RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 DDX10Q13206 875 aaKnown RBP22.02■■□□□ 1.12
TMEM55B-207ENST00000557041 HMGXB3Q12766 1538 aa22.01■■□□□ 1.11
TMEM55B-207ENST00000557041 MTUS2Q5JR59 1369 aa22.01■■□□□ 1.11
TMEM55B-207ENST00000557041 ARHGAP35Q9NRY4 1499 aa21.98■■□□□ 1.11
TMEM55B-207ENST00000557041 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
TMEM55B-207ENST00000557041 RRP7BPQ9NSQ0 103 aa21.97■■□□□ 1.11
TMEM55B-207ENST00000557041 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
TMEM55B-207ENST00000557041 RAB3GAP2Q9H2M9 1393 aa21.94■■□□□ 1.1
TMEM55B-207ENST00000557041 POLR3GLQ9BT43 218 aa21.91■■□□□ 1.1
TMEM55B-207ENST00000557041 ZNF777Q9ULD5 760 aaPredicted RBP21.89■■□□□ 1.09
TMEM55B-207ENST00000557041 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
TMEM55B-207ENST00000557041 BCANQ96GW7 911 aa21.85■■□□□ 1.09
TMEM55B-207ENST00000557041 PHLDB1Q86UU1 1377 aa21.84■■□□□ 1.09
TMEM55B-207ENST00000557041 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.09
TMEM55B-207ENST00000557041 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
TMEM55B-207ENST00000557041 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
TMEM55B-207ENST00000557041 KCNH8Q96L42 1107 aa21.78■■□□□ 1.08
TMEM55B-207ENST00000557041 TONSLQ96HA7 1378 aa21.77■■□□□ 1.08
TMEM55B-207ENST00000557041 SETD5Q9C0A6 1442 aa21.77■■□□□ 1.08
TMEM55B-207ENST00000557041 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
TMEM55B-207ENST00000557041 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
TMEM55B-207ENST00000557041 PELP1Q8IZL8 1130 aaKnown RBP21.73■■□□□ 1.07
TMEM55B-207ENST00000557041 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
TMEM55B-207ENST00000557041 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
TMEM55B-207ENST00000557041 FOXD1Q16676 465 aa21.72■■□□□ 1.07
TMEM55B-207ENST00000557041 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
TMEM55B-207ENST00000557041 ANP32CO43423 234 aa21.69■■□□□ 1.06
TMEM55B-207ENST00000557041 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
TMEM55B-207ENST00000557041 LRRC9Q6ZRR7 1453 aa21.67■■□□□ 1.06
TMEM55B-207ENST00000557041 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.064e-8■■■■■ 34.1
TMEM55B-207ENST00000557041 GAPVD1Q14C86 1478 aa21.63■■□□□ 1.05
TMEM55B-207ENST00000557041 NEFLP07196 543 aa21.6■■□□□ 1.05
TMEM55B-207ENST00000557041 FMN1Q68DA7 1419 aa21.6■■□□□ 1.05
TMEM55B-207ENST00000557041 CDK11AQ9UQ88 783 aaPredicted RBP21.56■■□□□ 1.04
TMEM55B-207ENST00000557041 PPP1R15AO75807 674 aaPredicted RBP21.53■■□□□ 1.04
TMEM55B-207ENST00000557041 TIAM1Q13009 1591 aa21.53■■□□□ 1.04
TMEM55B-207ENST00000557041 SENP3-EIF4A1A0A087X0R7 540 aa21.53■■□□□ 1.04
TMEM55B-207ENST00000557041 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
TMEM55B-207ENST00000557041 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
TMEM55B-207ENST00000557041 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
TMEM55B-207ENST00000557041 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
TMEM55B-207ENST00000557041 FKBP8Q14318 412 aa21.49■■□□□ 1.03
TMEM55B-207ENST00000557041 ABCA10Q8WWZ4 1543 aa21.49■■□□□ 1.03
TMEM55B-207ENST00000557041 ZNF644Q9H582 1327 aaPredicted RBP21.48■■□□□ 1.03
TMEM55B-207ENST00000557041 CFDP1Q9UEE9 299 aaPredicted RBP21.48■■□□□ 1.03
TMEM55B-207ENST00000557041 PCF11O94913 1555 aaKnown RBP21.47■■□□□ 1.03
TMEM55B-207ENST00000557041 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
TMEM55B-207ENST00000557041 FGD6Q6ZV73 1430 aa21.45■■□□□ 1.02
TMEM55B-207ENST00000557041 CASKIN1Q8WXD9 1431 aa21.45■■□□□ 1.02
TMEM55B-207ENST00000557041 HNRNPUQ00839 825 aaKnown RBP eCLIP21.43■■□□□ 1.02
TMEM55B-207ENST00000557041 KDM2AQ9Y2K7 1162 aa21.42■■□□□ 1.02
TMEM55B-207ENST00000557041 IRX6P78412 446 aaPredicted RBP21.4■■□□□ 1.02
TMEM55B-207ENST00000557041 FAM9BQ8IZU0 186 aa21.4■■□□□ 1.02
TMEM55B-207ENST00000557041 MPHOSPH9Q99550 1183 aa21.39■■□□□ 1.01
TMEM55B-207ENST00000557041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.38■■□□□ 1.01
TMEM55B-207ENST00000557041 SUPT16HQ9Y5B9 1047 aaKnown RBP21.37■■□□□ 1.01
TMEM55B-207ENST00000557041 NCOA2Q15596 1464 aa21.36■■□□□ 1.01
TMEM55B-207ENST00000557041 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
TMEM55B-207ENST00000557041 CCDC18Q5T9S5 1454 aa21.36■■□□□ 1.01
TMEM55B-207ENST00000557041 FYCO1Q9BQS8 1478 aa21.35■■□□□ 1.01
TMEM55B-207ENST00000557041 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
TMEM55B-207ENST00000557041 HSPA5P11021 654 aaKnown RBP21.34■■□□□ 1.01
TMEM55B-207ENST00000557041 L3MBTL2Q969R5 705 aa21.34■■□□□ 1.01
TMEM55B-207ENST00000557041 JPH4Q96JJ6 628 aa21.31■■□□□ 1
TMEM55B-207ENST00000557041 WDR97A6NE52 1622 aa21.31■■□□□ 1
TMEM55B-207ENST00000557041 MYOM3Q5VTT5 1437 aa21.31■■□□□ 1
TMEM55B-207ENST00000557041 TSPY4P0CV99 314 aa21.29■■□□□ 1
TMEM55B-207ENST00000557041 TSPY10P0CW01 314 aa21.29■■□□□ 1
TMEM55B-207ENST00000557041 PTPRKQ15262 1439 aa21.28■■□□□ 1
TMEM55B-207ENST00000557041 TIMELESSQ9UNS1 1208 aa21.28■■□□□ 1
TMEM55B-207ENST00000557041 ZNF608Q9ULD9 1512 aaPredicted RBP21.26■□□□□ 0.99
TMEM55B-207ENST00000557041 RGL3Q3MIN7 710 aa21.26■□□□□ 0.99
TMEM55B-207ENST00000557041 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
TMEM55B-207ENST00000557041 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
TMEM55B-207ENST00000557041 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
TMEM55B-207ENST00000557041 EFCAB5A4FU69 1503 aa21.23■□□□□ 0.99
TMEM55B-207ENST00000557041 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
TMEM55B-207ENST00000557041 PKD2Q13563 968 aa21.2■□□□□ 0.98
TMEM55B-207ENST00000557041 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.98
TMEM55B-207ENST00000557041 SALL2Q9Y467 1007 aaPredicted RBP21.19■□□□□ 0.98
TMEM55B-207ENST00000557041 NAIPQ13075 1403 aa21.17■□□□□ 0.98
TMEM55B-207ENST00000557041 UACAQ9BZF9 1416 aa21.17■□□□□ 0.98
TMEM55B-207ENST00000557041 GRIN2BQ13224 1484 aa21.17■□□□□ 0.98
TMEM55B-207ENST00000557041 MAP3K1Q13233 1512 aa21.17■□□□□ 0.98
TMEM55B-207ENST00000557041 MRC2Q9UBG0 1479 aa21.14■□□□□ 0.97
TMEM55B-207ENST00000557041 CUL7Q14999 1698 aa21.14■□□□□ 0.97
TMEM55B-207ENST00000557041 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
TMEM55B-207ENST00000557041 HFM1A2PYH4 1435 aa21.13■□□□□ 0.97
TMEM55B-207ENST00000557041 SNAPC4Q5SXM2 1469 aa21.12■□□□□ 0.97
TMEM55B-207ENST00000557041 PRG4Q92954 1404 aaPredicted RBP21.12■□□□□ 0.97
TMEM55B-207ENST00000557041 EPRSP07814 1512 aaKnown RBP21.09■□□□□ 0.97
TMEM55B-207ENST00000557041 KIF21AQ7Z4S6 1674 aa21.08■□□□□ 0.96
TMEM55B-207ENST00000557041 DCAF11Q8TEB1 546 aa21.08■□□□□ 0.96
TMEM55B-207ENST00000557041 NBPF8Q3BBV2 869 aa21.06■□□□□ 0.96
TMEM55B-207ENST00000557041 CARD11Q9BXL7 1154 aa21.06■□□□□ 0.96
TMEM55B-207ENST00000557041 WASHC2AQ641Q2 1341 aa21.06■□□□□ 0.96
TMEM55B-207ENST00000557041 NUP155O75694 1391 aa21.05■□□□□ 0.96
TMEM55B-207ENST00000557041 CARMIL2Q6F5E8 1435 aa21.05■□□□□ 0.96
TMEM55B-207ENST00000557041 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
TMEM55B-207ENST00000557041 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms