RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 ERICH3Q5RHP9 1530 aa13.66□□□□□ -0.22
COPS2-206ENST00000559016 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
COPS2-206ENST00000559016 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
COPS2-206ENST00000559016 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
COPS2-206ENST00000559016 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
COPS2-206ENST00000559016 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
COPS2-206ENST00000559016 POLA1P09884 1462 aaPredicted RBP13.59□□□□□ -0.23
COPS2-206ENST00000559016 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
COPS2-206ENST00000559016 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
COPS2-206ENST00000559016 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
COPS2-206ENST00000559016 CUX2O14529 1486 aa13.57□□□□□ -0.24
COPS2-206ENST00000559016 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
COPS2-206ENST00000559016 WDR97A6NE52 1622 aa13.56□□□□□ -0.24
COPS2-206ENST00000559016 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
COPS2-206ENST00000559016 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
COPS2-206ENST00000559016 IGF1RP08069 1367 aa13.52□□□□□ -0.25
COPS2-206ENST00000559016 CUL7Q14999 1698 aa13.5□□□□□ -0.25
COPS2-206ENST00000559016 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
COPS2-206ENST00000559016 TARBP1Q13395 1621 aaKnown RBP13.47□□□□□ -0.25
COPS2-206ENST00000559016 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
COPS2-206ENST00000559016 ZBTB22O15209 634 aa13.47□□□□□ -0.25
COPS2-206ENST00000559016 POLA2Q14181 598 aa13.47□□□□□ -0.25
COPS2-206ENST00000559016 WDR62O43379 1518 aa13.47□□□□□ -0.25
COPS2-206ENST00000559016 CARMIL1Q5VZK9 1371 aa13.46□□□□□ -0.25
COPS2-206ENST00000559016 TRIM26Q12899 539 aaPredicted RBP13.46□□□□□ -0.25
COPS2-206ENST00000559016 CLIP1P30622 1438 aa13.46□□□□□ -0.26
COPS2-206ENST00000559016 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
COPS2-206ENST00000559016 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
COPS2-206ENST00000559016 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
COPS2-206ENST00000559016 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
COPS2-206ENST00000559016 THOC2Q8NI27 1593 aaKnown RBP13.39□□□□□ -0.27
COPS2-206ENST00000559016 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
COPS2-206ENST00000559016 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
COPS2-206ENST00000559016 PBRM1Q86U86 1689 aa13.37□□□□□ -0.27
COPS2-206ENST00000559016 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
COPS2-206ENST00000559016 CTTNBP2Q8WZ74 1663 aa13.36□□□□□ -0.27
COPS2-206ENST00000559016 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.27
COPS2-206ENST00000559016 GRIN2BQ13224 1484 aa13.31□□□□□ -0.28
COPS2-206ENST00000559016 ARAP1Q96P48 1450 aa13.3□□□□□ -0.28
COPS2-206ENST00000559016 EFCAB5A4FU69 1503 aa13.3□□□□□ -0.28
COPS2-206ENST00000559016 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
COPS2-206ENST00000559016 ARHGAP35Q9NRY4 1499 aa13.29□□□□□ -0.28
COPS2-206ENST00000559016 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
COPS2-206ENST00000559016 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
COPS2-206ENST00000559016 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
COPS2-206ENST00000559016 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.298e-8■■■□□ 17.1
COPS2-206ENST00000559016 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
COPS2-206ENST00000559016 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
COPS2-206ENST00000559016 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
COPS2-206ENST00000559016 MAGI1Q96QZ7 1491 aaPredicted RBP13.22□□□□□ -0.29
COPS2-206ENST00000559016 SAMD9Q5K651 1589 aa13.2□□□□□ -0.3
COPS2-206ENST00000559016 RANGAP1P46060 587 aaPredicted RBP13.18□□□□□ -0.3
COPS2-206ENST00000559016 IQGAP2Q13576 1575 aa13.16□□□□□ -0.3
COPS2-206ENST00000559016 FMN1Q68DA7 1419 aa13.16□□□□□ -0.3
COPS2-206ENST00000559016 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
COPS2-206ENST00000559016 HRCP23327 699 aa13.14□□□□□ -0.31
COPS2-206ENST00000559016 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
COPS2-206ENST00000559016 GRIN2AQ12879 1464 aa13.14□□□□□ -0.31
COPS2-206ENST00000559016 FYCO1Q9BQS8 1478 aa13.13□□□□□ -0.31
COPS2-206ENST00000559016 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
COPS2-206ENST00000559016 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
COPS2-206ENST00000559016 TIAM1Q13009 1591 aa13.12□□□□□ -0.31
COPS2-206ENST00000559016 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
COPS2-206ENST00000559016 CASKIN1Q8WXD9 1431 aa13.12□□□□□ -0.31
COPS2-206ENST00000559016 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
COPS2-206ENST00000559016 PCF11O94913 1555 aaKnown RBP13.09□□□□□ -0.31
COPS2-206ENST00000559016 FHOD3Q2V2M9 1422 aa13.08□□□□□ -0.32
COPS2-206ENST00000559016 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
COPS2-206ENST00000559016 NUP160Q12769 1436 aa13.05□□□□□ -0.32
COPS2-206ENST00000559016 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
COPS2-206ENST00000559016 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
COPS2-206ENST00000559016 LRRC9Q6ZRR7 1453 aa13.04□□□□□ -0.32
COPS2-206ENST00000559016 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
COPS2-206ENST00000559016 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
COPS2-206ENST00000559016 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
COPS2-206ENST00000559016 P3H3Q8IVL6 736 aa13.02□□□□□ -0.33
COPS2-206ENST00000559016 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
COPS2-206ENST00000559016 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
COPS2-206ENST00000559016 KIAA0556O60303 1618 aa13.02□□□□□ -0.33
COPS2-206ENST00000559016 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
COPS2-206ENST00000559016 CCDC18Q5T9S5 1454 aa13.01□□□□□ -0.33
COPS2-206ENST00000559016 HECW1Q76N89 1606 aa13□□□□□ -0.33
COPS2-206ENST00000559016 DISP1Q96F81 1524 aa12.98□□□□□ -0.33
COPS2-206ENST00000559016 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
COPS2-206ENST00000559016 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
COPS2-206ENST00000559016 CARMIL2Q6F5E8 1435 aa12.96□□□□□ -0.33
COPS2-206ENST00000559016 CHD1O14646 1710 aa12.95□□□□□ -0.34
COPS2-206ENST00000559016 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
COPS2-206ENST00000559016 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
COPS2-206ENST00000559016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
COPS2-206ENST00000559016 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
COPS2-206ENST00000559016 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
COPS2-206ENST00000559016 FBLN2P98095 1184 aa12.92□□□□□ -0.34
COPS2-206ENST00000559016 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
COPS2-206ENST00000559016 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
COPS2-206ENST00000559016 RAPGEF6Q8TEU7 1601 aa12.91□□□□□ -0.34
COPS2-206ENST00000559016 ATP1B4Q9UN42 357 aaPredicted RBP12.91□□□□□ -0.34
COPS2-206ENST00000559016 EPRSP07814 1512 aaKnown RBP12.9□□□□□ -0.34
COPS2-206ENST00000559016 HAX1O00165 279 aa12.9□□□□□ -0.34
COPS2-206ENST00000559016 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms