RNA–Protein interactions for RNA: ENST00000559588.5

IPO4-209, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-209ENST00000559588 TNIKQ9UKE5 1360 aa15.05■□□□□ -0
IPO4-209ENST00000559588 NCAPD3P42695 1498 aa15.03■□□□□ -0
IPO4-209ENST00000559588 VSIG10Q8N0Z9 540 aa15.03■□□□□ -0
IPO4-209ENST00000559588 NPM2Q86SE8 214 aaKnown RBP15□□□□□ -0.01
IPO4-209ENST00000559588 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
IPO4-209ENST00000559588 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
IPO4-209ENST00000559588 ANP32AP39687 249 aaKnown RBP14.98□□□□□ -0.01
IPO4-209ENST00000559588 ATP1B4Q9UN42 357 aaPredicted RBP14.98□□□□□ -0.01
IPO4-209ENST00000559588 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
IPO4-209ENST00000559588 DDX10Q13206 875 aaKnown RBP14.97□□□□□ -0.01
IPO4-209ENST00000559588 A0A0U1RQG5 324 aaPredicted RBP14.96□□□□□ -0.01
IPO4-209ENST00000559588 LAS1LQ9Y4W2 734 aaKnown RBP14.95□□□□□ -0.02
IPO4-209ENST00000559588 CLIP1P30622 1438 aa14.95□□□□□ -0.02
IPO4-209ENST00000559588 HIRIP3Q9BW71 556 aaPredicted RBP14.94□□□□□ -0.02
IPO4-209ENST00000559588 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
IPO4-209ENST00000559588 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
IPO4-209ENST00000559588 NEFMP07197 916 aa14.91□□□□□ -0.02
IPO4-209ENST00000559588 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
IPO4-209ENST00000559588 B4GALNT3Q6L9W6 998 aa14.88□□□□□ -0.03
IPO4-209ENST00000559588 KANK4Q5T7N3 995 aaPredicted RBP14.87□□□□□ -0.03
IPO4-209ENST00000559588 BRPF3Q9ULD4 1205 aa14.87□□□□□ -0.03
IPO4-209ENST00000559588 NESP48681 1621 aa14.87□□□□□ -0.03
IPO4-209ENST00000559588 HNRNPUQ00839 825 aaKnown RBP eCLIP14.85□□□□□ -0.03
IPO4-209ENST00000559588 P3H3Q8IVL6 736 aa14.85□□□□□ -0.03
IPO4-209ENST00000559588 ZMYND15Q9H091 742 aa14.83□□□□□ -0.03
IPO4-209ENST00000559588 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
IPO4-209ENST00000559588 ANP32CO43423 234 aa14.81□□□□□ -0.04
IPO4-209ENST00000559588 FBLN2P98095 1184 aa14.78□□□□□ -0.04
IPO4-209ENST00000559588 CFTRP13569 1480 aa14.77□□□□□ -0.04
IPO4-209ENST00000559588 RAPGEF2Q9Y4G8 1499 aa14.77□□□□□ -0.05
IPO4-209ENST00000559588 SYNJ1O43426 1573 aa14.77□□□□□ -0.05
IPO4-209ENST00000559588 EEA1Q15075 1411 aa14.76□□□□□ -0.05
IPO4-209ENST00000559588 VPS8Q8N3P4 1428 aa14.76□□□□□ -0.05
IPO4-209ENST00000559588 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
IPO4-209ENST00000559588 FAM50AQ14320 339 aaKnown RBP14.75□□□□□ -0.05
IPO4-209ENST00000559588 DHX57Q6P158 1386 aaKnown RBP14.75□□□□□ -0.05
IPO4-209ENST00000559588 SIN3AQ96ST3 1273 aa14.75□□□□□ -0.05
IPO4-209ENST00000559588 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
IPO4-209ENST00000559588 DAXXQ9UER7 740 aaPredicted RBP14.74□□□□□ -0.05
IPO4-209ENST00000559588 CUX2O14529 1486 aa14.74□□□□□ -0.05
IPO4-209ENST00000559588 ARID4BQ4LE39 1312 aaPredicted RBP14.74□□□□□ -0.05
IPO4-209ENST00000559588 ARXQ96QS3 562 aa14.73□□□□□ -0.05
IPO4-209ENST00000559588 KIF27Q86VH2 1401 aa14.72□□□□□ -0.05
IPO4-209ENST00000559588 CNGB1Q14028 1251 aaPredicted RBP14.72□□□□□ -0.05
IPO4-209ENST00000559588 IPO9Q96P70 1041 aaKnown RBP14.71□□□□□ -0.05
IPO4-209ENST00000559588 PPP4R2Q9NY27 417 aa14.71□□□□□ -0.05
IPO4-209ENST00000559588 TDRD9Q8NDG6 1382 aaKnown RBP14.7□□□□□ -0.06
IPO4-209ENST00000559588 RSPH6AQ9H0K4 717 aa14.7□□□□□ -0.06
IPO4-209ENST00000559588 NAP1L5Q96NT1 182 aaPredicted RBP14.7□□□□□ -0.06
IPO4-209ENST00000559588 PDS5BQ9NTI5 1447 aa14.68□□□□□ -0.06
IPO4-209ENST00000559588 ARID3CA6NKF2 412 aa14.67□□□□□ -0.06
IPO4-209ENST00000559588 ERCC6Q03468 1493 aa14.67□□□□□ -0.06
IPO4-209ENST00000559588 CUX1P39880 1505 aa14.65□□□□□ -0.06
IPO4-209ENST00000559588 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
IPO4-209ENST00000559588 HSP90AA2PQ14568 343 aaPredicted RBP14.63□□□□□ -0.07
IPO4-209ENST00000559588 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
IPO4-209ENST00000559588 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
IPO4-209ENST00000559588 SENP3-EIF4A1A0A087X0R7 540 aa14.59□□□□□ -0.07
IPO4-209ENST00000559588 KIF21BO75037 1637 aa14.59□□□□□ -0.07
IPO4-209ENST00000559588 GSE1Q14687 1217 aa14.57□□□□□ -0.08
IPO4-209ENST00000559588 FAM9BQ8IZU0 186 aa14.56□□□□□ -0.08
IPO4-209ENST00000559588 PPM1GO15355 546 aaPredicted RBP14.55□□□□□ -0.08
IPO4-209ENST00000559588 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
IPO4-209ENST00000559588 HSP90AA1P07900 732 aaKnown RBP14.54□□□□□ -0.08
IPO4-209ENST00000559588 RAB3GAP2Q9H2M9 1393 aa14.54□□□□□ -0.08
IPO4-209ENST00000559588 CCNB3Q8WWL7 1395 aa14.54□□□□□ -0.08
IPO4-209ENST00000559588 IGF1RP08069 1367 aa14.53□□□□□ -0.08
IPO4-209ENST00000559588 CCER2I3L3R5 266 aa14.52□□□□□ -0.08
IPO4-209ENST00000559588 PDE4CQ08493 712 aa14.52□□□□□ -0.08
IPO4-209ENST00000559588 FRAT1Q92837 279 aaPredicted RBP14.5□□□□□ -0.09
IPO4-209ENST00000559588 RBM10P98175 930 aaKnown RBP14.5□□□□□ -0.09
IPO4-209ENST00000559588 CHMP7Q8WUX9 453 aaPredicted RBP14.5□□□□□ -0.09
IPO4-209ENST00000559588 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
IPO4-209ENST00000559588 ARAP1Q96P48 1450 aa14.49□□□□□ -0.09
IPO4-209ENST00000559588 POLA1P09884 1462 aaPredicted RBP14.48□□□□□ -0.09
IPO4-209ENST00000559588 SLC4A3P48751 1232 aa14.48□□□□□ -0.09
IPO4-209ENST00000559588 USP35Q9P2H5 1018 aa14.47□□□□□ -0.09
IPO4-209ENST00000559588 PPP1R15AO75807 674 aaPredicted RBP14.46□□□□□ -0.09
IPO4-209ENST00000559588 AQRO60306 1485 aaKnown RBP eCLIP14.45□□□□□ -0.11e-6■■■■■ 27.6
IPO4-209ENST00000559588 PNNQ9H307 717 aaKnown RBP14.44□□□□□ -0.1
IPO4-209ENST00000559588 URB2Q14146 1524 aaKnown RBP14.43□□□□□ -0.1
IPO4-209ENST00000559588 ARID3AQ99856 593 aa14.43□□□□□ -0.1
IPO4-209ENST00000559588 POLR3GLQ9BT43 218 aa14.42□□□□□ -0.1
IPO4-209ENST00000559588 C11orf95C9JLR9 678 aaPredicted RBP14.41□□□□□ -0.1
IPO4-209ENST00000559588 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
IPO4-209ENST00000559588 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
IPO4-209ENST00000559588 WASHC2AQ641Q2 1341 aa14.4□□□□□ -0.1
IPO4-209ENST00000559588 FAM43AQ8N2R8 423 aa14.39□□□□□ -0.11
IPO4-209ENST00000559588 NFKBIBQ15653 356 aa14.38□□□□□ -0.11
IPO4-209ENST00000559588 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
IPO4-209ENST00000559588 GAPVD1Q14C86 1478 aa14.37□□□□□ -0.11
IPO4-209ENST00000559588 DNMBPQ6XZF7 1577 aa14.37□□□□□ -0.11
IPO4-209ENST00000559588 CHIC2Q9UKJ5 165 aa14.37□□□□□ -0.11
IPO4-209ENST00000559588 PRXQ9BXM0 1461 aa14.37□□□□□ -0.11
IPO4-209ENST00000559588 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
IPO4-209ENST00000559588 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
IPO4-209ENST00000559588 BCL11BQ9C0K0 894 aaPredicted RBP14.36□□□□□ -0.11
IPO4-209ENST00000559588 TONSLQ96HA7 1378 aa14.36□□□□□ -0.11
IPO4-209ENST00000559588 SETD5Q9C0A6 1442 aa14.36□□□□□ -0.11
IPO4-209ENST00000559588 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms