1Q7Z460 1538 aa14.73□□□□□ -0.05
CTDSPL2-208ENST00000559793 PRKAR2AP13861 404 aaKnown RBP14.71□□□□□ -0.05
CTDSPL2-208ENST00000559793 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
CTDSPL2-208ENST00000559793 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
CTDSPL2-208ENST00000559793 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
CTDSPL2-208ENST00000559793 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
CTDSPL2-208ENST00000559793 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
CTDSPL2-208ENST00000559793 CHADLQ6NUI6 762 aa14.67□□□□□ -0.06
CTDSPL2-208ENST00000559793 SYNJ2O15056 1496 aa14.67□□□□□ -0.06
CTDSPL2-208ENST00000559793 CREBZFQ9NS37 354 aa14.65□□□□□ -0.06
CTDSPL2-208ENST00000559793 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
CTDSPL2-208ENST00000559793 PBRM1Q86U86 1689 aa14.61□□□□□ -0.07
CTDSPL2-208ENST00000559793 ABCA10Q8WWZ4 1543 aa14.57□□□□□ -0.08
CTDSPL2-208ENST00000559793 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
CTDSPL2-208ENST00000559793 MIER1Q8N108 512 aa14.55□□□□□ -0.08
CTDSPL2-208ENST00000559793 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
CTDSPL2-208ENST00000559793 FARP1Q9Y4F1 1045 aaPredicted RBP14.53□□□□□ -0.08
CTDSPL2-208ENST00000559793 ERCC6L2Q5T890 1561 aa14.52□□□□□ -0.08
CTDSPL2-208ENST00000559793 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
CTDSPL2-208ENST00000559793 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
CTDSPL2-208ENST00000559793 MNX1P50219 401 aaPredicted RBP14.49□□□□□ -0.09
CTDSPL2-208ENST00000559793 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
CTDSPL2-208ENST00000559793 VASPP50552 380 aaPredicted RBP14.48□□□□□ -0.09
CTDSPL2-208ENST00000559793 NUP160Q12769 1436 aa14.48□□□□□ -0.09
CTDSPL2-208ENST00000559793 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
CTDSPL2-208ENST00000559793 CEP170Q5SW79 1584 aa14.47□□□□□ -0.09
CTDSPL2-208ENST00000559793 ADAMTS12P58397 1594 aa14.44□□□□□ -0.1
CTDSPL2-208ENST00000559793 FHAD1B1AJZ9 1412 aa14.43□□□□□ -0.1
CTDSPL2-208ENST00000559793 TOP2BQ02880 1626 aa14.42□□□□□ -0.1
CTDSPL2-208ENST00000559793 BIVM-ERCC5R4GMW8 1640 aa14.42□□□□□ -0.1
CTDSPL2-208ENST00000559793 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
CTDSPL2-208ENST00000559793 HAX1O00165 279 aa14.4□□□□□ -0.1
CTDSPL2-208ENST00000559793 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
CTDSPL2-208ENST00000559793 JPH4Q96JJ6 628 aa14.39□□□□□ -0.11
CTDSPL2-208ENST00000559793 ERICH3Q5RHP9 1530 aa14.38□□□□□ -0.11
CTDSPL2-208ENST00000559793 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
CTDSPL2-208ENST00000559793 PRG4Q92954 1404 aaPredicted RBP14.37□□□□□ -0.11
CTDSPL2-208ENST00000559793 ZBTB47Q9UFB7 747 aaPredicted RBP14.36□□□□□ -0.11
CTDSPL2-208ENST00000559793 KIF13AQ9H1H9 1805 aa14.35□□□□□ -0.11
CTDSPL2-208ENST00000559793 EVX2Q03828 476 aa14.29□□□□□ -0.12
CTDSPL2-208ENST00000559793 FAM69CQ0P6D2 419 aa14.29□□□□□ -0.12
CTDSPL2-208ENST00000559793 IFNLR1Q8IU57 520 aaPredicted RBP14.29□□□□□ -0.12
CTDSPL2-208ENST00000559793 CD44P16070 742 aaKnown RBP14.28□□□□□ -0.12
CTDSPL2-208ENST00000559793 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
CTDSPL2-208ENST00000559793 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
CTDSPL2-208ENST00000559793 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
CTDSPL2-208ENST00000559793 IGF1RP08069 1367 aa14.22□□□□□ -0.13
CTDSPL2-208ENST00000559793 NUBP1P53384 320 aa14.22□□□□□ -0.13
CTDSPL2-208ENST00000559793 ADCY10Q96PN6 1610 aa14.21□□□□□ -0.13
CTDSPL2-208ENST00000559793 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
CTDSPL2-208ENST00000559793 KIAA0586Q9BVV6 1533 aa14.2□□□□□ -0.14
CTDSPL2-208ENST00000559793 DIP2BQ9P265 1576 aa14.18□□□□□ -0.14
CTDSPL2-208ENST00000559793 RASEFQ8IZ41 740 aa14.18□□□□□ -0.14
CTDSPL2-208ENST00000559793 PAK3O75914 559 aaPredicted RBP14.17□□□□□ -0.14
CTDSPL2-208ENST00000559793 ZRANB1Q9UGI0 708 aa14.17□□□□□ -0.14
CTDSPL2-208ENST00000559793 TSPOAP1O95153 1857 aa14.15□□□□□ -0.14
CTDSPL2-208ENST00000559793 KDM4FA0A1W2PPD8 638 aa14.15□□□□□ -0.14
CTDSPL2-208ENST00000559793 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms