RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 NPM2Q86SE8 214 aaKnown RBP14.97□□□□□ -0.01
SUPT16H-207ENST00000557394 PKNOX2Q96KN3 472 aa14.97□□□□□ -0.01
SUPT16H-207ENST00000557394 SOGA1O94964 1423 aa14.94□□□□□ -0.02
SUPT16H-207ENST00000557394 GOLGA3Q08378 1498 aa14.94□□□□□ -0.02
SUPT16H-207ENST00000557394 MSH5O43196 834 aa14.92□□□□□ -0.02
SUPT16H-207ENST00000557394 DHX57Q6P158 1386 aaKnown RBP14.92□□□□□ -0.02
SUPT16H-207ENST00000557394 FKBP8Q14318 412 aa14.91□□□□□ -0.02
SUPT16H-207ENST00000557394 TPRNQ4KMQ1 711 aa14.91□□□□□ -0.02
SUPT16H-207ENST00000557394 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
SUPT16H-207ENST00000557394 BCANQ96GW7 911 aa14.9□□□□□ -0.02
SUPT16H-207ENST00000557394 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
SUPT16H-207ENST00000557394 PDE4CQ08493 712 aa14.88□□□□□ -0.03
SUPT16H-207ENST00000557394 FANCIQ9NVI1 1328 aa14.88□□□□□ -0.03
SUPT16H-207ENST00000557394 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
SUPT16H-207ENST00000557394 UBTFP17480 764 aaKnown RBP14.86□□□□□ -0.03
SUPT16H-207ENST00000557394 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
SUPT16H-207ENST00000557394 KIF21AQ7Z4S6 1674 aa14.86□□□□□ -0.03
SUPT16H-207ENST00000557394 CEP164Q9UPV0 1460 aa14.85□□□□□ -0.03
SUPT16H-207ENST00000557394 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
SUPT16H-207ENST00000557394 RUSC2Q8N2Y8 1516 aa14.84□□□□□ -0.03
SUPT16H-207ENST00000557394 SYNJ1O43426 1573 aa14.84□□□□□ -0.03
SUPT16H-207ENST00000557394 C14orf37Q86TY3 774 aa14.83□□□□□ -0.03
SUPT16H-207ENST00000557394 BIVM-ERCC5R4GMW8 1640 aa14.83□□□□□ -0.04
SUPT16H-207ENST00000557394 KCNH8Q96L42 1107 aa14.83□□□□□ -0.04
SUPT16H-207ENST00000557394 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
SUPT16H-207ENST00000557394 CLIP1P30622 1438 aa14.81□□□□□ -0.04
SUPT16H-207ENST00000557394 CUX1P39880 1505 aa14.8□□□□□ -0.04
SUPT16H-207ENST00000557394 NEFLP07196 543 aa14.79□□□□□ -0.04
SUPT16H-207ENST00000557394 KIF21BO75037 1637 aa14.79□□□□□ -0.04
SUPT16H-207ENST00000557394 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.04
SUPT16H-207ENST00000557394 PPP6R1Q9UPN7 881 aa14.77□□□□□ -0.05
SUPT16H-207ENST00000557394 CUX2O14529 1486 aa14.74□□□□□ -0.05
SUPT16H-207ENST00000557394 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
SUPT16H-207ENST00000557394 URB2Q14146 1524 aaKnown RBP14.73□□□□□ -0.05
SUPT16H-207ENST00000557394 TOPBP1Q92547 1522 aa14.73□□□□□ -0.05
SUPT16H-207ENST00000557394 MRC2Q9UBG0 1479 aa14.73□□□□□ -0.05
SUPT16H-207ENST00000557394 ADRA2BP18089 450 aa14.71□□□□□ -0.05
SUPT16H-207ENST00000557394 ITGAEP38570 1179 aa14.7□□□□□ -0.06
SUPT16H-207ENST00000557394 DEKP35659 375 aaKnown RBP14.69□□□□□ -0.06
SUPT16H-207ENST00000557394 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
SUPT16H-207ENST00000557394 THOC2Q8NI27 1593 aaKnown RBP14.68□□□□□ -0.06
SUPT16H-207ENST00000557394 CHMP4AQ9BY43 222 aa14.67□□□□□ -0.06
SUPT16H-207ENST00000557394 WDR62O43379 1518 aa14.67□□□□□ -0.06
SUPT16H-207ENST00000557394 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
SUPT16H-207ENST00000557394 CCER2I3L3R5 266 aa14.66□□□□□ -0.06
SUPT16H-207ENST00000557394 RRBP1Q9P2E9 1410 aaKnown RBP14.65□□□□□ -0.06
SUPT16H-207ENST00000557394 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
SUPT16H-207ENST00000557394 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
SUPT16H-207ENST00000557394 CDK11AQ9UQ88 783 aaPredicted RBP14.63□□□□□ -0.07
SUPT16H-207ENST00000557394 PPP1R15AO75807 674 aaPredicted RBP14.62□□□□□ -0.07
SUPT16H-207ENST00000557394 ERICH6BQ5W0A0 696 aa14.61□□□□□ -0.07
SUPT16H-207ENST00000557394 BCL11BQ9C0K0 894 aaPredicted RBP14.61□□□□□ -0.07
SUPT16H-207ENST00000557394 DHX37Q8IY37 1157 aaKnown RBP14.6□□□□□ -0.07
SUPT16H-207ENST00000557394 TAF7LQ5H9L4 462 aa14.59□□□□□ -0.07
SUPT16H-207ENST00000557394 MAPKBP1O60336 1514 aa14.58□□□□□ -0.07
SUPT16H-207ENST00000557394 DDX10Q13206 875 aaKnown RBP14.58□□□□□ -0.08
SUPT16H-207ENST00000557394 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
SUPT16H-207ENST00000557394 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
SUPT16H-207ENST00000557394 TRIM52Q96A61 297 aa14.55□□□□□ -0.08
SUPT16H-207ENST00000557394 RAD54L2Q9Y4B4 1467 aa14.55□□□□□ -0.08
SUPT16H-207ENST00000557394 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
SUPT16H-207ENST00000557394 RAPGEF2Q9Y4G8 1499 aa14.54□□□□□ -0.08
SUPT16H-207ENST00000557394 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
SUPT16H-207ENST00000557394 KIF27Q86VH2 1401 aa14.53□□□□□ -0.08
SUPT16H-207ENST00000557394 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
SUPT16H-207ENST00000557394 IFT140Q96RY7 1462 aa14.52□□□□□ -0.09
SUPT16H-207ENST00000557394 FGD1P98174 961 aa14.51□□□□□ -0.09
SUPT16H-207ENST00000557394 ANP32CO43423 234 aa14.5□□□□□ -0.09
SUPT16H-207ENST00000557394 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
SUPT16H-207ENST00000557394 KANK4Q5T7N3 995 aaPredicted RBP14.48□□□□□ -0.09
SUPT16H-207ENST00000557394 CCNB3Q8WWL7 1395 aa14.48□□□□□ -0.09
SUPT16H-207ENST00000557394 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
SUPT16H-207ENST00000557394 BRD2P25440 801 aaKnown RBP14.47□□□□□ -0.09
SUPT16H-207ENST00000557394 RAB3GAP2Q9H2M9 1393 aa14.46□□□□□ -0.09
SUPT16H-207ENST00000557394 NOP58Q9Y2X3 529 aaKnown RBP14.46□□□□□ -0.09
SUPT16H-207ENST00000557394 SALL2Q9Y467 1007 aaPredicted RBP14.46□□□□□ -0.1
SUPT16H-207ENST00000557394 PPP4R2Q9NY27 417 aa14.45□□□□□ -0.1
SUPT16H-207ENST00000557394 GAPVD1Q14C86 1478 aa14.42□□□□□ -0.1
SUPT16H-207ENST00000557394 TDRD9Q8NDG6 1382 aaKnown RBP14.42□□□□□ -0.1
SUPT16H-207ENST00000557394 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
SUPT16H-207ENST00000557394 PBRM1Q86U86 1689 aa14.41□□□□□ -0.1
SUPT16H-207ENST00000557394 ZNF608Q9ULD9 1512 aaPredicted RBP14.4□□□□□ -0.1
SUPT16H-207ENST00000557394 IGF1RP08069 1367 aa14.4□□□□□ -0.1
SUPT16H-207ENST00000557394 EIF4G3O43432 1585 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-207ENST00000557394 CUL7Q14999 1698 aa14.38□□□□□ -0.11
SUPT16H-207ENST00000557394 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
SUPT16H-207ENST00000557394 TMEM132AQ24JP5 1023 aa14.38□□□□□ -0.11
SUPT16H-207ENST00000557394 IRX6P78412 446 aaPredicted RBP14.38□□□□□ -0.11
SUPT16H-207ENST00000557394 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
SUPT16H-207ENST00000557394 SETD5Q9C0A6 1442 aa14.38□□□□□ -0.11
SUPT16H-207ENST00000557394 AQRO60306 1485 aaKnown RBP eCLIP14.37□□□□□ -0.111e-16■□□□□ 9.1
SUPT16H-207ENST00000557394 NBR1Q14596 966 aa14.37□□□□□ -0.11
SUPT16H-207ENST00000557394 GRIN2BQ13224 1484 aa14.35□□□□□ -0.11
SUPT16H-207ENST00000557394 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
SUPT16H-207ENST00000557394 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
SUPT16H-207ENST00000557394 SIN3AQ96ST3 1273 aa14.33□□□□□ -0.11
SUPT16H-207ENST00000557394 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
SUPT16H-207ENST00000557394 CARMIL1Q5VZK9 1371 aa14.32□□□□□ -0.12
SUPT16H-207ENST00000557394 A0A0U1RQG5 324 aaPredicted RBP14.31□□□□□ -0.12
SUPT16H-207ENST00000557394 ADAMTS12P58397 1594 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms