RNA–Protein interactions for RNA: ENST00000559169.1

LINS1-203, Transcript of lines homolog 1, humanhuman

TSL 2

Gene LINS1, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-203ENST00000559169 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
LINS1-203ENST00000559169 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
LINS1-203ENST00000559169 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
LINS1-203ENST00000559169 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
LINS1-203ENST00000559169 PLPPR3Q6T4P5 718 aa14.85□□□□□ -0.03
LINS1-203ENST00000559169 ADRA2BP18089 450 aa14.34□□□□□ -0.11
LINS1-203ENST00000559169 NISCHQ9Y2I1 1504 aa14.34□□□□□ -0.11
LINS1-203ENST00000559169 PPP6R1Q9UPN7 881 aa14.27□□□□□ -0.13
LINS1-203ENST00000559169 FOXD1Q16676 465 aa14.22□□□□□ -0.13
LINS1-203ENST00000559169 KCNA4P22459 653 aa13.76□□□□□ -0.21
LINS1-203ENST00000559169 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
LINS1-203ENST00000559169 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
LINS1-203ENST00000559169 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
LINS1-203ENST00000559169 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
LINS1-203ENST00000559169 SLC4A1APQ9BWU0 796 aaKnown RBP12.99□□□□□ -0.33
LINS1-203ENST00000559169 NPM3O75607 178 aaKnown RBP12.96□□□□□ -0.33
LINS1-203ENST00000559169 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
LINS1-203ENST00000559169 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
LINS1-203ENST00000559169 ZBTB22O15209 634 aa12.78□□□□□ -0.36
LINS1-203ENST00000559169 CNKSR2Q8WXI2 1034 aa12.65□□□□□ -0.38
LINS1-203ENST00000559169 MSH5O43196 834 aa12.57□□□□□ -0.4
LINS1-203ENST00000559169 SCAF1Q9H7N4 1312 aaKnown RBP12.5□□□□□ -0.41
LINS1-203ENST00000559169 CCDC180Q9P1Z9 1646 aa12.28□□□□□ -0.44
LINS1-203ENST00000559169 RNF216Q9NWF9 866 aaPredicted RBP12.28□□□□□ -0.44
LINS1-203ENST00000559169 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
LINS1-203ENST00000559169 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
LINS1-203ENST00000559169 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
LINS1-203ENST00000559169 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
LINS1-203ENST00000559169 DMRT2Q9Y5R5 561 aa12.2□□□□□ -0.46
LINS1-203ENST00000559169 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
LINS1-203ENST00000559169 DNAJC5BQ9UF47 199 aa12.13□□□□□ -0.47
LINS1-203ENST00000559169 ZCCHC6Q5VYS8 1495 aaKnown RBP12.05□□□□□ -0.48
LINS1-203ENST00000559169 ABCC9O60706 1549 aa11.94□□□□□ -0.5
LINS1-203ENST00000559169 DCAF8L1A6NGE4 600 aa11.81□□□□□ -0.52
LINS1-203ENST00000559169 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
LINS1-203ENST00000559169 SUPT5HO00267 1087 aaKnown RBP11.76□□□□□ -0.53
LINS1-203ENST00000559169 MYCNP04198 464 aaPredicted RBP11.76□□□□□ -0.53
LINS1-203ENST00000559169 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
LINS1-203ENST00000559169 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
LINS1-203ENST00000559169 FKBP8Q14318 412 aa11.66□□□□□ -0.54
LINS1-203ENST00000559169 DCAF1Q9Y4B6 1507 aa11.61□□□□□ -0.55
LINS1-203ENST00000559169 U3KPZ7 1027 aaPredicted RBP11.6□□□□□ -0.55
LINS1-203ENST00000559169 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINS1-203ENST00000559169 ATXN8OSP0DMR3 200 aa11.57□□□□□ -0.56
LINS1-203ENST00000559169 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
LINS1-203ENST00000559169 NACADO15069 1562 aa11.44□□□□□ -0.58
LINS1-203ENST00000559169 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINS1-203ENST00000559169 RB1CC1Q8TDY2 1594 aa11.38□□□□□ -0.59
LINS1-203ENST00000559169 UNC13AQ9UPW8 1703 aa11.37□□□□□ -0.59
LINS1-203ENST00000559169 MYO15BQ96JP2 1530 aa11.36□□□□□ -0.59
LINS1-203ENST00000559169 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
LINS1-203ENST00000559169 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
LINS1-203ENST00000559169 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
LINS1-203ENST00000559169 ZNF219Q9P2Y4 722 aaPredicted RBP11.26□□□□□ -0.61
LINS1-203ENST00000559169 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
LINS1-203ENST00000559169 RSF1Q96T23 1441 aaPredicted RBP11.25□□□□□ -0.61
LINS1-203ENST00000559169 MROH2BQ7Z745 1585 aa11.23□□□□□ -0.61
LINS1-203ENST00000559169 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
LINS1-203ENST00000559169 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
LINS1-203ENST00000559169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
LINS1-203ENST00000559169 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
LINS1-203ENST00000559169 WIZO95785 1651 aa11.19□□□□□ -0.62
LINS1-203ENST00000559169 BICRAQ9NZM4 1560 aa11.18□□□□□ -0.62
LINS1-203ENST00000559169 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
LINS1-203ENST00000559169 POLA2Q14181 598 aa11.07□□□□□ -0.64
LINS1-203ENST00000559169 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
LINS1-203ENST00000559169 SMARCA4P51532 1647 aa11.03□□□□□ -0.64
LINS1-203ENST00000559169 RNF39Q9H2S5 420 aa11.03□□□□□ -0.64
LINS1-203ENST00000559169 BAZ1AQ9NRL2 1556 aaPredicted RBP11□□□□□ -0.65
LINS1-203ENST00000559169 ABCB7O75027 752 aa11□□□□□ -0.65
LINS1-203ENST00000559169 CAPN15O75808 1086 aa10.99□□□□□ -0.65
LINS1-203ENST00000559169 FAM9AQ8IZU1 332 aaPredicted RBP10.95□□□□□ -0.66
LINS1-203ENST00000559169 LOC105371045A0A1W2PR82 267 aa10.94□□□□□ -0.66
LINS1-203ENST00000559169 PROM2Q8N271 834 aa10.89□□□□□ -0.67
LINS1-203ENST00000559169 CCDC88BA6NC98 1476 aa10.88□□□□□ -0.67
LINS1-203ENST00000559169 IFNLR1Q8IU57 520 aaPredicted RBP10.88□□□□□ -0.67
LINS1-203ENST00000559169 TOP2AP11388 1531 aaKnown RBP10.87□□□□□ -0.67
LINS1-203ENST00000559169 TRIM41Q8WV44 630 aa10.86□□□□□ -0.67
LINS1-203ENST00000559169 SMARCA2P51531 1590 aa10.85□□□□□ -0.67
LINS1-203ENST00000559169 VASPP50552 380 aaPredicted RBP10.85□□□□□ -0.67
LINS1-203ENST00000559169 ABCC8Q09428 1581 aa10.85□□□□□ -0.67
LINS1-203ENST00000559169 ATAD2BQ9ULI0 1458 aa10.82□□□□□ -0.68
LINS1-203ENST00000559169 APLP2Q06481 763 aa10.82□□□□□ -0.68
LINS1-203ENST00000559169 EIF4G1Q04637 1599 aaKnown RBP10.81□□□□□ -0.68
LINS1-203ENST00000559169 FBLN2P98095 1184 aa10.8□□□□□ -0.68
LINS1-203ENST00000559169 BAZ1BQ9UIG0 1483 aaKnown RBP10.78□□□□□ -0.68
LINS1-203ENST00000559169 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
LINS1-203ENST00000559169 C1QBPQ07021 282 aaKnown RBP10.74□□□□□ -0.69
LINS1-203ENST00000559169 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
LINS1-203ENST00000559169 PEG3Q9GZU2 1588 aa10.73□□□□□ -0.69
LINS1-203ENST00000559169 DSG3P32926 999 aa10.71□□□□□ -0.69
LINS1-203ENST00000559169 PKD2Q13563 968 aa10.71□□□□□ -0.69
LINS1-203ENST00000559169 CC2D2AQ9P2K1 1620 aa10.68□□□□□ -0.7
LINS1-203ENST00000559169 RUSC2Q8N2Y8 1516 aa10.66□□□□□ -0.7
LINS1-203ENST00000559169 SOGA1O94964 1423 aa10.63□□□□□ -0.71
LINS1-203ENST00000559169 SYNJ1O43426 1573 aa10.61□□□□□ -0.71
LINS1-203ENST00000559169 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
LINS1-203ENST00000559169 ZNF692Q9BU19 519 aaPredicted RBP10.6□□□□□ -0.71
LINS1-203ENST00000559169 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
LINS1-203ENST00000559169 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms