RNA–Protein interactions for RNA: ENST00000556467.5

CASC1-211, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-211ENST00000556467 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
CASC1-211ENST00000556467 PBRM1Q86U86 1689 aa12.52□□□□□ -0.4
CASC1-211ENST00000556467 MAGI1Q96QZ7 1491 aaPredicted RBP12.52□□□□□ -0.41
CASC1-211ENST00000556467 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
CASC1-211ENST00000556467 TRIM41Q8WV44 630 aa12.51□□□□□ -0.41
CASC1-211ENST00000556467 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
CASC1-211ENST00000556467 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
CASC1-211ENST00000556467 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
CASC1-211ENST00000556467 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
CASC1-211ENST00000556467 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
CASC1-211ENST00000556467 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
CASC1-211ENST00000556467 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
CASC1-211ENST00000556467 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
CASC1-211ENST00000556467 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
CASC1-211ENST00000556467 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
CASC1-211ENST00000556467 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
CASC1-211ENST00000556467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
CASC1-211ENST00000556467 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
CASC1-211ENST00000556467 ARHGEF11O15085 1522 aa12.45□□□□□ -0.42
CASC1-211ENST00000556467 KCNA4P22459 653 aa12.4□□□□□ -0.42
CASC1-211ENST00000556467 ERICH3Q5RHP9 1530 aa12.39□□□□□ -0.43
CASC1-211ENST00000556467 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
CASC1-211ENST00000556467 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
CASC1-211ENST00000556467 ADAMTS12P58397 1594 aa12.36□□□□□ -0.43
CASC1-211ENST00000556467 CYB5RLQ6IPT4 315 aa12.36□□□□□ -0.43
CASC1-211ENST00000556467 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
CASC1-211ENST00000556467 GRIN2AQ12879 1464 aa12.35□□□□□ -0.43
CASC1-211ENST00000556467 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
CASC1-211ENST00000556467 ABCB7O75027 752 aa12.31□□□□□ -0.44
CASC1-211ENST00000556467 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
CASC1-211ENST00000556467 KIF27Q86VH2 1401 aa12.3□□□□□ -0.44
CASC1-211ENST00000556467 NUP160Q12769 1436 aa12.28□□□□□ -0.44
CASC1-211ENST00000556467 CEP170Q5SW79 1584 aa12.28□□□□□ -0.44
CASC1-211ENST00000556467 CUL7Q14999 1698 aa12.28□□□□□ -0.44
CASC1-211ENST00000556467 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
CASC1-211ENST00000556467 SHROOM2Q13796 1616 aa12.24□□□□□ -0.45
CASC1-211ENST00000556467 IGF1RP08069 1367 aa12.22□□□□□ -0.45
CASC1-211ENST00000556467 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
CASC1-211ENST00000556467 RUSC2Q8N2Y8 1516 aa12.18□□□□□ -0.46
CASC1-211ENST00000556467 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
CASC1-211ENST00000556467 PRG4Q92954 1404 aaPredicted RBP12.17□□□□□ -0.46
CASC1-211ENST00000556467 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
CASC1-211ENST00000556467 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
CASC1-211ENST00000556467 RAPGEF2Q9Y4G8 1499 aa12.09□□□□□ -0.47
CASC1-211ENST00000556467 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
CASC1-211ENST00000556467 CARMIL2Q6F5E8 1435 aa12.08□□□□□ -0.48
CASC1-211ENST00000556467 IQGAP2Q13576 1575 aa12.08□□□□□ -0.48
CASC1-211ENST00000556467 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
CASC1-211ENST00000556467 CTTNBP2Q8WZ74 1663 aa12.04□□□□□ -0.48
CASC1-211ENST00000556467 CHRDL2Q6WN34 429 aa12.04□□□□□ -0.48
CASC1-211ENST00000556467 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
CASC1-211ENST00000556467 PTPRGP23470 1445 aa12.02□□□□□ -0.49
CASC1-211ENST00000556467 POLA2Q14181 598 aa12.01□□□□□ -0.49
CASC1-211ENST00000556467 UGGT2Q9NYU1 1516 aa12□□□□□ -0.49
CASC1-211ENST00000556467 ADCY10Q96PN6 1610 aa12□□□□□ -0.49
CASC1-211ENST00000556467 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
CASC1-211ENST00000556467 MAPKBP1O60336 1514 aa11.98□□□□□ -0.49
CASC1-211ENST00000556467 EEA1Q15075 1411 aa11.98□□□□□ -0.49
CASC1-211ENST00000556467 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
CASC1-211ENST00000556467 TTBK1Q5TCY1 1321 aaPredicted RBP11.97□□□□□ -0.49
CASC1-211ENST00000556467 FAM9AQ8IZU1 332 aaPredicted RBP11.97□□□□□ -0.49
CASC1-211ENST00000556467 GOLGA3Q08378 1498 aa11.96□□□□□ -0.49
CASC1-211ENST00000556467 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
CASC1-211ENST00000556467 DISP1Q96F81 1524 aa11.96□□□□□ -0.5
CASC1-211ENST00000556467 KIAA0556O60303 1618 aa11.94□□□□□ -0.5
CASC1-211ENST00000556467 UHRF1BP1LA0JNW5 1464 aa11.93□□□□□ -0.5
CASC1-211ENST00000556467 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
CASC1-211ENST00000556467 UACAQ9BZF9 1416 aa11.93□□□□□ -0.5
CASC1-211ENST00000556467 ABCC2Q92887 1545 aa11.92□□□□□ -0.5
CASC1-211ENST00000556467 FAM69CQ0P6D2 419 aa11.92□□□□□ -0.5
CASC1-211ENST00000556467 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
CASC1-211ENST00000556467 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
CASC1-211ENST00000556467 PLB1Q6P1J6 1458 aa11.89□□□□□ -0.51
CASC1-211ENST00000556467 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
CASC1-211ENST00000556467 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
CASC1-211ENST00000556467 KDM5BQ9UGL1 1544 aa11.86□□□□□ -0.51
CASC1-211ENST00000556467 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
CASC1-211ENST00000556467 ASXL2Q76L83 1435 aa11.86□□□□□ -0.51
CASC1-211ENST00000556467 KIF21BO75037 1637 aa11.85□□□□□ -0.51
CASC1-211ENST00000556467 GLI2P10070 1586 aa11.84□□□□□ -0.51
CASC1-211ENST00000556467 ABCA8O94911 1581 aa11.82□□□□□ -0.52
CASC1-211ENST00000556467 SAMD9Q5K651 1589 aa11.81□□□□□ -0.52
CASC1-211ENST00000556467 KDM6BO15054 1643 aa11.79□□□□□ -0.52
CASC1-211ENST00000556467 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
CASC1-211ENST00000556467 WDR7Q9Y4E6 1490 aa11.78□□□□□ -0.52
CASC1-211ENST00000556467 EPRSP07814 1512 aaKnown RBP11.78□□□□□ -0.52
CASC1-211ENST00000556467 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
CASC1-211ENST00000556467 MAP3K4Q9Y6R4 1608 aa11.77□□□□□ -0.53
CASC1-211ENST00000556467 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
CASC1-211ENST00000556467 RAPGEF6Q8TEU7 1601 aa11.76□□□□□ -0.53
CASC1-211ENST00000556467 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
CASC1-211ENST00000556467 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
CASC1-211ENST00000556467 CFAP43Q8NDM7 1665 aa11.75□□□□□ -0.53
CASC1-211ENST00000556467 RANGAP1P46060 587 aaPredicted RBP11.75□□□□□ -0.53
CASC1-211ENST00000556467 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
CASC1-211ENST00000556467 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
CASC1-211ENST00000556467 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
CASC1-211ENST00000556467 ATP10BO94823 1461 aa11.71□□□□□ -0.53
CASC1-211ENST00000556467 FHOD3Q2V2M9 1422 aa11.7□□□□□ -0.54
CASC1-211ENST00000556467 REM2Q8IYK8 340 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms