RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
HMGB1P8-201ENST00000558211 CUX1P39880 1505 aa20.53■□□□□ 0.88
HMGB1P8-201ENST00000558211 SPDYE2BA6NHP3 402 aa20.52■□□□□ 0.88
HMGB1P8-201ENST00000558211 SPDYE6P0CI01 402 aa20.52■□□□□ 0.88
HMGB1P8-201ENST00000558211 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.88
HMGB1P8-201ENST00000558211 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.87
HMGB1P8-201ENST00000558211 SPDYE4A6NLX3 237 aa20.51■□□□□ 0.87
HMGB1P8-201ENST00000558211 CUX2O14529 1486 aa20.5■□□□□ 0.87
HMGB1P8-201ENST00000558211 RBM42Q9BTD8 480 aaKnown RBP20.46■□□□□ 0.87
HMGB1P8-201ENST00000558211 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
HMGB1P8-201ENST00000558211 SSUH2Q9Y2M2 353 aa20.42■□□□□ 0.86
HMGB1P8-201ENST00000558211 FGD5Q6ZNL6 1462 aa20.41■□□□□ 0.86
HMGB1P8-201ENST00000558211 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
HMGB1P8-201ENST00000558211 POLA1P09884 1462 aaPredicted RBP20.4■□□□□ 0.86
HMGB1P8-201ENST00000558211 ZNF692Q9BU19 519 aaPredicted RBP20.4■□□□□ 0.86
HMGB1P8-201ENST00000558211 BIVM-ERCC5R4GMW8 1640 aa20.4■□□□□ 0.86
HMGB1P8-201ENST00000558211 RAD54L2Q9Y4B4 1467 aa20.36■□□□□ 0.85
HMGB1P8-201ENST00000558211 SOGA1O94964 1423 aa20.36■□□□□ 0.85
HMGB1P8-201ENST00000558211 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
HMGB1P8-201ENST00000558211 IFT140Q96RY7 1462 aa20.33■□□□□ 0.85
HMGB1P8-201ENST00000558211 PROM2Q8N271 834 aa20.31■□□□□ 0.84
HMGB1P8-201ENST00000558211 TARBP1Q13395 1621 aaKnown RBP20.28■□□□□ 0.84
HMGB1P8-201ENST00000558211 ZNF608Q9ULD9 1512 aaPredicted RBP20.26■□□□□ 0.83
HMGB1P8-201ENST00000558211 AKT1S1Q96B36 256 aa20.25■□□□□ 0.83
HMGB1P8-201ENST00000558211 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
HMGB1P8-201ENST00000558211 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
HMGB1P8-201ENST00000558211 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
HMGB1P8-201ENST00000558211 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
HMGB1P8-201ENST00000558211 EIF4G3O43432 1585 aaKnown RBP20.16■□□□□ 0.82
HMGB1P8-201ENST00000558211 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
HMGB1P8-201ENST00000558211 ABCA5Q8WWZ7 1642 aa20.08■□□□□ 0.8
HMGB1P8-201ENST00000558211 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
HMGB1P8-201ENST00000558211 REM2Q8IYK8 340 aaPredicted RBP20.06■□□□□ 0.8
HMGB1P8-201ENST00000558211 PBRM1Q86U86 1689 aa20.05■□□□□ 0.8
HMGB1P8-201ENST00000558211 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
HMGB1P8-201ENST00000558211 RUSC2Q8N2Y8 1516 aa20.03■□□□□ 0.8
HMGB1P8-201ENST00000558211 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
HMGB1P8-201ENST00000558211 FAM9AQ8IZU1 332 aaPredicted RBP20■□□□□ 0.79
HMGB1P8-201ENST00000558211 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
HMGB1P8-201ENST00000558211 IGF1RP08069 1367 aa19.95■□□□□ 0.78
HMGB1P8-201ENST00000558211 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
HMGB1P8-201ENST00000558211 CHMP7Q8WUX9 453 aaPredicted RBP19.92■□□□□ 0.78
HMGB1P8-201ENST00000558211 CHD1O14646 1710 aa19.88■□□□□ 0.77
HMGB1P8-201ENST00000558211 SPDYE1Q8NFV5 336 aaPredicted RBP19.88■□□□□ 0.77
HMGB1P8-201ENST00000558211 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
HMGB1P8-201ENST00000558211 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
HMGB1P8-201ENST00000558211 FHAD1B1AJZ9 1412 aa19.86■□□□□ 0.77
HMGB1P8-201ENST00000558211 CARMIL1Q5VZK9 1371 aa19.85■□□□□ 0.77
HMGB1P8-201ENST00000558211 EEA1Q15075 1411 aa19.85■□□□□ 0.77
HMGB1P8-201ENST00000558211 CUL7Q14999 1698 aa19.84■□□□□ 0.77
HMGB1P8-201ENST00000558211 PITPNM1O00562 1244 aa19.83■□□□□ 0.77
HMGB1P8-201ENST00000558211 STAG3Q9UJ98 1225 aa19.82■□□□□ 0.76
HMGB1P8-201ENST00000558211 FBXO3Q9UK99 471 aa19.8■□□□□ 0.76
HMGB1P8-201ENST00000558211 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
HMGB1P8-201ENST00000558211 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
HMGB1P8-201ENST00000558211 CLEC11AQ9Y240 323 aa19.73■□□□□ 0.75
HMGB1P8-201ENST00000558211 PRXQ9BXM0 1461 aa19.72■□□□□ 0.75
HMGB1P8-201ENST00000558211 CEP170Q5SW79 1584 aa19.69■□□□□ 0.74
HMGB1P8-201ENST00000558211 NUP160Q12769 1436 aa19.66■□□□□ 0.74
HMGB1P8-201ENST00000558211 KIF21BO75037 1637 aa19.63■□□□□ 0.73
HMGB1P8-201ENST00000558211 CHRDL2Q6WN34 429 aa19.62■□□□□ 0.73
HMGB1P8-201ENST00000558211 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
HMGB1P8-201ENST00000558211 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
HMGB1P8-201ENST00000558211 PRR29P0C7W0 189 aa19.59■□□□□ 0.73
HMGB1P8-201ENST00000558211 GOLGA3Q08378 1498 aa19.57■□□□□ 0.72
HMGB1P8-201ENST00000558211 VASPP50552 380 aaPredicted RBP19.57■□□□□ 0.72
HMGB1P8-201ENST00000558211 DNAJC5Q9H3Z4 198 aa19.57■□□□□ 0.72
HMGB1P8-201ENST00000558211 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
HMGB1P8-201ENST00000558211 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
HMGB1P8-201ENST00000558211 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
HMGB1P8-201ENST00000558211 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
HMGB1P8-201ENST00000558211 LOC105371045A0A1W2PR82 267 aa19.52■□□□□ 0.72
HMGB1P8-201ENST00000558211 IQGAP2Q13576 1575 aa19.52■□□□□ 0.71
HMGB1P8-201ENST00000558211 FXR2P51116 673 aaKnown RBP eCLIP19.49■□□□□ 0.71
HMGB1P8-201ENST00000558211 PRG4Q92954 1404 aaPredicted RBP19.46■□□□□ 0.71
HMGB1P8-201ENST00000558211 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
HMGB1P8-201ENST00000558211 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
HMGB1P8-201ENST00000558211 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
HMGB1P8-201ENST00000558211 CREBZFQ9NS37 354 aa19.43■□□□□ 0.7
HMGB1P8-201ENST00000558211 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
HMGB1P8-201ENST00000558211 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
HMGB1P8-201ENST00000558211 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
HMGB1P8-201ENST00000558211 TTBK1Q5TCY1 1321 aaPredicted RBP19.42■□□□□ 0.7
HMGB1P8-201ENST00000558211 PIP4P2Q8N4L2 257 aa19.41■□□□□ 0.7
HMGB1P8-201ENST00000558211 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
HMGB1P8-201ENST00000558211 MIER1Q8N108 512 aa19.4■□□□□ 0.7
HMGB1P8-201ENST00000558211 UGGT2Q9NYU1 1516 aa19.39■□□□□ 0.69
HMGB1P8-201ENST00000558211 CARMIL2Q6F5E8 1435 aa19.38■□□□□ 0.69
HMGB1P8-201ENST00000558211 TNIKQ9UKE5 1360 aa19.38■□□□□ 0.69
HMGB1P8-201ENST00000558211 PLCD3Q8N3E9 789 aa19.36■□□□□ 0.69
HMGB1P8-201ENST00000558211 DISP1Q96F81 1524 aa19.35■□□□□ 0.69
HMGB1P8-201ENST00000558211 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
HMGB1P8-201ENST00000558211 IFNLR1Q8IU57 520 aaPredicted RBP19.33■□□□□ 0.68
HMGB1P8-201ENST00000558211 KIAA0556O60303 1618 aa19.33■□□□□ 0.68
HMGB1P8-201ENST00000558211 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
HMGB1P8-201ENST00000558211 CHADLQ6NUI6 762 aa19.31■□□□□ 0.68
HMGB1P8-201ENST00000558211 PRKAR2AP13861 404 aaKnown RBP19.3■□□□□ 0.68
HMGB1P8-201ENST00000558211 MNX1P50219 401 aaPredicted RBP19.29■□□□□ 0.68
HMGB1P8-201ENST00000558211 SAMD9Q5K651 1589 aa19.27■□□□□ 0.68
HMGB1P8-201ENST00000558211 PTPRGP23470 1445 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms