RNA–Protein interactions for RNA: ENST00000559169.1

LINS1-203, Transcript of lines homolog 1, humanhuman

TSL 2

Gene LINS1, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-203ENST00000559169 HMGXB3Q12766 1538 aa10.56□□□□□ -0.72
LINS1-203ENST00000559169 WRNQ14191 1432 aaPredicted RBP eCLIP10.56□□□□□ -0.72
LINS1-203ENST00000559169 NESP48681 1621 aa10.55□□□□□ -0.72
LINS1-203ENST00000559169 RANGAP1P46060 587 aaPredicted RBP10.54□□□□□ -0.72
LINS1-203ENST00000559169 TTBK1Q5TCY1 1321 aaPredicted RBP10.52□□□□□ -0.73
LINS1-203ENST00000559169 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
LINS1-203ENST00000559169 NPM1P06748 294 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINS1-203ENST00000559169 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
LINS1-203ENST00000559169 ZBTB12Q9Y330 459 aaPredicted RBP10.51□□□□□ -0.73
LINS1-203ENST00000559169 KLHL34Q8N239 644 aa10.5□□□□□ -0.73
LINS1-203ENST00000559169 RGL2O15211 777 aa10.46□□□□□ -0.73
LINS1-203ENST00000559169 CUX1P39880 1505 aa10.46□□□□□ -0.73
LINS1-203ENST00000559169 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.74
LINS1-203ENST00000559169 CFTRP13569 1480 aa10.45□□□□□ -0.74
LINS1-203ENST00000559169 PLCD3Q8N3E9 789 aa10.44□□□□□ -0.74
LINS1-203ENST00000559169 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
LINS1-203ENST00000559169 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
LINS1-203ENST00000559169 SPDYE2Q495Y8 402 aa10.43□□□□□ -0.74
LINS1-203ENST00000559169 UBTFP17480 764 aaKnown RBP10.43□□□□□ -0.74
LINS1-203ENST00000559169 CADPSQ9ULU8 1353 aa10.42□□□□□ -0.74
LINS1-203ENST00000559169 MIER1Q8N108 512 aa10.41□□□□□ -0.74
LINS1-203ENST00000559169 ECM2O94769 699 aaPredicted RBP10.41□□□□□ -0.74
LINS1-203ENST00000559169 TOP2BQ02880 1626 aa10.4□□□□□ -0.74
LINS1-203ENST00000559169 SPOCK2Q92563 424 aa10.4□□□□□ -0.74
LINS1-203ENST00000559169 BIVM-ERCC5R4GMW8 1640 aa10.37□□□□□ -0.75
LINS1-203ENST00000559169 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
LINS1-203ENST00000559169 PRDM2Q13029 1718 aa10.36□□□□□ -0.75
LINS1-203ENST00000559169 RAPGEF2Q9Y4G8 1499 aa10.36□□□□□ -0.75
LINS1-203ENST00000559169 PRKCSHP14314 528 aaPredicted RBP10.35□□□□□ -0.75
LINS1-203ENST00000559169 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
LINS1-203ENST00000559169 RAD54L2Q9Y4B4 1467 aa10.34□□□□□ -0.75
LINS1-203ENST00000559169 CACNB1Q02641 598 aaPredicted RBP10.34□□□□□ -0.75
LINS1-203ENST00000559169 KIF21AQ7Z4S6 1674 aa10.33□□□□□ -0.76
LINS1-203ENST00000559169 CEP162Q5TB80 1403 aa10.33□□□□□ -0.76
LINS1-203ENST00000559169 FGD5Q6ZNL6 1462 aa10.32□□□□□ -0.76
LINS1-203ENST00000559169 CIZ1Q9ULV3 898 aaPredicted RBP10.3□□□□□ -0.76
LINS1-203ENST00000559169 CUX2O14529 1486 aa10.29□□□□□ -0.76
LINS1-203ENST00000559169 PAXIP1Q6ZW49 1069 aaPredicted RBP10.29□□□□□ -0.76
LINS1-203ENST00000559169 RNF25Q96BH1 459 aaPredicted RBP10.29□□□□□ -0.76
LINS1-203ENST00000559169 CFAP44Q96MT7 982 aa10.29□□□□□ -0.76
LINS1-203ENST00000559169 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
LINS1-203ENST00000559169 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
LINS1-203ENST00000559169 GOLGA3Q08378 1498 aa10.28□□□□□ -0.76
LINS1-203ENST00000559169 TOPBP1Q92547 1522 aa10.26□□□□□ -0.77
LINS1-203ENST00000559169 CEP164Q9UPV0 1460 aa10.25□□□□□ -0.77
LINS1-203ENST00000559169 TNIKQ9UKE5 1360 aa10.24□□□□□ -0.77
LINS1-203ENST00000559169 POLA1P09884 1462 aaPredicted RBP10.24□□□□□ -0.77
LINS1-203ENST00000559169 EEA1Q15075 1411 aa10.23□□□□□ -0.77
LINS1-203ENST00000559169 CHGAP10645 457 aaKnown RBP10.23□□□□□ -0.77
LINS1-203ENST00000559169 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
LINS1-203ENST00000559169 KIF21BO75037 1637 aa10.23□□□□□ -0.77
LINS1-203ENST00000559169 TSHZ2Q9NRE2 1034 aa10.22□□□□□ -0.77
LINS1-203ENST00000559169 LAMC3Q9Y6N6 1575 aa10.22□□□□□ -0.77
LINS1-203ENST00000559169 KIF27Q86VH2 1401 aa10.22□□□□□ -0.77
LINS1-203ENST00000559169 TRIM26Q12899 539 aaPredicted RBP10.21□□□□□ -0.77
LINS1-203ENST00000559169 P3H3Q8IVL6 736 aa10.21□□□□□ -0.78
LINS1-203ENST00000559169 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.78
LINS1-203ENST00000559169 IGF1RP08069 1367 aa10.2□□□□□ -0.78
LINS1-203ENST00000559169 CLIP1P30622 1438 aa10.19□□□□□ -0.78
LINS1-203ENST00000559169 PRXQ9BXM0 1461 aa10.19□□□□□ -0.78
LINS1-203ENST00000559169 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
LINS1-203ENST00000559169 PDS5BQ9NTI5 1447 aa10.16□□□□□ -0.78
LINS1-203ENST00000559169 CLEC11AQ9Y240 323 aa10.16□□□□□ -0.78
LINS1-203ENST00000559169 CARMIL1Q5VZK9 1371 aa10.14□□□□□ -0.79
LINS1-203ENST00000559169 AQRO60306 1485 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINS1-203ENST00000559169 NUBP1P53384 320 aa10.13□□□□□ -0.79
LINS1-203ENST00000559169 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.13□□□□□ -0.79
LINS1-203ENST00000559169 ARAP1Q96P48 1450 aa10.12□□□□□ -0.79
LINS1-203ENST00000559169 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
LINS1-203ENST00000559169 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
LINS1-203ENST00000559169 NKX1-1Q15270 411 aaPredicted RBP10.12□□□□□ -0.79
LINS1-203ENST00000559169 ERCC6Q03468 1493 aa10.11□□□□□ -0.79
LINS1-203ENST00000559169 HRCP23327 699 aa10.11□□□□□ -0.79
LINS1-203ENST00000559169 ABCA10Q8WWZ4 1543 aa10.11□□□□□ -0.79
LINS1-203ENST00000559169 WDR97A6NE52 1622 aa10.1□□□□□ -0.79
LINS1-203ENST00000559169 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
LINS1-203ENST00000559169 ATP1B4Q9UN42 357 aaPredicted RBP10.1□□□□□ -0.79
LINS1-203ENST00000559169 KANK4Q5T7N3 995 aaPredicted RBP10.09□□□□□ -0.79
LINS1-203ENST00000559169 ERICH3Q5RHP9 1530 aa10.09□□□□□ -0.79
LINS1-203ENST00000559169 CREBZFQ9NS37 354 aa10.09□□□□□ -0.79
LINS1-203ENST00000559169 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
LINS1-203ENST00000559169 TARBP1Q13395 1621 aaKnown RBP10.08□□□□□ -0.8
LINS1-203ENST00000559169 ARHGAP35Q9NRY4 1499 aa10.08□□□□□ -0.8
LINS1-203ENST00000559169 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
LINS1-203ENST00000559169 SPRYD3Q8NCJ5 442 aa10.08□□□□□ -0.8
LINS1-203ENST00000559169 MRC2Q9UBG0 1479 aa10.07□□□□□ -0.8
LINS1-203ENST00000559169 GAPVD1Q14C86 1478 aa10.07□□□□□ -0.8
LINS1-203ENST00000559169 BCANQ96GW7 911 aa10.06□□□□□ -0.8
LINS1-203ENST00000559169 VPS8Q8N3P4 1428 aa10.06□□□□□ -0.8
LINS1-203ENST00000559169 ARID3CA6NKF2 412 aa10.06□□□□□ -0.8
LINS1-203ENST00000559169 ABCA5Q8WWZ7 1642 aa10.05□□□□□ -0.8
LINS1-203ENST00000559169 REM2Q8IYK8 340 aaPredicted RBP10.04□□□□□ -0.8
LINS1-203ENST00000559169 FHOD3Q2V2M9 1422 aa10.04□□□□□ -0.8
LINS1-203ENST00000559169 PLEKHG5O94827 1062 aa10.03□□□□□ -0.8
LINS1-203ENST00000559169 PBRM1Q86U86 1689 aa10.02□□□□□ -0.81
LINS1-203ENST00000559169 DCAF8Q5TAQ9 597 aa10.02□□□□□ -0.81
LINS1-203ENST00000559169 THOC2Q8NI27 1593 aaKnown RBP10.02□□□□□ -0.81
LINS1-203ENST00000559169 TPRNQ4KMQ1 711 aa10.01□□□□□ -0.81
LINS1-203ENST00000559169 HS6ST3Q8IZP7 471 aa10.01□□□□□ -0.81
LINS1-203ENST00000559169 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms