RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 FBLN2P98095 1184 aa17.42■□□□□ 0.38
PSMA4-207ENST00000558635 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
PSMA4-207ENST00000558635 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
PSMA4-207ENST00000558635 IGF1RP08069 1367 aa17.41■□□□□ 0.38
PSMA4-207ENST00000558635 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
PSMA4-207ENST00000558635 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
PSMA4-207ENST00000558635 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
PSMA4-207ENST00000558635 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
PSMA4-207ENST00000558635 OSCARQ8IYS5 282 aa17.35■□□□□ 0.37
PSMA4-207ENST00000558635 ADAMTS12P58397 1594 aa17.34■□□□□ 0.37
PSMA4-207ENST00000558635 CARMIL1Q5VZK9 1371 aa17.31■□□□□ 0.36
PSMA4-207ENST00000558635 CHD1O14646 1710 aa17.31■□□□□ 0.36
PSMA4-207ENST00000558635 FAM9AQ8IZU1 332 aaPredicted RBP17.3■□□□□ 0.36
PSMA4-207ENST00000558635 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
PSMA4-207ENST00000558635 GRIN2AQ12879 1464 aa17.28■□□□□ 0.36
PSMA4-207ENST00000558635 EEA1Q15075 1411 aa17.28■□□□□ 0.36
PSMA4-207ENST00000558635 CUL7Q14999 1698 aa17.27■□□□□ 0.36
PSMA4-207ENST00000558635 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
PSMA4-207ENST00000558635 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
PSMA4-207ENST00000558635 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
PSMA4-207ENST00000558635 NUP160Q12769 1436 aa17.2■□□□□ 0.34
PSMA4-207ENST00000558635 CEP170Q5SW79 1584 aa17.18■□□□□ 0.34
PSMA4-207ENST00000558635 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
PSMA4-207ENST00000558635 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
PSMA4-207ENST00000558635 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
PSMA4-207ENST00000558635 KIAA0586Q9BVV6 1533 aa17.09■□□□□ 0.33
PSMA4-207ENST00000558635 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
PSMA4-207ENST00000558635 JPH4Q96JJ6 628 aa17.07■□□□□ 0.32
PSMA4-207ENST00000558635 KIF21BO75037 1637 aa17.06■□□□□ 0.32
PSMA4-207ENST00000558635 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
PSMA4-207ENST00000558635 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
PSMA4-207ENST00000558635 IQGAP2Q13576 1575 aa17.01■□□□□ 0.31
PSMA4-207ENST00000558635 SHROOM2Q13796 1616 aa17■□□□□ 0.31
PSMA4-207ENST00000558635 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
PSMA4-207ENST00000558635 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
PSMA4-207ENST00000558635 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
PSMA4-207ENST00000558635 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
PSMA4-207ENST00000558635 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
PSMA4-207ENST00000558635 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
PSMA4-207ENST00000558635 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
PSMA4-207ENST00000558635 CTTNBP2Q8WZ74 1663 aa16.96■□□□□ 0.31
PSMA4-207ENST00000558635 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
PSMA4-207ENST00000558635 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
PSMA4-207ENST00000558635 CARMIL2Q6F5E8 1435 aa16.91■□□□□ 0.3
PSMA4-207ENST00000558635 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
PSMA4-207ENST00000558635 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
PSMA4-207ENST00000558635 DISP1Q96F81 1524 aa16.9■□□□□ 0.3
PSMA4-207ENST00000558635 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
PSMA4-207ENST00000558635 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
PSMA4-207ENST00000558635 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
PSMA4-207ENST00000558635 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
PSMA4-207ENST00000558635 KIAA0556O60303 1618 aa16.84■□□□□ 0.29
PSMA4-207ENST00000558635 PTPRGP23470 1445 aa16.83■□□□□ 0.28
PSMA4-207ENST00000558635 SAMD9Q5K651 1589 aa16.8■□□□□ 0.28
PSMA4-207ENST00000558635 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
PSMA4-207ENST00000558635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
PSMA4-207ENST00000558635 CAPN15O75808 1086 aa16.78■□□□□ 0.28
PSMA4-207ENST00000558635 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
PSMA4-207ENST00000558635 EFCAB5A4FU69 1503 aa16.76■□□□□ 0.27
PSMA4-207ENST00000558635 FHOD3Q2V2M9 1422 aa16.75■□□□□ 0.27
PSMA4-207ENST00000558635 ARHGAP35Q9NRY4 1499 aa16.74■□□□□ 0.27
PSMA4-207ENST00000558635 CLIP1P30622 1438 aa16.73■□□□□ 0.27
PSMA4-207ENST00000558635 APLP2Q06481 763 aa16.72■□□□□ 0.27
PSMA4-207ENST00000558635 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
PSMA4-207ENST00000558635 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
PSMA4-207ENST00000558635 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
PSMA4-207ENST00000558635 SAMD1Q6SPF0 538 aaPredicted RBP16.68■□□□□ 0.26
PSMA4-207ENST00000558635 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
PSMA4-207ENST00000558635 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
PSMA4-207ENST00000558635 UHRF1BP1LA0JNW5 1464 aa16.67■□□□□ 0.26
PSMA4-207ENST00000558635 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
PSMA4-207ENST00000558635 ABCA8O94911 1581 aa16.65■□□□□ 0.26
PSMA4-207ENST00000558635 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
PSMA4-207ENST00000558635 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
PSMA4-207ENST00000558635 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
PSMA4-207ENST00000558635 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
PSMA4-207ENST00000558635 ARID3CA6NKF2 412 aa16.59■□□□□ 0.25
PSMA4-207ENST00000558635 DSG3P32926 999 aa16.59■□□□□ 0.25
PSMA4-207ENST00000558635 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
PSMA4-207ENST00000558635 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.24
PSMA4-207ENST00000558635 KDM5BQ9UGL1 1544 aa16.58■□□□□ 0.24
PSMA4-207ENST00000558635 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
PSMA4-207ENST00000558635 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
PSMA4-207ENST00000558635 ATP10BO94823 1461 aa16.54■□□□□ 0.24
PSMA4-207ENST00000558635 CASKIN1Q8WXD9 1431 aa16.53■□□□□ 0.24
PSMA4-207ENST00000558635 ZCCHC11Q5TAX3 1644 aaKnown RBP16.53■□□□□ 0.24
PSMA4-207ENST00000558635 MAPKBP1O60336 1514 aa16.52■□□□□ 0.24
PSMA4-207ENST00000558635 ASXL2Q76L83 1435 aa16.52■□□□□ 0.23
PSMA4-207ENST00000558635 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
PSMA4-207ENST00000558635 HECW1Q76N89 1606 aa16.5■□□□□ 0.23
PSMA4-207ENST00000558635 FYCO1Q9BQS8 1478 aa16.48■□□□□ 0.23
PSMA4-207ENST00000558635 EPRSP07814 1512 aaKnown RBP16.48■□□□□ 0.23
PSMA4-207ENST00000558635 VPS8Q8N3P4 1428 aa16.47■□□□□ 0.23
PSMA4-207ENST00000558635 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
PSMA4-207ENST00000558635 ZBTB22O15209 634 aa16.46■□□□□ 0.23
PSMA4-207ENST00000558635 FAM69CQ0P6D2 419 aa16.45■□□□□ 0.22
PSMA4-207ENST00000558635 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
PSMA4-207ENST00000558635 ABCC10Q5T3U5 1492 aa16.44■□□□□ 0.22
PSMA4-207ENST00000558635 PLEKHD1A6NEE1 506 aa16.44■□□□□ 0.22
PSMA4-207ENST00000558635 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms